RNA–Protein interactions for RNA: ENST00000519148.5

TOP1MT-208, Transcript of DNA topoisomerase I mitochondrial, human

TSL 2 BASIC

Gene TOP1MT, Length 1,868 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOP1MT-208	ENST00000519148	ADAMTS8	Q9UP79	889 aa		32.63	■■■□□ 2.81
TOP1MT-208	ENST00000519148	NRK	Q7Z2Y5	1582 aa		32.63	■■■□□ 2.81
TOP1MT-208	ENST00000519148	SALL2	Q9Y467	1007 aa	Predicted RBP	32.61	■■■□□ 2.81
TOP1MT-208	ENST00000519148	GGNBP2	Q9H3C7	697 aa		32.59	■■■□□ 2.81
TOP1MT-208	ENST00000519148	ACE	P12821	1306 aa		32.59	■■■□□ 2.81
TOP1MT-208	ENST00000519148	RBM33	Q96EV2	1170 aa	Known RBP	32.57	■■■□□ 2.8
TOP1MT-208	ENST00000519148	POLR3A	O14802	1390 aa	Predicted RBP	32.56	■■■□□ 2.8
TOP1MT-208	ENST00000519148	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	32.56	■■■□□ 2.8
TOP1MT-208	ENST00000519148	PROSER2	Q86WR7	435 aa	Predicted RBP	32.55	■■■□□ 2.8
TOP1MT-208	ENST00000519148	USP6	P35125	1406 aa		32.55	■■■□□ 2.8
TOP1MT-208	ENST00000519148	TNNT2	P45379	298 aa	Predicted RBP	32.54	■■■□□ 2.8
TOP1MT-208	ENST00000519148	RCAN3	Q9UKA8	241 aa		32.52	■■■□□ 2.8
TOP1MT-208	ENST00000519148	C14orf37	Q86TY3	774 aa		32.5	■■■□□ 2.79
TOP1MT-208	ENST00000519148	SSH2	Q76I76	1423 aa		32.5	■■■□□ 2.79
TOP1MT-208	ENST00000519148	NCOA3	Q9Y6Q9	1424 aa		32.49	■■■□□ 2.79
TOP1MT-208	ENST00000519148	PMFBP1	Q8TBY8	1022 aa		32.48	■■■□□ 2.79
TOP1MT-208	ENST00000519148	CDCA7L	Q96GN5	454 aa		32.48	■■■□□ 2.79
TOP1MT-208	ENST00000519148	RRP1	P56182	461 aa	Known RBP	32.48	■■■□□ 2.79
TOP1MT-208	ENST00000519148	B4GALNT3	Q6L9W6	998 aa		32.47	■■■□□ 2.79
TOP1MT-208	ENST00000519148	NME9	Q86XW9	330 aa		32.47	■■■□□ 2.79
TOP1MT-208	ENST00000519148	SHPRH	Q149N8	1683 aa		32.47	■■■□□ 2.79
TOP1MT-208	ENST00000519148	TTC21B	Q7Z4L5	1316 aa		32.47	■■■□□ 2.79
TOP1MT-208	ENST00000519148	MTHFS	P49914	203 aa		32.46	■■■□□ 2.79
TOP1MT-208	ENST00000519148	NGDN	Q8NEJ9	315 aa	Known RBP	32.46	■■■□□ 2.79
TOP1MT-208	ENST00000519148	TMEM94	Q12767	1356 aa		32.45	■■■□□ 2.78
TOP1MT-208	ENST00000519148	C19orf44	Q9H6X5	657 aa		32.43	■■■□□ 2.78
TOP1MT-208	ENST00000519148	MAP2	P11137	1827 aa	Known RBP	32.42	■■■□□ 2.78
TOP1MT-208	ENST00000519148	XIRP1	Q702N8	1843 aa	Known RBP	32.41	■■■□□ 2.78
TOP1MT-208	ENST00000519148	DCC	P43146	1447 aa		32.41	■■■□□ 2.78
TOP1MT-208	ENST00000519148	TTC21A	Q8NDW8	1320 aa		32.41	■■■□□ 2.78
TOP1MT-208	ENST00000519148	ZNF521	Q96K83	1311 aa		32.4	■■■□□ 2.78
TOP1MT-208	ENST00000519148	CFAP53	Q96M91	514 aa		32.4	■■■□□ 2.78
TOP1MT-208	ENST00000519148	COG3	Q96JB2	828 aa		32.4	■■■□□ 2.78
TOP1MT-208	ENST00000519148	PHF8	Q9UPP1	1060 aa		32.4	■■■□□ 2.78
TOP1MT-208	ENST00000519148	OVOS2	A0A0J9YW53	1432 aa		32.39	■■■□□ 2.78
TOP1MT-208	ENST00000519148	OVOS2	Q6IE36	1432 aa		32.39	■■■□□ 2.78
TOP1MT-208	ENST00000519148	ZRANB1	Q9UGI0	708 aa		32.38	■■■□□ 2.77
TOP1MT-208	ENST00000519148	AATK	Q6ZMQ8	1374 aa		32.37	■■■□□ 2.77
TOP1MT-208	ENST00000519148	PIK3C2A	O00443	1686 aa		32.36	■■■□□ 2.77
TOP1MT-208	ENST00000519148	NGEF	Q8N5V2	710 aa		32.35	■■■□□ 2.77
TOP1MT-208	ENST00000519148	COL3A1	P02461	1466 aa	Predicted RBP	32.35	■■■□□ 2.77
TOP1MT-208	ENST00000519148	KIF1A	Q12756	1690 aa		32.34	■■■□□ 2.77
TOP1MT-208	ENST00000519148	USP54	Q70EL1	1684 aa		32.34	■■■□□ 2.77
TOP1MT-208	ENST00000519148	C1orf167	Q5SNV9	1468 aa		32.33	■■■□□ 2.77
TOP1MT-208	ENST00000519148	GOLGA2	Q08379	1002 aa		32.33	■■■□□ 2.77
TOP1MT-208	ENST00000519148	ESCO1	Q5FWF5	840 aa		32.33	■■■□□ 2.77
TOP1MT-208	ENST00000519148	CCDC136	Q96JN2	1154 aa		32.33	■■■□□ 2.77
TOP1MT-208	ENST00000519148	CCDC146	Q8IYE0	955 aa		32.32	■■■□□ 2.76
TOP1MT-208	ENST00000519148	PNPLA6	Q8IY17	1366 aa		32.32	■■■□□ 2.76
TOP1MT-208	ENST00000519148	LRRC7	Q96NW7	1537 aa		32.31	■■■□□ 2.76
TOP1MT-208	ENST00000519148	DMRT2	Q9Y5R5	561 aa		32.31	■■■□□ 2.76
TOP1MT-208	ENST00000519148	USP31	Q70CQ4	1352 aa		32.3	■■■□□ 2.76
TOP1MT-208	ENST00000519148	POLK	Q9UBT6	870 aa		32.3	■■■□□ 2.76
TOP1MT-208	ENST00000519148	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	32.3	■■■□□ 2.76
TOP1MT-208	ENST00000519148	MST1R	Q04912	1400 aa		32.3	■■■□□ 2.76
TOP1MT-208	ENST00000519148	RBM19	Q9Y4C8	960 aa	Known RBP	32.29	■■■□□ 2.76
TOP1MT-208	ENST00000519148	ATF3	P18847	181 aa		32.29	■■■□□ 2.76
TOP1MT-208	ENST00000519148	MARF1	Q9Y4F3	1742 aa	Known RBP	32.28	■■■□□ 2.76
TOP1MT-208	ENST00000519148	DUSP27	Q5VZP5	1158 aa		32.28	■■■□□ 2.76
TOP1MT-208	ENST00000519148	APAF1	O14727	1248 aa		32.27	■■■□□ 2.76
TOP1MT-208	ENST00000519148	MSH6	P52701	1360 aa		32.27	■■■□□ 2.76
TOP1MT-208	ENST00000519148	ORAI2	Q96SN7	254 aa		32.27	■■■□□ 2.76
TOP1MT-208	ENST00000519148	CDK12	Q9NYV4	1490 aa	Predicted RBP	32.26	■■■□□ 2.76
TOP1MT-208	ENST00000519148	FBLN1	P23142	703 aa		32.25	■■■□□ 2.75
TOP1MT-208	ENST00000519148	SLFN5	Q08AF3	891 aa		32.24	■■■□□ 2.75
TOP1MT-208	ENST00000519148	CADPS2	Q86UW7	1296 aa		32.24	■■■□□ 2.75
TOP1MT-208	ENST00000519148	EMILIN1	Q9Y6C2	1016 aa		32.21	■■■□□ 2.75
TOP1MT-208	ENST00000519148	PSME1	Q06323	249 aa		32.2	■■■□□ 2.75
TOP1MT-208	ENST00000519148	TRMT2A	Q8IZ69	625 aa	Known RBP	32.2	■■■□□ 2.75
TOP1MT-208	ENST00000519148	EXOC6	Q8TAG9	804 aa		32.2	■■■□□ 2.75
TOP1MT-208	ENST00000519148	TRPM3	Q9HCF6	1732 aa	Predicted RBP	32.2	■■■□□ 2.74
TOP1MT-208	ENST00000519148	DIAPH1	O60610	1272 aa	Known RBP	32.18	■■■□□ 2.74
TOP1MT-208	ENST00000519148	RRS1	Q15050	365 aa	Known RBP	32.17	■■■□□ 2.74
TOP1MT-208	ENST00000519148	IQSEC2	Q5JU85	1478 aa		32.16	■■■□□ 2.74
TOP1MT-208	ENST00000519148	PPM1G	O15355	546 aa	Predicted RBP	32.16	■■■□□ 2.74
TOP1MT-208	ENST00000519148	PAK3	O75914	559 aa	Predicted RBP	32.16	■■■□□ 2.74
TOP1MT-208	ENST00000519148	RUNDC1	Q96C34	613 aa		32.16	■■■□□ 2.74
TOP1MT-208	ENST00000519148		E9PSI1	815 aa		32.16	■■■□□ 2.74
TOP1MT-208	ENST00000519148	FOXO3	O43524	673 aa		32.16	■■■□□ 2.74
TOP1MT-208	ENST00000519148	NLRP6	P59044	892 aa		32.16	■■■□□ 2.74
TOP1MT-208	ENST00000519148	ABTB2	Q8N961	1025 aa		32.16	■■■□□ 2.74
TOP1MT-208	ENST00000519148	PEAK1	Q9H792	1746 aa		32.15	■■■□□ 2.74
TOP1MT-208	ENST00000519148	U2AF1L5	P0DN76	240 aa	Predicted RBP	32.14	■■■□□ 2.74
TOP1MT-208	ENST00000519148	U2AF1	Q01081	240 aa	Known RBP eCLIP	32.14	■■■□□ 2.74
TOP1MT-208	ENST00000519148	PLIN1	O60240	522 aa		32.1	■■■□□ 2.73
TOP1MT-208	ENST00000519148	U2SURP	O15042	1029 aa	Known RBP	32.1	■■■□□ 2.73
TOP1MT-208	ENST00000519148	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	32.08	■■■□□ 2.73
TOP1MT-208	ENST00000519148	ALS2	Q96Q42	1657 aa		32.08	■■■□□ 2.73
TOP1MT-208	ENST00000519148	NUTM2G	Q5VZR2	741 aa		32.08	■■■□□ 2.73
TOP1MT-208	ENST00000519148	KRT28	Q7Z3Y7	464 aa		32.08	■■■□□ 2.73
TOP1MT-208	ENST00000519148	WWC1	Q8IX03	1113 aa		32.07	■■■□□ 2.72
TOP1MT-208	ENST00000519148	NCBP3	Q53F19	620 aa	Known RBP	32.06	■■■□□ 2.72
TOP1MT-208	ENST00000519148	SPINK5	Q9NQ38	1064 aa	Predicted RBP	32.06	■■■□□ 2.72
TOP1MT-208	ENST00000519148	MAP3K19	Q56UN5	1328 aa		32.06	■■■□□ 2.72
TOP1MT-208	ENST00000519148	IL13	P35225	146 aa		32.06	■■■□□ 2.72
TOP1MT-208	ENST00000519148	XPC	Q01831	940 aa	Predicted RBP	32.06	■■■□□ 2.72
TOP1MT-208	ENST00000519148	SOX12	O15370	315 aa		32.05	■■■□□ 2.72
TOP1MT-208	ENST00000519148	SBNO1	A3KN83	1393 aa		32.04	■■■□□ 2.72
TOP1MT-208	ENST00000519148	TCP11L2	Q8N4U5	519 aa		32.04	■■■□□ 2.72
TOP1MT-208	ENST00000519148	CRBN	Q96SW2	442 aa		32.03	■■■□□ 2.72

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms