RNA–Protein interactions for RNA: ENST00000519436.1

ARFGEF1-206, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARFGEF1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-206ENST00000519436 VPS72Q15906 364 aa30.44■■■□□ 2.46
ARFGEF1-206ENST00000519436 ITSN1Q15811 1721 aa30.43■■■□□ 2.46
ARFGEF1-206ENST00000519436 ABCA3Q99758 1704 aa30.43■■■□□ 2.46
ARFGEF1-206ENST00000519436 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.43■■■□□ 2.46
ARFGEF1-206ENST00000519436 RALGAPBQ86X10 1494 aa30.43■■■□□ 2.46
ARFGEF1-206ENST00000519436 TOPAZ1Q8N9V7 1692 aa30.42■■■□□ 2.46
ARFGEF1-206ENST00000519436 GLI3P10071 1580 aa30.38■■■□□ 2.45
ARFGEF1-206ENST00000519436 PPIP5K1Q6PFW1 1433 aa30.38■■■□□ 2.45
ARFGEF1-206ENST00000519436 ONECUT3O60422 494 aaPredicted RBP30.37■■■□□ 2.45
ARFGEF1-206ENST00000519436 CABP1Q9NZU7 370 aa30.37■■■□□ 2.45
ARFGEF1-206ENST00000519436 BTG4Q9NY30 223 aa30.36■■■□□ 2.45
ARFGEF1-206ENST00000519436 ATAD2Q6PL18 1390 aa30.36■■■□□ 2.45
ARFGEF1-206ENST00000519436 EVC2Q86UK5 1308 aa30.35■■■□□ 2.45
ARFGEF1-206ENST00000519436 QRICH2Q9H0J4 1663 aa30.35■■■□□ 2.45
ARFGEF1-206ENST00000519436 NUTM2GQ5VZR2 741 aa30.34■■■□□ 2.45
ARFGEF1-206ENST00000519436 NWD2Q9ULI1 1742 aa30.33■■■□□ 2.45
ARFGEF1-206ENST00000519436 TONSLQ96HA7 1378 aa30.33■■■□□ 2.45
ARFGEF1-206ENST00000519436 CRYBG1Q9Y4K1 1723 aa30.33■■■□□ 2.45
ARFGEF1-206ENST00000519436 PLCH1Q4KWH8 1693 aa30.32■■■□□ 2.44
ARFGEF1-206ENST00000519436 ABTB2Q8N961 1025 aa30.31■■■□□ 2.44
ARFGEF1-206ENST00000519436 SEPT12Q8IYM1 358 aa30.3■■■□□ 2.44
ARFGEF1-206ENST00000519436 PRDM11Q9NQV5 511 aa30.3■■■□□ 2.44
ARFGEF1-206ENST00000519436 BRD4O60885 1362 aaPredicted RBP30.29■■■□□ 2.44
ARFGEF1-206ENST00000519436 CARD11Q9BXL7 1154 aa30.29■■■□□ 2.44
ARFGEF1-206ENST00000519436 KIAA0232Q92628 1395 aa30.28■■■□□ 2.44
ARFGEF1-206ENST00000519436 CCDC9Q9Y3X0 531 aaKnown RBP30.28■■■□□ 2.44
ARFGEF1-206ENST00000519436 COL14A1Q05707 1796 aaKnown RBP30.27■■■□□ 2.44
ARFGEF1-206ENST00000519436 USP19O94966 1318 aa30.26■■■□□ 2.44
ARFGEF1-206ENST00000519436 ZC3H6P61129 1189 aaKnown RBP30.26■■■□□ 2.43
ARFGEF1-206ENST00000519436 USP6P35125 1406 aa30.25■■■□□ 2.43
ARFGEF1-206ENST00000519436 SSH2Q76I76 1423 aa30.25■■■□□ 2.43
ARFGEF1-206ENST00000519436 SBNO2Q9Y2G9 1366 aa30.25■■■□□ 2.43
ARFGEF1-206ENST00000519436 NRAPQ86VF7 1730 aa30.25■■■□□ 2.43
ARFGEF1-206ENST00000519436 CHRNA2Q15822 529 aa30.24■■■□□ 2.43
ARFGEF1-206ENST00000519436 NLRP13Q86W25 1043 aa30.24■■■□□ 2.43
ARFGEF1-206ENST00000519436 SPATA31A5Q5VU36 1347 aa30.22■■■□□ 2.43
ARFGEF1-206ENST00000519436 SPATA31A7Q8IWB4 1347 aa30.22■■■□□ 2.43
ARFGEF1-206ENST00000519436 EP400Q96L91 3159 aa30.21■■■□□ 2.43
ARFGEF1-206ENST00000519436 GCP02774 474 aa30.21■■■□□ 2.43
ARFGEF1-206ENST00000519436 CPDO75976 1380 aa30.2■■■□□ 2.43
ARFGEF1-206ENST00000519436 CCDC125Q86Z20 511 aa30.2■■■□□ 2.43
ARFGEF1-206ENST00000519436 ZNF692Q9BU19 519 aaPredicted RBP30.2■■■□□ 2.43
ARFGEF1-206ENST00000519436 PHRF1Q9P1Y6 1649 aaKnown RBP30.2■■■□□ 2.43
ARFGEF1-206ENST00000519436 FAM98CQ17RN3 349 aaKnown RBP30.19■■■□□ 2.42
ARFGEF1-206ENST00000519436 NLRP6P59044 892 aa30.16■■■□□ 2.42
ARFGEF1-206ENST00000519436 KRT27Q7Z3Y8 459 aa30.16■■■□□ 2.42
ARFGEF1-206ENST00000519436 CPSF1Q10570 1443 aaKnown RBP30.15■■■□□ 2.42
ARFGEF1-206ENST00000519436 NRKQ7Z2Y5 1582 aa30.15■■■□□ 2.42
ARFGEF1-206ENST00000519436 SPATA31A1Q5TZJ5 1347 aa30.14■■■□□ 2.42
ARFGEF1-206ENST00000519436 TTC21BQ7Z4L5 1316 aa30.14■■■□□ 2.42
ARFGEF1-206ENST00000519436 STRN4Q9NRL3 753 aa30.12■■■□□ 2.41
ARFGEF1-206ENST00000519436 BRWD3Q6RI45 1802 aa30.12■■■□□ 2.41
ARFGEF1-206ENST00000519436 CAMTA1Q9Y6Y1 1673 aa30.11■■■□□ 2.41
ARFGEF1-206ENST00000519436 PUS7Q96PZ0 661 aaKnown RBP30.09■■■□□ 2.41
ARFGEF1-206ENST00000519436 TESK2Q96S53 571 aa30.09■■■□□ 2.41
ARFGEF1-206ENST00000519436 BLMP54132 1417 aaPredicted RBP30.08■■■□□ 2.41
ARFGEF1-206ENST00000519436 EVA1CP58658 441 aa30.08■■■□□ 2.41
ARFGEF1-206ENST00000519436 SLIT3O75094 1523 aa30.07■■■□□ 2.4
ARFGEF1-206ENST00000519436 TTC21AQ8NDW8 1320 aa30.07■■■□□ 2.4
ARFGEF1-206ENST00000519436 A0A0G2JS52 829 aa30.07■■■□□ 2.4
ARFGEF1-206ENST00000519436 MYT1Q01538 1121 aa30.07■■■□□ 2.4
ARFGEF1-206ENST00000519436 ST20-MTHFSA0A0A6YYL1 179 aa30.06■■■□□ 2.4
ARFGEF1-206ENST00000519436 LARP1Q6PKG0 1096 aaKnown RBP30.06■■■□□ 2.4
ARFGEF1-206ENST00000519436 KTN1Q86UP2 1357 aaKnown RBP30.05■■■□□ 2.4
ARFGEF1-206ENST00000519436 LMO7Q8WWI1 1683 aa30.05■■■□□ 2.4
ARFGEF1-206ENST00000519436 SLC12A5Q9H2X9 1139 aa30.05■■■□□ 2.4
ARFGEF1-206ENST00000519436 CD163L1Q9NR16 1453 aa30.05■■■□□ 2.4
ARFGEF1-206ENST00000519436 PIK3C2AO00443 1686 aa30.04■■■□□ 2.4
ARFGEF1-206ENST00000519436 AATKQ6ZMQ8 1374 aa30.03■■■□□ 2.4
ARFGEF1-206ENST00000519436 BARGINQ6ZT62 677 aa30.03■■■□□ 2.4
ARFGEF1-206ENST00000519436 THSD7AQ9UPZ6 1657 aa30.01■■■□□ 2.4
ARFGEF1-206ENST00000519436 AKAP12Q02952 1782 aa30.01■■■□□ 2.39
ARFGEF1-206ENST00000519436 TMC1Q8TDI8 760 aa30.01■■■□□ 2.39
ARFGEF1-206ENST00000519436 ARHGEF25Q86VW2 580 aa30■■■□□ 2.39
ARFGEF1-206ENST00000519436 USP35Q9P2H5 1018 aa30■■■□□ 2.39
ARFGEF1-206ENST00000519436 DEFB132Q7Z7B7 95 aa29.99■■■□□ 2.39
ARFGEF1-206ENST00000519436 KCNH5Q8NCM2 988 aa29.99■■■□□ 2.39
ARFGEF1-206ENST00000519436 TIMELESSQ9UNS1 1208 aa29.99■■■□□ 2.39
ARFGEF1-206ENST00000519436 COL5A2P05997 1499 aaPredicted RBP29.99■■■□□ 2.39
ARFGEF1-206ENST00000519436 CLSPNQ9HAW4 1339 aa29.98■■■□□ 2.39
ARFGEF1-206ENST00000519436 FAM182BQ5T319 152 aa29.98■■■□□ 2.39
ARFGEF1-206ENST00000519436 TCP11L2Q8N4U5 519 aa29.98■■■□□ 2.39
ARFGEF1-206ENST00000519436 PCGF6Q9BYE7 350 aa29.98■■■□□ 2.39
ARFGEF1-206ENST00000519436 AXIN2Q9Y2T1 843 aa29.98■■■□□ 2.39
ARFGEF1-206ENST00000519436 ZRANB1Q9UGI0 708 aa29.97■■■□□ 2.39
ARFGEF1-206ENST00000519436 USP31Q70CQ4 1352 aa29.97■■■□□ 2.39
ARFGEF1-206ENST00000519436 SLC24A1O60721 1099 aa29.96■■■□□ 2.39
ARFGEF1-206ENST00000519436 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.96■■■□□ 2.39
ARFGEF1-206ENST00000519436 THRAP3Q9Y2W1 955 aaKnown RBP29.96■■■□□ 2.39
ARFGEF1-206ENST00000519436 ZBTB7CA1YPR0 619 aa29.95■■■□□ 2.39
ARFGEF1-206ENST00000519436 SF3B2Q13435 895 aaKnown RBP29.94■■■□□ 2.38
ARFGEF1-206ENST00000519436 HDGFL2Q7Z4V5 671 aaPredicted RBP29.94■■■□□ 2.38
ARFGEF1-206ENST00000519436 NME9Q86XW9 330 aa29.93■■■□□ 2.38
ARFGEF1-206ENST00000519436 TERF2IPQ9NYB0 399 aa29.93■■■□□ 2.38
ARFGEF1-206ENST00000519436 MON2Q7Z3U7 1717 aa29.92■■■□□ 2.38
ARFGEF1-206ENST00000519436 COL18A1P39060 1754 aa29.92■■■□□ 2.38
ARFGEF1-206ENST00000519436 A0A1W2PP64 1363 aa29.91■■■□□ 2.38
ARFGEF1-206ENST00000519436 CRB1P82279 1406 aa29.91■■■□□ 2.38
ARFGEF1-206ENST00000519436 SOX12O15370 315 aa29.91■■■□□ 2.38
ARFGEF1-206ENST00000519436 USP47Q96K76 1375 aa29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms