RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 RRS1Q15050 365 aaKnown RBP13.98□□□□□ -0.17
PCDHGB4-201ENST00000519479 ZNF692Q9BU19 519 aaPredicted RBP13.98□□□□□ -0.17
PCDHGB4-201ENST00000519479 TSPYL4Q9UJ04 414 aa13.97□□□□□ -0.17
PCDHGB4-201ENST00000519479 C1orf115Q9H7X2 142 aa13.97□□□□□ -0.17
PCDHGB4-201ENST00000519479 NUTM2GQ5VZR2 741 aa13.97□□□□□ -0.17
PCDHGB4-201ENST00000519479 SULT6B1Q6IMI4 303 aa13.97□□□□□ -0.17
PCDHGB4-201ENST00000519479 CCDC61Q9Y6R9 512 aa13.97□□□□□ -0.17
PCDHGB4-201ENST00000519479 PLXNC1O60486 1568 aa13.96□□□□□ -0.17
PCDHGB4-201ENST00000519479 RNF123Q5XPI4 1314 aa13.96□□□□□ -0.17
PCDHGB4-201ENST00000519479 KDM5CP41229 1560 aa13.96□□□□□ -0.17
PCDHGB4-201ENST00000519479 KIAA1211Q6ZU35 1233 aa13.96□□□□□ -0.17
PCDHGB4-201ENST00000519479 CSB-PGBD3P0DP91 1061 aa13.96□□□□□ -0.17
PCDHGB4-201ENST00000519479 NLRP6P59044 892 aa13.96□□□□□ -0.17
PCDHGB4-201ENST00000519479 SSH1Q8WYL5 1049 aa13.96□□□□□ -0.17
PCDHGB4-201ENST00000519479 NUDT16Q96DE0 195 aaKnown RBP13.96□□□□□ -0.17
PCDHGB4-201ENST00000519479 THUMPD2Q9BTF0 503 aaKnown RBP13.96□□□□□ -0.17
PCDHGB4-201ENST00000519479 GOLGA6L3A6NEY3 463 aa13.96□□□□□ -0.18
PCDHGB4-201ENST00000519479 RIMS2Q9UQ26 1411 aa13.96□□□□□ -0.18
PCDHGB4-201ENST00000519479 GLI2P10070 1586 aa13.95□□□□□ -0.18
PCDHGB4-201ENST00000519479 PIK3C2GO75747 1445 aa13.95□□□□□ -0.18
PCDHGB4-201ENST00000519479 KDM5DQ9BY66 1539 aa13.95□□□□□ -0.18
PCDHGB4-201ENST00000519479 FKBP5Q13451 457 aaPredicted RBP13.95□□□□□ -0.18
PCDHGB4-201ENST00000519479 NSD2O96028 1365 aa13.94□□□□□ -0.18
PCDHGB4-201ENST00000519479 NFE2L2Q16236 605 aa13.94□□□□□ -0.18
PCDHGB4-201ENST00000519479 TMEM57Q8N5G2 664 aa13.94□□□□□ -0.18
PCDHGB4-201ENST00000519479 PTMAP06454 111 aaKnown RBP13.93□□□□□ -0.18
PCDHGB4-201ENST00000519479 EIF2S2P20042 333 aaKnown RBP13.93□□□□□ -0.18
PCDHGB4-201ENST00000519479 NME9Q86XW9 330 aa13.93□□□□□ -0.18
PCDHGB4-201ENST00000519479 ST18O60284 1047 aa13.93□□□□□ -0.18
PCDHGB4-201ENST00000519479 IGHDP01880 384 aa13.93□□□□□ -0.18
PCDHGB4-201ENST00000519479 TEFQ10587 303 aa13.93□□□□□ -0.18
PCDHGB4-201ENST00000519479 CHMP5Q9NZZ3 219 aa13.93□□□□□ -0.18
PCDHGB4-201ENST00000519479 POLR3AO14802 1390 aaPredicted RBP13.93□□□□□ -0.18
PCDHGB4-201ENST00000519479 FRAT2O75474 233 aaPredicted RBP13.93□□□□□ -0.18
PCDHGB4-201ENST00000519479 SPINK5Q9NQ38 1064 aaPredicted RBP13.93□□□□□ -0.18
PCDHGB4-201ENST00000519479 PTMSP20962 102 aa13.92□□□□□ -0.18
PCDHGB4-201ENST00000519479 NOL8Q76FK4 1167 aaKnown RBP13.92□□□□□ -0.18
PCDHGB4-201ENST00000519479 RILPL2Q969X0 211 aa13.92□□□□□ -0.18
PCDHGB4-201ENST00000519479 EMILIN1Q9Y6C2 1016 aa13.92□□□□□ -0.18
PCDHGB4-201ENST00000519479 ANKRD36BQ8N2N9 1353 aa13.92□□□□□ -0.18
PCDHGB4-201ENST00000519479 PRKCSHP14314 528 aaPredicted RBP13.92□□□□□ -0.18
PCDHGB4-201ENST00000519479 DDX11L8A8MPP1 907 aa13.91□□□□□ -0.18
PCDHGB4-201ENST00000519479 FYB1O15117 783 aa13.91□□□□□ -0.18
PCDHGB4-201ENST00000519479 FGD1P98174 961 aa13.91□□□□□ -0.18
PCDHGB4-201ENST00000519479 AMOTL2Q9Y2J4 779 aa13.91□□□□□ -0.18
PCDHGB4-201ENST00000519479 FBLN1P23142 703 aa13.91□□□□□ -0.18
PCDHGB4-201ENST00000519479 ABCC11Q96J66 1382 aa13.91□□□□□ -0.18
PCDHGB4-201ENST00000519479 ZNF428Q96B54 188 aa13.9□□□□□ -0.18
PCDHGB4-201ENST00000519479 NPC1L1Q9UHC9 1359 aa13.9□□□□□ -0.18
PCDHGB4-201ENST00000519479 CDC42BPBQ9Y5S2 1711 aa13.9□□□□□ -0.18
PCDHGB4-201ENST00000519479 PLA2R1Q13018 1463 aa13.9□□□□□ -0.18
PCDHGB4-201ENST00000519479 WASLO00401 505 aaPredicted RBP13.9□□□□□ -0.18
PCDHGB4-201ENST00000519479 GCC1Q96CN9 775 aa13.9□□□□□ -0.18
PCDHGB4-201ENST00000519479 TRIM27P14373 513 aa13.9□□□□□ -0.19
PCDHGB4-201ENST00000519479 HDAC5Q9UQL6 1122 aa13.89□□□□□ -0.19
PCDHGB4-201ENST00000519479 ESCO1Q5FWF5 840 aa13.89□□□□□ -0.19
PCDHGB4-201ENST00000519479 C1orf141Q5JVX7 400 aa13.89□□□□□ -0.19
PCDHGB4-201ENST00000519479 REC8O95072 547 aa13.89□□□□□ -0.19
PCDHGB4-201ENST00000519479 NPATQ14207 1427 aa13.89□□□□□ -0.19
PCDHGB4-201ENST00000519479 ABTB2Q8N961 1025 aa13.88□□□□□ -0.19
PCDHGB4-201ENST00000519479 CDC45O75419 566 aa13.88□□□□□ -0.19
PCDHGB4-201ENST00000519479 PLCB2Q00722 1185 aa13.88□□□□□ -0.19
PCDHGB4-201ENST00000519479 DCTN1Q14203 1278 aa13.88□□□□□ -0.19
PCDHGB4-201ENST00000519479 SLC4A2P04920 1241 aa13.88□□□□□ -0.19
PCDHGB4-201ENST00000519479 CHD1LQ86WJ1 897 aa13.88□□□□□ -0.19
PCDHGB4-201ENST00000519479 GAS2L2Q8NHY3 880 aa13.88□□□□□ -0.19
PCDHGB4-201ENST00000519479 BLMP54132 1417 aaPredicted RBP13.87□□□□□ -0.19
PCDHGB4-201ENST00000519479 INTS3Q68E01 1043 aaKnown RBP13.87□□□□□ -0.19
PCDHGB4-201ENST00000519479 FOXD4L5Q5VV16 416 aaPredicted RBP13.86□□□□□ -0.19
PCDHGB4-201ENST00000519479 FOXD4L4Q8WXT5 416 aaPredicted RBP13.86□□□□□ -0.19
PCDHGB4-201ENST00000519479 PUS7Q96PZ0 661 aaKnown RBP13.86□□□□□ -0.19
PCDHGB4-201ENST00000519479 TBX22Q9Y458 520 aa13.86□□□□□ -0.19
PCDHGB4-201ENST00000519479 GPATCH3Q96I76 525 aa13.86□□□□□ -0.19
PCDHGB4-201ENST00000519479 CCDC27Q2M243 656 aa13.86□□□□□ -0.19
PCDHGB4-201ENST00000519479 ALDH1L2Q3SY69 923 aa13.86□□□□□ -0.19
PCDHGB4-201ENST00000519479 NAP1L2Q9ULW6 460 aaPredicted RBP13.86□□□□□ -0.19
PCDHGB4-201ENST00000519479 PCDHB15Q9Y5E8 787 aa13.86□□□□□ -0.19
PCDHGB4-201ENST00000519479 ZMYM4Q5VZL5 1548 aa13.85□□□□□ -0.19
PCDHGB4-201ENST00000519479 ARHGAP31Q2M1Z3 1444 aa13.85□□□□□ -0.19
PCDHGB4-201ENST00000519479 INSRP06213 1382 aa13.85□□□□□ -0.19
PCDHGB4-201ENST00000519479 TNNQ9UQP3 1299 aa13.85□□□□□ -0.19
PCDHGB4-201ENST00000519479 IFT57Q9NWB7 429 aa13.84□□□□□ -0.19
PCDHGB4-201ENST00000519479 ZNF330Q9Y3S2 320 aaPredicted RBP13.84□□□□□ -0.19
PCDHGB4-201ENST00000519479 DDX49Q9Y6V7 483 aaKnown RBP13.84□□□□□ -0.19
PCDHGB4-201ENST00000519479 DIP2BQ9P265 1576 aa13.84□□□□□ -0.19
PCDHGB4-201ENST00000519479 MCM10Q7L590 875 aa13.84□□□□□ -0.19
PCDHGB4-201ENST00000519479 C9orf78Q9NZ63 289 aaPredicted RBP13.83□□□□□ -0.19
PCDHGB4-201ENST00000519479 CCDC30Q5VVM6 783 aa13.83□□□□□ -0.2
PCDHGB4-201ENST00000519479 GOLGA6L4A6NEF3 574 aa13.83□□□□□ -0.2
PCDHGB4-201ENST00000519479 RLBP1P12271 317 aa13.83□□□□□ -0.2
PCDHGB4-201ENST00000519479 ANO2Q9NQ90 1003 aa13.83□□□□□ -0.2
PCDHGB4-201ENST00000519479 BCORL1Q5H9F3 1711 aa13.83□□□□□ -0.2
PCDHGB4-201ENST00000519479 A0A1W2PP64 1363 aa13.83□□□□□ -0.2
PCDHGB4-201ENST00000519479 CROCC2H7BZ55 1655 aa13.82□□□□□ -0.2
PCDHGB4-201ENST00000519479 CHMP3Q9Y3E7 222 aa13.82□□□□□ -0.2
PCDHGB4-201ENST00000519479 IL16Q14005 1332 aa13.82□□□□□ -0.2
PCDHGB4-201ENST00000519479 UBTFL1P0CB47 393 aaPredicted RBP13.82□□□□□ -0.2
PCDHGB4-201ENST00000519479 GNAI3P08754 354 aa13.81□□□□□ -0.2
PCDHGB4-201ENST00000519479 CADPS2Q86UW7 1296 aa13.81□□□□□ -0.2
PCDHGB4-201ENST00000519479 ANO8Q9HCE9 1232 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms