RNA–Protein interactions for RNA: ENST00000519533.1

CHRAC1-203, Transcript of chromatin accessibility complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CHRAC1, Length 1,678 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRAC1-203ENST00000519533 MTHFSP49914 203 aa28.56■■■□□ 2.16
CHRAC1-203ENST00000519533 TTC21AQ8NDW8 1320 aa28.56■■■□□ 2.16
CHRAC1-203ENST00000519533 BLMP54132 1417 aaPredicted RBP28.56■■■□□ 2.16
CHRAC1-203ENST00000519533 COG3Q96JB2 828 aa28.55■■■□□ 2.16
CHRAC1-203ENST00000519533 NME9Q86XW9 330 aa28.54■■■□□ 2.16
CHRAC1-203ENST00000519533 C19orf44Q9H6X5 657 aa28.54■■■□□ 2.16
CHRAC1-203ENST00000519533 MAP2P11137 1827 aaKnown RBP28.53■■■□□ 2.16
CHRAC1-203ENST00000519533 DCCP43146 1447 aa28.52■■■□□ 2.16
CHRAC1-203ENST00000519533 SSH2Q76I76 1423 aa28.52■■■□□ 2.16
CHRAC1-203ENST00000519533 TMEM94Q12767 1356 aa28.52■■■□□ 2.16
CHRAC1-203ENST00000519533 ADAMTS8Q9UP79 889 aa28.51■■■□□ 2.16
CHRAC1-203ENST00000519533 PHF8Q9UPP1 1060 aa28.51■■■□□ 2.16
CHRAC1-203ENST00000519533 SHPRHQ149N8 1683 aa28.51■■■□□ 2.16
CHRAC1-203ENST00000519533 DMRT2Q9Y5R5 561 aa28.5■■■□□ 2.15
CHRAC1-203ENST00000519533 AATKQ6ZMQ8 1374 aa28.48■■■□□ 2.15
CHRAC1-203ENST00000519533 KIF1AQ12756 1690 aa28.47■■■□□ 2.15
CHRAC1-203ENST00000519533 ESCO1Q5FWF5 840 aa28.46■■■□□ 2.15
CHRAC1-203ENST00000519533 OVOS2A0A0J9YW53 1432 aa28.46■■■□□ 2.15
CHRAC1-203ENST00000519533 OVOS2Q6IE36 1432 aa28.46■■■□□ 2.15
CHRAC1-203ENST00000519533 ATF3P18847 181 aa28.45■■■□□ 2.15
CHRAC1-203ENST00000519533 AEBP2Q6ZN18 517 aaPredicted RBP28.45■■■□□ 2.14
CHRAC1-203ENST00000519533 MSH6P52701 1360 aa28.43■■■□□ 2.14
CHRAC1-203ENST00000519533 XIRP1Q702N8 1843 aaKnown RBP28.43■■■□□ 2.14
CHRAC1-203ENST00000519533 NUDCQ9Y266 331 aa28.42■■■□□ 2.14
CHRAC1-203ENST00000519533 PIK3C2AO00443 1686 aa28.42■■■□□ 2.14
CHRAC1-203ENST00000519533 ZRANB1Q9UGI0 708 aa28.42■■■□□ 2.14
CHRAC1-203ENST00000519533 USP54Q70EL1 1684 aa28.41■■■□□ 2.14
CHRAC1-203ENST00000519533 SMG6Q86US8 1419 aaKnown RBP28.41■■■□□ 2.14
CHRAC1-203ENST00000519533 C1orf167Q5SNV9 1468 aa28.41■■■□□ 2.14
CHRAC1-203ENST00000519533 USP31Q70CQ4 1352 aa28.41■■■□□ 2.14
CHRAC1-203ENST00000519533 CADPS2Q86UW7 1296 aa28.41■■■□□ 2.14
CHRAC1-203ENST00000519533 PNPLA6Q8IY17 1366 aa28.4■■■□□ 2.14
CHRAC1-203ENST00000519533 POLKQ9UBT6 870 aa28.4■■■□□ 2.14
CHRAC1-203ENST00000519533 COL3A1P02461 1466 aaPredicted RBP28.4■■■□□ 2.14
CHRAC1-203ENST00000519533 CDK12Q9NYV4 1490 aaPredicted RBP28.39■■■□□ 2.13
CHRAC1-203ENST00000519533 LRRC7Q96NW7 1537 aa28.38■■■□□ 2.13
CHRAC1-203ENST00000519533 PSME1Q06323 249 aa28.38■■■□□ 2.13
CHRAC1-203ENST00000519533 MST1RQ04912 1400 aa28.37■■■□□ 2.13
CHRAC1-203ENST00000519533 ZNF335Q9H4Z2 1342 aaPredicted RBP28.37■■■□□ 2.13
CHRAC1-203ENST00000519533 DIAPH1O60610 1272 aaKnown RBP28.35■■■□□ 2.13
CHRAC1-203ENST00000519533 ORAI2Q96SN7 254 aa28.35■■■□□ 2.13
CHRAC1-203ENST00000519533 PPM1GO15355 546 aaPredicted RBP28.34■■■□□ 2.13
CHRAC1-203ENST00000519533 PAK3O75914 559 aaPredicted RBP28.34■■■□□ 2.13
CHRAC1-203ENST00000519533 NGEFQ8N5V2 710 aa28.33■■■□□ 2.13
CHRAC1-203ENST00000519533 PDE3BQ13370 1112 aa28.32■■■□□ 2.12
CHRAC1-203ENST00000519533 ABTB2Q8N961 1025 aa28.32■■■□□ 2.12
CHRAC1-203ENST00000519533 NLRP6P59044 892 aa28.32■■■□□ 2.12
CHRAC1-203ENST00000519533 EMILIN1Q9Y6C2 1016 aa28.32■■■□□ 2.12
CHRAC1-203ENST00000519533 U2AF1L5P0DN76 240 aaPredicted RBP28.31■■■□□ 2.12
CHRAC1-203ENST00000519533 U2AF1Q01081 240 aaKnown RBP eCLIP28.31■■■□□ 2.12
CHRAC1-203ENST00000519533 MARF1Q9Y4F3 1742 aaKnown RBP28.31■■■□□ 2.12
CHRAC1-203ENST00000519533 FBLN1P23142 703 aa28.3■■■□□ 2.12
CHRAC1-203ENST00000519533 CCDC146Q8IYE0 955 aa28.3■■■□□ 2.12
CHRAC1-203ENST00000519533 RUNDC1Q96C34 613 aa28.29■■■□□ 2.12
CHRAC1-203ENST00000519533 U2SURPO15042 1029 aaKnown RBP28.29■■■□□ 2.12
CHRAC1-203ENST00000519533 FOXO3O43524 673 aa28.29■■■□□ 2.12
CHRAC1-203ENST00000519533 RRS1Q15050 365 aaKnown RBP28.29■■■□□ 2.12
CHRAC1-203ENST00000519533 SALL2Q9Y467 1007 aaPredicted RBP28.29■■■□□ 2.12
CHRAC1-203ENST00000519533 SENP3-EIF4A1A0A087X0R7 540 aa28.28■■■□□ 2.12
CHRAC1-203ENST00000519533 PNNQ9H307 717 aaKnown RBP28.28■■■□□ 2.12
CHRAC1-203ENST00000519533 TRPM3Q9HCF6 1732 aaPredicted RBP28.27■■■□□ 2.12
CHRAC1-203ENST00000519533 GTF3C3Q9Y5Q9 886 aa28.27■■■□□ 2.12
CHRAC1-203ENST00000519533 APAF1O14727 1248 aa28.24■■■□□ 2.11
CHRAC1-203ENST00000519533 KRT28Q7Z3Y7 464 aa28.23■■■□□ 2.11
CHRAC1-203ENST00000519533 KIF24Q5T7B8 1368 aa28.21■■■□□ 2.11
CHRAC1-203ENST00000519533 NUTM2GQ5VZR2 741 aa28.21■■■□□ 2.11
CHRAC1-203ENST00000519533 PEAK1Q9H792 1746 aa28.21■■■□□ 2.11
CHRAC1-203ENST00000519533 NPHP3Q7Z494 1330 aa28.21■■■□□ 2.11
CHRAC1-203ENST00000519533 SBNO1A3KN83 1393 aa28.21■■■□□ 2.11
CHRAC1-203ENST00000519533 SOX12O15370 315 aa28.2■■■□□ 2.11
CHRAC1-203ENST00000519533 IQSEC2Q5JU85 1478 aa28.2■■■□□ 2.11
CHRAC1-203ENST00000519533 FLT4P35916 1363 aa28.2■■■□□ 2.1
CHRAC1-203ENST00000519533 IL13P35225 146 aa28.19■■■□□ 2.1
CHRAC1-203ENST00000519533 MAP3K19Q56UN5 1328 aa28.19■■■□□ 2.1
CHRAC1-203ENST00000519533 FCHSD2O94868 740 aa28.18■■■□□ 2.1
CHRAC1-203ENST00000519533 KCNH5Q8NCM2 988 aa28.18■■■□□ 2.1
CHRAC1-203ENST00000519533 MAPK8IP3Q9UPT6 1336 aa28.18■■■□□ 2.1
CHRAC1-203ENST00000519533 NEFMP07197 916 aa28.17■■■□□ 2.1
CHRAC1-203ENST00000519533 NCBP3Q53F19 620 aaKnown RBP28.17■■■□□ 2.1
CHRAC1-203ENST00000519533 ALS2Q96Q42 1657 aa28.17■■■□□ 2.1
CHRAC1-203ENST00000519533 LTN1O94822 1766 aa28.17■■■□□ 2.1
CHRAC1-203ENST00000519533 AMPHP49418 695 aa28.16■■■□□ 2.1
CHRAC1-203ENST00000519533 XPCQ01831 940 aaPredicted RBP28.16■■■□□ 2.1
CHRAC1-203ENST00000519533 TCP11L2Q8N4U5 519 aa28.16■■■□□ 2.1
CHRAC1-203ENST00000519533 ZNF521Q96K83 1311 aa28.15■■■□□ 2.1
CHRAC1-203ENST00000519533 RTL1A6NKG5 1358 aa28.13■■■□□ 2.09
CHRAC1-203ENST00000519533 SLAIN2Q9P270 581 aa28.13■■■□□ 2.09
CHRAC1-203ENST00000519533 SLIT3O75094 1523 aa28.13■■■□□ 2.09
CHRAC1-203ENST00000519533 NFAT5O94916 1531 aa28.13■■■□□ 2.09
CHRAC1-203ENST00000519533 GOLGA2Q08379 1002 aa28.13■■■□□ 2.09
CHRAC1-203ENST00000519533 PLEKHF1Q96S99 279 aa28.13■■■□□ 2.09
CHRAC1-203ENST00000519533 NEFLP07196 543 aa28.12■■■□□ 2.09
CHRAC1-203ENST00000519533 LMOD2Q6P5Q4 547 aa28.12■■■□□ 2.09
CHRAC1-203ENST00000519533 EIF4A2Q14240 407 aaKnown RBP28.11■■■□□ 2.09
CHRAC1-203ENST00000519533 BRINP3Q76B58 766 aa28.1■■■□□ 2.09
CHRAC1-203ENST00000519533 PHRF1Q9P1Y6 1649 aaKnown RBP28.1■■■□□ 2.09
CHRAC1-203ENST00000519533 CCDC27Q2M243 656 aa28.1■■■□□ 2.09
CHRAC1-203ENST00000519533 HSP90AB2PQ58FF8 381 aa28.1■■■□□ 2.09
CHRAC1-203ENST00000519533 RSPH6AQ9H0K4 717 aa28.1■■■□□ 2.09
CHRAC1-203ENST00000519533 RGPD1P0DJD0 1748 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms