RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 ABCC1P33527 1531 aa10.04□□□□□ -0.8
PABPC1-207ENST00000518716 ZNF335Q9H4Z2 1342 aaPredicted RBP10.04□□□□□ -0.8
PABPC1-207ENST00000518716 CAMSAP1Q5T5Y3 1602 aa10.04□□□□□ -0.8
PABPC1-207ENST00000518716 KIDINS220Q9ULH0 1771 aa10.03□□□□□ -0.8
PABPC1-207ENST00000518716 RNF223E7ERA6 249 aa10.03□□□□□ -0.8
PABPC1-207ENST00000518716 ZPR1O75312 459 aa10.03□□□□□ -0.8
PABPC1-207ENST00000518716 TREML4Q6UXN2 200 aa10.03□□□□□ -0.8
PABPC1-207ENST00000518716 RTN4Q9NQC3 1192 aaKnown RBP10.03□□□□□ -0.8
PABPC1-207ENST00000518716 SPRYD7Q5W111 196 aa10.02□□□□□ -0.81
PABPC1-207ENST00000518716 PLA2R1Q13018 1463 aa10.02□□□□□ -0.81
PABPC1-207ENST00000518716 TCOF1Q13428 1488 aaKnown RBP10.02□□□□□ -0.81
PABPC1-207ENST00000518716 CLIP1P30622 1438 aa10.01□□□□□ -0.81
PABPC1-207ENST00000518716 PRR20EP86478 221 aa10.01□□□□□ -0.81
PABPC1-207ENST00000518716 PRR20CP86479 221 aa10.01□□□□□ -0.81
PABPC1-207ENST00000518716 PRR20DP86480 221 aa10.01□□□□□ -0.81
PABPC1-207ENST00000518716 PRR20BP86481 221 aa10.01□□□□□ -0.81
PABPC1-207ENST00000518716 PRR20AP86496 221 aa10.01□□□□□ -0.81
PABPC1-207ENST00000518716 AMER1Q5JTC6 1135 aaPredicted RBP10.01□□□□□ -0.81
PABPC1-207ENST00000518716 MROH2AA6NES4 1674 aa10.01□□□□□ -0.81
PABPC1-207ENST00000518716 LRRIQ1Q96JM4 1722 aa10.01□□□□□ -0.81
PABPC1-207ENST00000518716 PTPRKQ15262 1439 aa10□□□□□ -0.81
PABPC1-207ENST00000518716 UBAP1LF5GYI3 381 aa10□□□□□ -0.81
PABPC1-207ENST00000518716 HDGFP51858 240 aaKnown RBP10□□□□□ -0.81
PABPC1-207ENST00000518716 SWT1Q5T5J6 900 aaKnown RBP10□□□□□ -0.81
PABPC1-207ENST00000518716 ESF1Q9H501 851 aaKnown RBP10□□□□□ -0.81
PABPC1-207ENST00000518716 CDHR5Q9HBB8 845 aa10□□□□□ -0.81
PABPC1-207ENST00000518716 ATP1B4Q9UN42 357 aaPredicted RBP10□□□□□ -0.81
PABPC1-207ENST00000518716 PREX2Q70Z35 1606 aa10□□□□□ -0.81
PABPC1-207ENST00000518716 ITSN2Q9NZM3 1697 aa9.99□□□□□ -0.81
PABPC1-207ENST00000518716 ZNF598Q86UK7 904 aaKnown RBP9.99□□□□□ -0.81
PABPC1-207ENST00000518716 SAMD9LQ8IVG5 1584 aa9.99□□□□□ -0.81
PABPC1-207ENST00000518716 ZNF142P52746 1687 aaPredicted RBP9.97□□□□□ -0.81
PABPC1-207ENST00000518716 ST8SIA5O15466 376 aa9.97□□□□□ -0.81
PABPC1-207ENST00000518716 NECTIN2Q92692 538 aa9.97□□□□□ -0.81
PABPC1-207ENST00000518716 PLXNC1O60486 1568 aa9.97□□□□□ -0.81
PABPC1-207ENST00000518716 FAM187AA6NFU0 413 aa9.96□□□□□ -0.82
PABPC1-207ENST00000518716 SPDYE16A6NNV3 312 aaPredicted RBP9.96□□□□□ -0.82
PABPC1-207ENST00000518716 UBTFP17480 764 aaKnown RBP9.96□□□□□ -0.82
PABPC1-207ENST00000518716 HSPA1LP34931 641 aa9.96□□□□□ -0.82
PABPC1-207ENST00000518716 SLF2Q8IX21 1173 aa9.96□□□□□ -0.82
PABPC1-207ENST00000518716 RBM27Q9P2N5 1060 aaKnown RBP9.96□□□□□ -0.82
PABPC1-207ENST00000518716 CASKIN1Q8WXD9 1431 aa9.96□□□□□ -0.82
PABPC1-207ENST00000518716 GPATCH8Q9UKJ3 1502 aaKnown RBP9.96□□□□□ -0.82
PABPC1-207ENST00000518716 CDC42BPAQ5VT25 1732 aa9.96□□□□□ -0.82
PABPC1-207ENST00000518716 TNFRSF10AO00220 468 aa9.95□□□□□ -0.82
PABPC1-207ENST00000518716 TLL1O43897 1013 aa9.95□□□□□ -0.82
PABPC1-207ENST00000518716 GDF9O60383 454 aa9.95□□□□□ -0.82
PABPC1-207ENST00000518716 BLOC1S3Q6QNY0 202 aa9.95□□□□□ -0.82
PABPC1-207ENST00000518716 LIAT1Q6ZQX7 453 aa9.95□□□□□ -0.82
PABPC1-207ENST00000518716 TTC13Q8NBP0 860 aa9.95□□□□□ -0.82
PABPC1-207ENST00000518716 SPAG9O60271 1321 aaKnown RBP9.95□□□□□ -0.82
PABPC1-207ENST00000518716 KIAA1107Q9UPP5 1409 aa9.95□□□□□ -0.82
PABPC1-207ENST00000518716 CEP170BQ9Y4F5 1589 aaPredicted RBP9.95□□□□□ -0.82
PABPC1-207ENST00000518716 MYO3AQ8NEV4 1616 aa9.94□□□□□ -0.82
PABPC1-207ENST00000518716 PPEF1O14829 653 aaPredicted RBP9.94□□□□□ -0.82
PABPC1-207ENST00000518716 HNRNPMP52272 730 aaKnown RBP eCLIP9.94□□□□□ -0.82
PABPC1-207ENST00000518716 ZNF697Q5TEC3 545 aa9.94□□□□□ -0.82
PABPC1-207ENST00000518716 AAASQ9NRG9 546 aa9.94□□□□□ -0.82
PABPC1-207ENST00000518716 MED1Q15648 1581 aaPredicted RBP9.93□□□□□ -0.82
PABPC1-207ENST00000518716 A2MP01023 1474 aa9.93□□□□□ -0.82
PABPC1-207ENST00000518716 CCDC18Q5T9S5 1454 aa9.93□□□□□ -0.82
PABPC1-207ENST00000518716 GRXCR2A6NFK2 248 aa9.93□□□□□ -0.82
PABPC1-207ENST00000518716 PCDHB3Q9Y5E6 796 aa9.93□□□□□ -0.82
PABPC1-207ENST00000518716 CLTCQ00610 1675 aaKnown RBP9.93□□□□□ -0.82
PABPC1-207ENST00000518716 ALKQ9UM73 1620 aa9.93□□□□□ -0.82
PABPC1-207ENST00000518716 SYCP2Q9BX26 1530 aa9.92□□□□□ -0.82
PABPC1-207ENST00000518716 A2ML1A8K2U0 1454 aa9.92□□□□□ -0.82
PABPC1-207ENST00000518716 ANKLE1Q8NAG6 615 aa9.92□□□□□ -0.82
PABPC1-207ENST00000518716 DNMT1P26358 1616 aaKnown RBP9.92□□□□□ -0.82
PABPC1-207ENST00000518716 INO80Q9ULG1 1556 aaPredicted RBP9.92□□□□□ -0.82
PABPC1-207ENST00000518716 ATP7AQ04656 1500 aa9.92□□□□□ -0.82
PABPC1-207ENST00000518716 SUPT6HQ7KZ85 1726 aaKnown RBP9.91□□□□□ -0.82
PABPC1-207ENST00000518716 OSBPP22059 807 aa9.91□□□□□ -0.82
PABPC1-207ENST00000518716 NEURL4Q96JN8 1562 aa9.91□□□□□ -0.82
PABPC1-207ENST00000518716 CPS1P31327 1500 aa9.91□□□□□ -0.82
PABPC1-207ENST00000518716 SHANK2Q9UPX8 1470 aa9.91□□□□□ -0.82
PABPC1-207ENST00000518716 TOM1O60784 492 aa9.9□□□□□ -0.82
PABPC1-207ENST00000518716 GGT6Q6P531 493 aa9.9□□□□□ -0.82
PABPC1-207ENST00000518716 PADI6Q6TGC4 694 aa9.9□□□□□ -0.82
PABPC1-207ENST00000518716 S1PR4O95977 384 aa9.89□□□□□ -0.83
PABPC1-207ENST00000518716 ZNF777Q9ULD5 760 aaPredicted RBP9.89□□□□□ -0.83
PABPC1-207ENST00000518716 PLEKHH2Q8IVE3 1493 aa9.89□□□□□ -0.83
PABPC1-207ENST00000518716 MBD5Q9P267 1494 aa9.89□□□□□ -0.83
PABPC1-207ENST00000518716 VWDEQ8N2E2 1590 aa9.88□□□□□ -0.83
PABPC1-207ENST00000518716 PIP4K2BP78356 416 aa9.88□□□□□ -0.83
PABPC1-207ENST00000518716 FBXO31Q5XUX0 539 aaPredicted RBP9.88□□□□□ -0.83
PABPC1-207ENST00000518716 PRR14Q9BWN1 585 aa9.88□□□□□ -0.83
PABPC1-207ENST00000518716 NPDC1Q9NQX5 325 aaPredicted RBP9.88□□□□□ -0.83
PABPC1-207ENST00000518716 MED14O60244 1454 aa9.87□□□□□ -0.83
PABPC1-207ENST00000518716 FYCO1Q9BQS8 1478 aa9.87□□□□□ -0.83
PABPC1-207ENST00000518716 EYA1Q99502 592 aa9.87□□□□□ -0.83
PABPC1-207ENST00000518716 CFDP1Q9UEE9 299 aaPredicted RBP9.87□□□□□ -0.83
PABPC1-207ENST00000518716 DACH1Q9UI36 760 aa9.87□□□□□ -0.83
PABPC1-207ENST00000518716 DHX29Q7Z478 1369 aaKnown RBP9.87□□□□□ -0.83
PABPC1-207ENST00000518716 RTEL1-TNFRSF6BF6WH68 1400 aa9.86□□□□□ -0.83
PABPC1-207ENST00000518716 PLA2G2CQ5R387 149 aa9.86□□□□□ -0.83
PABPC1-207ENST00000518716 RGS17Q9UGC6 210 aaPredicted RBP9.86□□□□□ -0.83
PABPC1-207ENST00000518716 TNRQ92752 1358 aa9.86□□□□□ -0.83
PABPC1-207ENST00000518716 ZNF644Q9H582 1327 aaPredicted RBP9.85□□□□□ -0.83
PABPC1-207ENST00000518716 SLC24A1O60721 1099 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms