RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 NUTM2BA6NNL0 878 aaPredicted RBP31.47■■■□□ 2.63
SKP1-206ENST00000519321 NUTM2EB1AL46 878 aaPredicted RBP31.47■■■□□ 2.63
SKP1-206ENST00000519321 NUTM2AQ8IVF1 878 aaPredicted RBP31.47■■■□□ 2.63
SKP1-206ENST00000519321 SLC12A5Q9H2X9 1139 aa31.47■■■□□ 2.63
SKP1-206ENST00000519321 KTN1Q86UP2 1357 aaKnown RBP31.44■■■□□ 2.62
SKP1-206ENST00000519321 LRP6O75581 1613 aa31.43■■■□□ 2.62
SKP1-206ENST00000519321 MEX3CQ5U5Q3 659 aaKnown RBP31.43■■■□□ 2.62
SKP1-206ENST00000519321 CD163L1Q9NR16 1453 aa31.41■■■□□ 2.62
SKP1-206ENST00000519321 SSH2Q76I76 1423 aa31.41■■■□□ 2.62
SKP1-206ENST00000519321 ABTB2Q8N961 1025 aa31.4■■■□□ 2.62
SKP1-206ENST00000519321 MON2Q7Z3U7 1717 aa31.4■■■□□ 2.62
SKP1-206ENST00000519321 HAP1P54257 671 aaPredicted RBP31.39■■■□□ 2.62
SKP1-206ENST00000519321 TTC21AQ8NDW8 1320 aa31.39■■■□□ 2.62
SKP1-206ENST00000519321 PHF23Q9BUL5 403 aaPredicted RBP31.38■■■□□ 2.61
SKP1-206ENST00000519321 TTC21BQ7Z4L5 1316 aa31.38■■■□□ 2.61
SKP1-206ENST00000519321 A0A1W2PP64 1363 aa31.38■■■□□ 2.61
SKP1-206ENST00000519321 ANKRD36BQ8N2N9 1353 aa31.37■■■□□ 2.61
SKP1-206ENST00000519321 NRKQ7Z2Y5 1582 aa31.35■■■□□ 2.61
SKP1-206ENST00000519321 EDC4Q6P2E9 1401 aaKnown RBP31.35■■■□□ 2.61
SKP1-206ENST00000519321 NLRP13Q86W25 1043 aa31.35■■■□□ 2.61
SKP1-206ENST00000519321 POLR3GLQ9BT43 218 aa31.35■■■□□ 2.61
SKP1-206ENST00000519321 ADAMTS2O95450 1211 aa31.34■■■□□ 2.61
SKP1-206ENST00000519321 CABLES1Q8TDN4 633 aa31.33■■■□□ 2.61
SKP1-206ENST00000519321 ABCA3Q99758 1704 aa31.32■■■□□ 2.6
SKP1-206ENST00000519321 MYOM1P52179 1685 aa31.32■■■□□ 2.6
SKP1-206ENST00000519321 PLEKHG5O94827 1062 aa31.3■■■□□ 2.6
SKP1-206ENST00000519321 NUTM2GQ5VZR2 741 aa31.3■■■□□ 2.6
SKP1-206ENST00000519321 MARF1Q9Y4F3 1742 aaKnown RBP31.29■■■□□ 2.6
SKP1-206ENST00000519321 NLRP6P59044 892 aa31.29■■■□□ 2.6
SKP1-206ENST00000519321 CRYBG1Q9Y4K1 1723 aa31.29■■■□□ 2.6
SKP1-206ENST00000519321 C11orf95C9JLR9 678 aaPredicted RBP31.28■■■□□ 2.6
SKP1-206ENST00000519321 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.28■■■□□ 2.62e-6■■■□□ 18.1
SKP1-206ENST00000519321 C8orf37Q96NL8 207 aa31.28■■■□□ 2.6
SKP1-206ENST00000519321 PIK3C2AO00443 1686 aa31.28■■■□□ 2.6
SKP1-206ENST00000519321 NGLY1Q96IV0 654 aa31.27■■■□□ 2.6
SKP1-206ENST00000519321 USP19O94966 1318 aa31.26■■■□□ 2.6
SKP1-206ENST00000519321 PHRF1Q9P1Y6 1649 aaKnown RBP31.25■■■□□ 2.59
SKP1-206ENST00000519321 KIF7Q2M1P5 1343 aa31.24■■■□□ 2.59
SKP1-206ENST00000519321 ZNF772Q68DY9 489 aaPredicted RBP31.23■■■□□ 2.59
SKP1-206ENST00000519321 USP31Q70CQ4 1352 aa31.22■■■□□ 2.59
SKP1-206ENST00000519321 AFF2P51816 1311 aa31.22■■■□□ 2.59
SKP1-206ENST00000519321 GCP02774 474 aa31.2■■■□□ 2.59
SKP1-206ENST00000519321 FNBP4Q8N3X1 1017 aaPredicted RBP31.2■■■□□ 2.59
SKP1-206ENST00000519321 SLIT3O75094 1523 aa31.19■■■□□ 2.58
SKP1-206ENST00000519321 NME9Q86XW9 330 aa31.19■■■□□ 2.58
SKP1-206ENST00000519321 KCNH5Q8NCM2 988 aa31.19■■■□□ 2.58
SKP1-206ENST00000519321 USP54Q70EL1 1684 aa31.19■■■□□ 2.58
SKP1-206ENST00000519321 RGS17Q9UGC6 210 aaPredicted RBP31.17■■■□□ 2.58
SKP1-206ENST00000519321 CCDC7Q96M83 1385 aa31.17■■■□□ 2.58
SKP1-206ENST00000519321 CARD14Q9BXL6 1004 aa31.15■■■□□ 2.58
SKP1-206ENST00000519321 PRDM11Q9NQV5 511 aa31.15■■■□□ 2.58
SKP1-206ENST00000519321 NSD3Q9BZ95 1437 aa31.15■■■□□ 2.58
SKP1-206ENST00000519321 PANK3Q9H999 370 aa31.14■■■□□ 2.58
SKP1-206ENST00000519321 USP21Q9UK80 565 aa31.14■■■□□ 2.58
SKP1-206ENST00000519321 COL14A1Q05707 1796 aaKnown RBP31.14■■■□□ 2.58
SKP1-206ENST00000519321 CPDO75976 1380 aa31.14■■■□□ 2.58
SKP1-206ENST00000519321 ZC3H6P61129 1189 aaKnown RBP31.13■■■□□ 2.57
SKP1-206ENST00000519321 COG3Q96JB2 828 aa31.13■■■□□ 2.57
SKP1-206ENST00000519321 WASHC2AQ641Q2 1341 aa31.13■■■□□ 2.57
SKP1-206ENST00000519321 KIAA0232Q92628 1395 aa31.13■■■□□ 2.57
SKP1-206ENST00000519321 SLIT2O94813 1529 aa31.13■■■□□ 2.57
SKP1-206ENST00000519321 FAM83GA6ND36 823 aa31.12■■■□□ 2.57
SKP1-206ENST00000519321 OVOS2A0A0J9YW53 1432 aa31.12■■■□□ 2.57
SKP1-206ENST00000519321 OVOS2Q6IE36 1432 aa31.12■■■□□ 2.57
SKP1-206ENST00000519321 ZRANB1Q9UGI0 708 aa31.11■■■□□ 2.57
SKP1-206ENST00000519321 NWD2Q9ULI1 1742 aa31.1■■■□□ 2.57
SKP1-206ENST00000519321 CGNL1Q0VF96 1302 aa31.1■■■□□ 2.57
SKP1-206ENST00000519321 FYB1O15117 783 aa31.1■■■□□ 2.57
SKP1-206ENST00000519321 PLCH1Q4KWH8 1693 aa31.09■■■□□ 2.57
SKP1-206ENST00000519321 KIF20BQ96Q89 1820 aa31.08■■■□□ 2.57
SKP1-206ENST00000519321 UNC5CLQ8IV45 518 aa31.08■■■□□ 2.57
SKP1-206ENST00000519321 BCL9LQ86UU0 1499 aa31.08■■■□□ 2.57
SKP1-206ENST00000519321 TRPC5Q9UL62 973 aaPredicted RBP31.07■■■□□ 2.56
SKP1-206ENST00000519321 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.07■■■□□ 2.56
SKP1-206ENST00000519321 POTEAQ6S8J7 498 aa31.06■■■□□ 2.56
SKP1-206ENST00000519321 QTRT2Q9H974 415 aaKnown RBP31.06■■■□□ 2.56
SKP1-206ENST00000519321 GGNBP2Q9H3C7 697 aa31.05■■■□□ 2.56
SKP1-206ENST00000519321 BTG4Q9NY30 223 aa31.05■■■□□ 2.56
SKP1-206ENST00000519321 NFAT5O94916 1531 aa31.04■■■□□ 2.56
SKP1-206ENST00000519321 SOX12O15370 315 aa31.04■■■□□ 2.56
SKP1-206ENST00000519321 CHRNA2Q15822 529 aa31.04■■■□□ 2.56
SKP1-206ENST00000519321 ARHGEF25Q86VW2 580 aa31.03■■■□□ 2.56
SKP1-206ENST00000519321 KNSTRNQ9Y448 316 aa31.03■■■□□ 2.56
SKP1-206ENST00000519321 AATKQ6ZMQ8 1374 aa31.02■■■□□ 2.56
SKP1-206ENST00000519321 ATRNO75882 1429 aa31.01■■■□□ 2.55
SKP1-206ENST00000519321 ZBTB7CA1YPR0 619 aa31■■■□□ 2.55
SKP1-206ENST00000519321 NSD2O96028 1365 aa31■■■□□ 2.55
SKP1-206ENST00000519321 RXRBP28702 533 aa30.99■■■□□ 2.55
SKP1-206ENST00000519321 NRAPQ86VF7 1730 aa30.98■■■□□ 2.55
SKP1-206ENST00000519321 LMO7Q8WWI1 1683 aa30.98■■■□□ 2.55
SKP1-206ENST00000519321 RBM6P78332 1123 aaKnown RBP30.98■■■□□ 2.55
SKP1-206ENST00000519321 ABCC6O95255 1503 aa30.98■■■□□ 2.55
SKP1-206ENST00000519321 VPS72Q15906 364 aa30.97■■■□□ 2.55
SKP1-206ENST00000519321 EVA1CP58658 441 aa30.95■■■□□ 2.55
SKP1-206ENST00000519321 CAMTA1Q9Y6Y1 1673 aa30.94■■■□□ 2.54
SKP1-206ENST00000519321 ANKRD26Q9UPS8 1709 aa30.93■■■□□ 2.54
SKP1-206ENST00000519321 LTN1O94822 1766 aa30.93■■■□□ 2.54
SKP1-206ENST00000519321 COL18A1P39060 1754 aa30.93■■■□□ 2.54
SKP1-206ENST00000519321 GJD4Q96KN9 370 aaPredicted RBP30.93■■■□□ 2.54
SKP1-206ENST00000519321 PER1O15534 1290 aaPredicted RBP30.92■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms