RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 AKAP12Q02952 1782 aa30.79■■■□□ 2.52
VEGFA-217ENST00000518538 TMC1Q8TDI8 760 aa30.78■■■□□ 2.52
VEGFA-217ENST00000518538 NINLQ9Y2I6 1382 aa30.78■■■□□ 2.52
VEGFA-217ENST00000518538 HSPA5P11021 654 aaKnown RBP30.77■■■□□ 2.52
VEGFA-217ENST00000518538 CDCA8Q53HL2 280 aa30.77■■■□□ 2.52
VEGFA-217ENST00000518538 CABLES1Q8TDN4 633 aa30.77■■■□□ 2.52
VEGFA-217ENST00000518538 ABCA3Q99758 1704 aa30.77■■■□□ 2.52
VEGFA-217ENST00000518538 SSH2Q76I76 1423 aa30.76■■■□□ 2.51
VEGFA-217ENST00000518538 C8orf37Q96NL8 207 aa30.76■■■□□ 2.51
VEGFA-217ENST00000518538 HAP1P54257 671 aaPredicted RBP30.75■■■□□ 2.51
VEGFA-217ENST00000518538 SLC12A5Q9H2X9 1139 aa30.75■■■□□ 2.51
VEGFA-217ENST00000518538 CD163L1Q9NR16 1453 aa30.75■■■□□ 2.51
VEGFA-217ENST00000518538 MARF1Q9Y4F3 1742 aaKnown RBP30.74■■■□□ 2.51
VEGFA-217ENST00000518538 PLEKHG5O94827 1062 aa30.73■■■□□ 2.51
VEGFA-217ENST00000518538 ABTB2Q8N961 1025 aa30.73■■■□□ 2.51
VEGFA-217ENST00000518538 KTN1Q86UP2 1357 aaKnown RBP30.73■■■□□ 2.51
VEGFA-217ENST00000518538 MON2Q7Z3U7 1717 aa30.72■■■□□ 2.51
VEGFA-217ENST00000518538 CRYBG1Q9Y4K1 1723 aa30.72■■■□□ 2.51
VEGFA-217ENST00000518538 AFF2P51816 1311 aa30.72■■■□□ 2.51
VEGFA-217ENST00000518538 NRKQ7Z2Y5 1582 aa30.71■■■□□ 2.51
VEGFA-217ENST00000518538 ZNF772Q68DY9 489 aaPredicted RBP30.71■■■□□ 2.51
VEGFA-217ENST00000518538 HDGFL2Q7Z4V5 671 aaPredicted RBP30.71■■■□□ 2.51
VEGFA-217ENST00000518538 NGLY1Q96IV0 654 aa30.71■■■□□ 2.51
VEGFA-217ENST00000518538 TERF2IPQ9NYB0 399 aa30.71■■■□□ 2.51
VEGFA-217ENST00000518538 NUTM2GQ5VZR2 741 aa30.69■■■□□ 2.5
VEGFA-217ENST00000518538 TTC21BQ7Z4L5 1316 aa30.69■■■□□ 2.5
VEGFA-217ENST00000518538 TTC21AQ8NDW8 1320 aa30.68■■■□□ 2.5
VEGFA-217ENST00000518538 A0A1W2PP64 1363 aa30.67■■■□□ 2.5
VEGFA-217ENST00000518538 POTEAQ6S8J7 498 aa30.66■■■□□ 2.5
VEGFA-217ENST00000518538 NLRP13Q86W25 1043 aa30.66■■■□□ 2.5
VEGFA-217ENST00000518538 FNBP4Q8N3X1 1017 aaPredicted RBP30.66■■■□□ 2.5
VEGFA-217ENST00000518538 PHRF1Q9P1Y6 1649 aaKnown RBP30.65■■■□□ 2.5
VEGFA-217ENST00000518538 USP19O94966 1318 aa30.65■■■□□ 2.5
VEGFA-217ENST00000518538 PIK3C2AO00443 1686 aa30.65■■■□□ 2.5
VEGFA-217ENST00000518538 ILDR2Q71H61 639 aa30.64■■■□□ 2.5
VEGFA-217ENST00000518538 EDC4Q6P2E9 1401 aaKnown RBP30.64■■■□□ 2.49
VEGFA-217ENST00000518538 ANKRD36BQ8N2N9 1353 aa30.63■■■□□ 2.49
VEGFA-217ENST00000518538 NLRP6P59044 892 aa30.61■■■□□ 2.49
VEGFA-217ENST00000518538 USP21Q9UK80 565 aa30.61■■■□□ 2.49
VEGFA-217ENST00000518538 SLIT2O94813 1529 aa30.6■■■□□ 2.49
VEGFA-217ENST00000518538 MYOM1P52179 1685 aa30.59■■■□□ 2.49
VEGFA-217ENST00000518538 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.58■■■□□ 2.49
VEGFA-217ENST00000518538 BCL9LQ86UU0 1499 aa30.57■■■□□ 2.48
VEGFA-217ENST00000518538 FAM83GA6ND36 823 aa30.57■■■□□ 2.48
VEGFA-217ENST00000518538 SLIT3O75094 1523 aa30.57■■■□□ 2.48
VEGFA-217ENST00000518538 GCP02774 474 aa30.55■■■□□ 2.48
VEGFA-217ENST00000518538 COL14A1Q05707 1796 aaKnown RBP30.55■■■□□ 2.48
VEGFA-217ENST00000518538 PLCH1Q4KWH8 1693 aa30.55■■■□□ 2.48
VEGFA-217ENST00000518538 KIAA0232Q92628 1395 aa30.54■■■□□ 2.48
VEGFA-217ENST00000518538 QTRT2Q9H974 415 aaKnown RBP30.54■■■□□ 2.48
VEGFA-217ENST00000518538 PRDM11Q9NQV5 511 aa30.54■■■□□ 2.48
VEGFA-217ENST00000518538 USP31Q70CQ4 1352 aa30.54■■■□□ 2.48
VEGFA-217ENST00000518538 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.53■■■□□ 2.48
VEGFA-217ENST00000518538 NWD2Q9ULI1 1742 aa30.53■■■□□ 2.48
VEGFA-217ENST00000518538 NME9Q86XW9 330 aa30.53■■■□□ 2.48
VEGFA-217ENST00000518538 POLR3GLQ9BT43 218 aa30.53■■■□□ 2.48
VEGFA-217ENST00000518538 ZC3H6P61129 1189 aaKnown RBP30.52■■■□□ 2.48
VEGFA-217ENST00000518538 UNC5CLQ8IV45 518 aa30.52■■■□□ 2.48
VEGFA-217ENST00000518538 TRPC5Q9UL62 973 aaPredicted RBP30.52■■■□□ 2.48
VEGFA-217ENST00000518538 ATRNO75882 1429 aa30.52■■■□□ 2.48
VEGFA-217ENST00000518538 CPDO75976 1380 aa30.52■■■□□ 2.48
VEGFA-217ENST00000518538 USP54Q70EL1 1684 aa30.52■■■□□ 2.48
VEGFA-217ENST00000518538 C11orf95C9JLR9 678 aaPredicted RBP30.5■■■□□ 2.47
VEGFA-217ENST00000518538 RXRBP28702 533 aa30.49■■■□□ 2.47
VEGFA-217ENST00000518538 KCNH5Q8NCM2 988 aa30.48■■■□□ 2.47
VEGFA-217ENST00000518538 ZRANB1Q9UGI0 708 aa30.48■■■□□ 2.47
VEGFA-217ENST00000518538 BTG4Q9NY30 223 aa30.47■■■□□ 2.47
VEGFA-217ENST00000518538 RBM6P78332 1123 aaKnown RBP30.46■■■□□ 2.47
VEGFA-217ENST00000518538 CHRNA2Q15822 529 aa30.46■■■□□ 2.47
VEGFA-217ENST00000518538 OVOS2A0A0J9YW53 1432 aa30.46■■■□□ 2.47
VEGFA-217ENST00000518538 OVOS2Q6IE36 1432 aa30.46■■■□□ 2.47
VEGFA-217ENST00000518538 NRAPQ86VF7 1730 aa30.45■■■□□ 2.47
VEGFA-217ENST00000518538 NFAT5O94916 1531 aa30.43■■■□□ 2.46
VEGFA-217ENST00000518538 CARD14Q9BXL6 1004 aa30.43■■■□□ 2.46
VEGFA-217ENST00000518538 CDK12Q9NYV4 1490 aaPredicted RBP30.43■■■□□ 2.46
VEGFA-217ENST00000518538 KIF7Q2M1P5 1343 aa30.43■■■□□ 2.46
VEGFA-217ENST00000518538 NSD3Q9BZ95 1437 aa30.41■■■□□ 2.46
VEGFA-217ENST00000518538 VPS72Q15906 364 aa30.41■■■□□ 2.46
VEGFA-217ENST00000518538 LMO7Q8WWI1 1683 aa30.41■■■□□ 2.46
VEGFA-217ENST00000518538 SOX12O15370 315 aa30.4■■■□□ 2.46
VEGFA-217ENST00000518538 GJD4Q96KN9 370 aaPredicted RBP30.4■■■□□ 2.46
VEGFA-217ENST00000518538 COG3Q96JB2 828 aa30.39■■■□□ 2.46
VEGFA-217ENST00000518538 AATKQ6ZMQ8 1374 aa30.39■■■□□ 2.45
VEGFA-217ENST00000518538 FYB1O15117 783 aa30.38■■■□□ 2.45
VEGFA-217ENST00000518538 ARHGEF25Q86VW2 580 aa30.38■■■□□ 2.45
VEGFA-217ENST00000518538 CAMTA1Q9Y6Y1 1673 aa30.37■■■□□ 2.45
VEGFA-217ENST00000518538 ZBTB7CA1YPR0 619 aa30.36■■■□□ 2.45
VEGFA-217ENST00000518538 KIF20BQ96Q89 1820 aa30.36■■■□□ 2.45
VEGFA-217ENST00000518538 PANK3Q9H999 370 aa30.35■■■□□ 2.45
VEGFA-217ENST00000518538 GLI3P10071 1580 aa30.35■■■□□ 2.45
VEGFA-217ENST00000518538 RGS12O14924 1447 aa30.34■■■□□ 2.45
VEGFA-217ENST00000518538 GGNBP2Q9H3C7 697 aa30.34■■■□□ 2.45
VEGFA-217ENST00000518538 CCDC9Q9Y3X0 531 aaKnown RBP30.34■■■□□ 2.45
VEGFA-217ENST00000518538 CCDC7Q96M83 1385 aa30.33■■■□□ 2.45
VEGFA-217ENST00000518538 COL18A1P39060 1754 aa30.33■■■□□ 2.45
VEGFA-217ENST00000518538 CGNL1Q0VF96 1302 aa30.32■■■□□ 2.44
VEGFA-217ENST00000518538 STRN4Q9NRL3 753 aa30.32■■■□□ 2.44
VEGFA-217ENST00000518538 ABCC6O95255 1503 aa30.32■■■□□ 2.44
VEGFA-217ENST00000518538 ZEB1P37275 1124 aaPredicted RBP30.31■■■□□ 2.44
VEGFA-217ENST00000518538 COL5A2P05997 1499 aaPredicted RBP30.31■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms