RNA–Protein interactions for RNA: ENST00000518590.1

AC104561.3-201, humanhuman

TSL 5 BASIC

Gene AC104561.3, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC104561.3-201ENST00000518590 RALGAPBQ86X10 1494 aa20.5■□□□□ 0.87
AC104561.3-201ENST00000518590 CABP2Q9NPB3 220 aa20.5■□□□□ 0.87
AC104561.3-201ENST00000518590 SRPK2P78362 688 aaKnown RBP20.49■□□□□ 0.87
AC104561.3-201ENST00000518590 PPIP5K1Q6PFW1 1433 aa20.49■□□□□ 0.87
AC104561.3-201ENST00000518590 PHRF1Q9P1Y6 1649 aaKnown RBP20.49■□□□□ 0.87
AC104561.3-201ENST00000518590 HAP1P54257 671 aaPredicted RBP20.48■□□□□ 0.87
AC104561.3-201ENST00000518590 UNC5CLQ8IV45 518 aa20.48■□□□□ 0.87
AC104561.3-201ENST00000518590 NRAPQ86VF7 1730 aa20.47■□□□□ 0.87
AC104561.3-201ENST00000518590 COL14A1Q05707 1796 aaKnown RBP20.47■□□□□ 0.87
AC104561.3-201ENST00000518590 PAK3O75914 559 aaPredicted RBP20.47■□□□□ 0.87
AC104561.3-201ENST00000518590 GLI3P10071 1580 aa20.46■□□□□ 0.87
AC104561.3-201ENST00000518590 PLEKHG5O94827 1062 aa20.46■□□□□ 0.87
AC104561.3-201ENST00000518590 EVC2Q86UK5 1308 aa20.46■□□□□ 0.87
AC104561.3-201ENST00000518590 FAM83GA6ND36 823 aa20.45■□□□□ 0.86
AC104561.3-201ENST00000518590 GJD4Q96KN9 370 aaPredicted RBP20.45■□□□□ 0.86
AC104561.3-201ENST00000518590 UPF1Q92900 1129 aaKnown RBP eCLIP20.44■□□□□ 0.86
AC104561.3-201ENST00000518590 SBNO2Q9Y2G9 1366 aa20.44■□□□□ 0.86
AC104561.3-201ENST00000518590 AKAP12Q02952 1782 aa20.44■□□□□ 0.86
AC104561.3-201ENST00000518590 CARD11Q9BXL7 1154 aa20.43■□□□□ 0.86
AC104561.3-201ENST00000518590 CABP1Q9NZU7 370 aa20.42■□□□□ 0.86
AC104561.3-201ENST00000518590 BRD4O60885 1362 aaPredicted RBP20.42■□□□□ 0.86
AC104561.3-201ENST00000518590 VPS72Q15906 364 aa20.4■□□□□ 0.86
AC104561.3-201ENST00000518590 BRWD3Q6RI45 1802 aa20.4■□□□□ 0.86
AC104561.3-201ENST00000518590 USP6P35125 1406 aa20.39■□□□□ 0.85
AC104561.3-201ENST00000518590 SSH2Q76I76 1423 aa20.39■□□□□ 0.85
AC104561.3-201ENST00000518590 NRKQ7Z2Y5 1582 aa20.38■□□□□ 0.85
AC104561.3-201ENST00000518590 NUTM2GQ5VZR2 741 aa20.37■□□□□ 0.85
AC104561.3-201ENST00000518590 ABTB2Q8N961 1025 aa20.37■□□□□ 0.85
AC104561.3-201ENST00000518590 PIK3C2AO00443 1686 aa20.36■□□□□ 0.85
AC104561.3-201ENST00000518590 USP19O94966 1318 aa20.36■□□□□ 0.85
AC104561.3-201ENST00000518590 BTG4Q9NY30 223 aa20.36■□□□□ 0.85
AC104561.3-201ENST00000518590 ATAD2Q6PL18 1390 aa20.35■□□□□ 0.85
AC104561.3-201ENST00000518590 CLSPNQ9HAW4 1339 aa20.35■□□□□ 0.85
AC104561.3-201ENST00000518590 ONECUT3O60422 494 aaPredicted RBP20.35■□□□□ 0.85
AC104561.3-201ENST00000518590 MON2Q7Z3U7 1717 aa20.35■□□□□ 0.85
AC104561.3-201ENST00000518590 CPSF1Q10570 1443 aaKnown RBP20.35■□□□□ 0.85
AC104561.3-201ENST00000518590 KIAA0232Q92628 1395 aa20.34■□□□□ 0.85
AC104561.3-201ENST00000518590 LMO7Q8WWI1 1683 aa20.33■□□□□ 0.85
AC104561.3-201ENST00000518590 NLRP13Q86W25 1043 aa20.33■□□□□ 0.85
AC104561.3-201ENST00000518590 ZNF692Q9BU19 519 aaPredicted RBP20.33■□□□□ 0.85
AC104561.3-201ENST00000518590 PCGF6Q9BYE7 350 aa20.33■□□□□ 0.85
AC104561.3-201ENST00000518590 PRDM11Q9NQV5 511 aa20.33■□□□□ 0.85
AC104561.3-201ENST00000518590 SLIT3O75094 1523 aa20.32■□□□□ 0.84
AC104561.3-201ENST00000518590 ZC3H6P61129 1189 aaKnown RBP20.31■□□□□ 0.84
AC104561.3-201ENST00000518590 TIMELESSQ9UNS1 1208 aa20.31■□□□□ 0.84
AC104561.3-201ENST00000518590 CPDO75976 1380 aa20.31■□□□□ 0.84
AC104561.3-201ENST00000518590 TESK2Q96S53 571 aa20.3■□□□□ 0.84
AC104561.3-201ENST00000518590 GCP02774 474 aa20.29■□□□□ 0.84
AC104561.3-201ENST00000518590 CHRNA2Q15822 529 aa20.29■□□□□ 0.84
AC104561.3-201ENST00000518590 PUS7Q96PZ0 661 aaKnown RBP20.29■□□□□ 0.84
AC104561.3-201ENST00000518590 CCDC9Q9Y3X0 531 aaKnown RBP20.29■□□□□ 0.84
AC104561.3-201ENST00000518590 CD163L1Q9NR16 1453 aa20.29■□□□□ 0.84
AC104561.3-201ENST00000518590 CAMTA1Q9Y6Y1 1673 aa20.29■□□□□ 0.84
AC104561.3-201ENST00000518590 TTC21BQ7Z4L5 1316 aa20.28■□□□□ 0.84
AC104561.3-201ENST00000518590 ST20-MTHFSA0A0A6YYL1 179 aa20.28■□□□□ 0.84
AC104561.3-201ENST00000518590 SEPT12Q8IYM1 358 aa20.28■□□□□ 0.84
AC104561.3-201ENST00000518590 SPATA31A5Q5VU36 1347 aa20.27■□□□□ 0.84
AC104561.3-201ENST00000518590 SPATA31A7Q8IWB4 1347 aa20.27■□□□□ 0.84
AC104561.3-201ENST00000518590 EP400Q96L91 3159 aa20.27■□□□□ 0.84
AC104561.3-201ENST00000518590 COL18A1P39060 1754 aa20.27■□□□□ 0.84
AC104561.3-201ENST00000518590 USP54Q70EL1 1684 aa20.27■□□□□ 0.84
AC104561.3-201ENST00000518590 NLRP6P59044 892 aa20.27■□□□□ 0.84
AC104561.3-201ENST00000518590 TTC21AQ8NDW8 1320 aa20.27■□□□□ 0.83
AC104561.3-201ENST00000518590 THSD7AQ9UPZ6 1657 aa20.26■□□□□ 0.83
AC104561.3-201ENST00000518590 KTN1Q86UP2 1357 aaKnown RBP20.26■□□□□ 0.83
AC104561.3-201ENST00000518590 SLC24A1O60721 1099 aa20.23■□□□□ 0.83
AC104561.3-201ENST00000518590 FAM98CQ17RN3 349 aaKnown RBP20.23■□□□□ 0.83
AC104561.3-201ENST00000518590 SPATA31A1Q5TZJ5 1347 aa20.23■□□□□ 0.83
AC104561.3-201ENST00000518590 RGPD5Q99666 1765 aa20.22■□□□□ 0.83
AC104561.3-201ENST00000518590 CCDC125Q86Z20 511 aa20.22■□□□□ 0.83
AC104561.3-201ENST00000518590 SLC12A5Q9H2X9 1139 aa20.22■□□□□ 0.83
AC104561.3-201ENST00000518590 USP47Q96K76 1375 aa20.21■□□□□ 0.83
AC104561.3-201ENST00000518590 AATKQ6ZMQ8 1374 aa20.21■□□□□ 0.83
AC104561.3-201ENST00000518590 COL5A2P05997 1499 aaPredicted RBP20.2■□□□□ 0.82
AC104561.3-201ENST00000518590 KRT27Q7Z3Y8 459 aa20.2■□□□□ 0.82
AC104561.3-201ENST00000518590 TMC1Q8TDI8 760 aa20.2■□□□□ 0.82
AC104561.3-201ENST00000518590 STRN4Q9NRL3 753 aa20.2■□□□□ 0.82
AC104561.3-201ENST00000518590 USP31Q70CQ4 1352 aa20.2■□□□□ 0.82
AC104561.3-201ENST00000518590 NFAT5O94916 1531 aa20.19■□□□□ 0.82
AC104561.3-201ENST00000518590 EVA1CP58658 441 aa20.18■□□□□ 0.82
AC104561.3-201ENST00000518590 HDGFL2Q7Z4V5 671 aaPredicted RBP20.18■□□□□ 0.82
AC104561.3-201ENST00000518590 KCNH5Q8NCM2 988 aa20.18■□□□□ 0.82
AC104561.3-201ENST00000518590 A0A1W2PP64 1363 aa20.18■□□□□ 0.82
AC104561.3-201ENST00000518590 NINLQ9Y2I6 1382 aa20.18■□□□□ 0.82
AC104561.3-201ENST00000518590 EDC4Q6P2E9 1401 aaKnown RBP20.18■□□□□ 0.82
AC104561.3-201ENST00000518590 LARP1Q6PKG0 1096 aaKnown RBP20.17■□□□□ 0.82
AC104561.3-201ENST00000518590 TERF2IPQ9NYB0 399 aa20.17■□□□□ 0.82
AC104561.3-201ENST00000518590 BARGINQ6ZT62 677 aa20.16■□□□□ 0.82
AC104561.3-201ENST00000518590 ARHGEF25Q86VW2 580 aa20.16■□□□□ 0.82
AC104561.3-201ENST00000518590 BLMP54132 1417 aaPredicted RBP20.16■□□□□ 0.82
AC104561.3-201ENST00000518590 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.15■□□□□ 0.82
AC104561.3-201ENST00000518590 ZRANB1Q9UGI0 708 aa20.15■□□□□ 0.82
AC104561.3-201ENST00000518590 LTN1O94822 1766 aa20.15■□□□□ 0.82
AC104561.3-201ENST00000518590 A0A0G2JS52 829 aa20.14■□□□□ 0.81
AC104561.3-201ENST00000518590 MYT1Q01538 1121 aa20.14■□□□□ 0.81
AC104561.3-201ENST00000518590 NME9Q86XW9 330 aa20.14■□□□□ 0.81
AC104561.3-201ENST00000518590 CCER1Q8TC90 406 aaPredicted RBP20.14■□□□□ 0.81
AC104561.3-201ENST00000518590 AXIN2Q9Y2T1 843 aa20.14■□□□□ 0.81
AC104561.3-201ENST00000518590 WNK3Q9BYP7 1800 aa20.13■□□□□ 0.81
AC104561.3-201ENST00000518590 PARP4Q9UKK3 1724 aaKnown RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms