RNA–Protein interactions for RNA: ENST00000517924.5

LAPTM4B-202, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 5

Gene LAPTM4B, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-202ENST00000517924 POLR3AO14802 1390 aaPredicted RBP35.33■■■■□ 3.25
LAPTM4B-202ENST00000517924 ACEP12821 1306 aa35.32■■■■□ 3.25
LAPTM4B-202ENST00000517924 TONSLQ96HA7 1378 aa35.31■■■■□ 3.24
LAPTM4B-202ENST00000517924 PLEKHG3A1L390 1219 aa35.3■■■■□ 3.24
LAPTM4B-202ENST00000517924 PPIP5K1Q6PFW1 1433 aa35.29■■■■□ 3.24
LAPTM4B-202ENST00000517924 NWD2Q9ULI1 1742 aa35.29■■■■□ 3.24
LAPTM4B-202ENST00000517924 UNC5CLQ8IV45 518 aa35.28■■■■□ 3.24
LAPTM4B-202ENST00000517924 FAM83GA6ND36 823 aa35.27■■■■□ 3.24
LAPTM4B-202ENST00000517924 UPF1Q92900 1129 aaKnown RBP eCLIP35.27■■■■□ 3.24
LAPTM4B-202ENST00000517924 GLI3P10071 1580 aa35.26■■■■□ 3.24
LAPTM4B-202ENST00000517924 GJD4Q96KN9 370 aaPredicted RBP35.24■■■■□ 3.23
LAPTM4B-202ENST00000517924 PHRF1Q9P1Y6 1649 aaKnown RBP35.24■■■■□ 3.23
LAPTM4B-202ENST00000517924 NUTM2GQ5VZR2 741 aa35.23■■■■□ 3.23
LAPTM4B-202ENST00000517924 RALGAPBQ86X10 1494 aa35.22■■■■□ 3.23
LAPTM4B-202ENST00000517924 NRAPQ86VF7 1730 aa35.22■■■■□ 3.23
LAPTM4B-202ENST00000517924 COL14A1Q05707 1796 aaKnown RBP35.2■■■■□ 3.23
LAPTM4B-202ENST00000517924 EVC2Q86UK5 1308 aa35.19■■■■□ 3.22
LAPTM4B-202ENST00000517924 CARD11Q9BXL7 1154 aa35.18■■■■□ 3.22
LAPTM4B-202ENST00000517924 CABP1Q9NZU7 370 aa35.18■■■■□ 3.22
LAPTM4B-202ENST00000517924 BRWD3Q6RI45 1802 aa35.14■■■■□ 3.22
LAPTM4B-202ENST00000517924 VPS72Q15906 364 aa35.13■■■■□ 3.21
LAPTM4B-202ENST00000517924 BTG4Q9NY30 223 aa35.12■■■■□ 3.21
LAPTM4B-202ENST00000517924 ABTB2Q8N961 1025 aa35.11■■■■□ 3.21
LAPTM4B-202ENST00000517924 NRKQ7Z2Y5 1582 aa35.1■■■■□ 3.21
LAPTM4B-202ENST00000517924 USP6P35125 1406 aa35.1■■■■□ 3.21
LAPTM4B-202ENST00000517924 CCDC9Q9Y3X0 531 aaKnown RBP35.09■■■■□ 3.21
LAPTM4B-202ENST00000517924 AKAP12Q02952 1782 aa35.09■■■■□ 3.21
LAPTM4B-202ENST00000517924 KIAA0232Q92628 1395 aa35.09■■■■□ 3.21
LAPTM4B-202ENST00000517924 PRDM11Q9NQV5 511 aa35.08■■■■□ 3.21
LAPTM4B-202ENST00000517924 CHRNA2Q15822 529 aa35.07■■■■□ 3.2
LAPTM4B-202ENST00000517924 ATAD2Q6PL18 1390 aa35.06■■■■□ 3.2
LAPTM4B-202ENST00000517924 SBNO2Q9Y2G9 1366 aa35.06■■■■□ 3.2
LAPTM4B-202ENST00000517924 ZC3H6P61129 1189 aaKnown RBP35.06■■■■□ 3.2
LAPTM4B-202ENST00000517924 EP400Q96L91 3159 aa35.05■■■■□ 3.2
LAPTM4B-202ENST00000517924 USP19O94966 1318 aa35.04■■■■□ 3.2
LAPTM4B-202ENST00000517924 PIK3C2AO00443 1686 aa35.03■■■■□ 3.2
LAPTM4B-202ENST00000517924 PCGF6Q9BYE7 350 aa35.03■■■■□ 3.2
LAPTM4B-202ENST00000517924 SSH2Q76I76 1423 aa35.03■■■■□ 3.2
LAPTM4B-202ENST00000517924 SEPT12Q8IYM1 358 aa35■■■■□ 3.19
LAPTM4B-202ENST00000517924 BRD4O60885 1362 aaPredicted RBP35■■■■□ 3.19
LAPTM4B-202ENST00000517924 NLRP13Q86W25 1043 aa34.98■■■■□ 3.19
LAPTM4B-202ENST00000517924 ONECUT3O60422 494 aaPredicted RBP34.96■■■■□ 3.19
LAPTM4B-202ENST00000517924 LMO7Q8WWI1 1683 aa34.95■■■■□ 3.19
LAPTM4B-202ENST00000517924 MON2Q7Z3U7 1717 aa34.95■■■■□ 3.19
LAPTM4B-202ENST00000517924 CPSF1Q10570 1443 aaKnown RBP34.95■■■■□ 3.19
LAPTM4B-202ENST00000517924 GCP02774 474 aa34.94■■■■□ 3.18
LAPTM4B-202ENST00000517924 FAM98CQ17RN3 349 aaKnown RBP34.94■■■■□ 3.18
LAPTM4B-202ENST00000517924 SPATA31A5Q5VU36 1347 aa34.94■■■■□ 3.18
LAPTM4B-202ENST00000517924 SPATA31A7Q8IWB4 1347 aa34.94■■■■□ 3.18
LAPTM4B-202ENST00000517924 CAMTA1Q9Y6Y1 1673 aa34.93■■■■□ 3.18
LAPTM4B-202ENST00000517924 NLRP6P59044 892 aa34.93■■■■□ 3.18
LAPTM4B-202ENST00000517924 SLIT3O75094 1523 aa34.92■■■■□ 3.18
LAPTM4B-202ENST00000517924 CPDO75976 1380 aa34.92■■■■□ 3.18
LAPTM4B-202ENST00000517924 STRN4Q9NRL3 753 aa34.92■■■■□ 3.18
LAPTM4B-202ENST00000517924 TTC21BQ7Z4L5 1316 aa34.91■■■■□ 3.18
LAPTM4B-202ENST00000517924 ST20-MTHFSA0A0A6YYL1 179 aa34.91■■■■□ 3.18
LAPTM4B-202ENST00000517924 CD163L1Q9NR16 1453 aa34.9■■■■□ 3.18
LAPTM4B-202ENST00000517924 TESK2Q96S53 571 aa34.9■■■■□ 3.18
LAPTM4B-202ENST00000517924 ZNF692Q9BU19 519 aaPredicted RBP34.9■■■■□ 3.18
LAPTM4B-202ENST00000517924 A0A0G2JS52 829 aa34.89■■■■□ 3.18
LAPTM4B-202ENST00000517924 MYT1Q01538 1121 aa34.89■■■■□ 3.18
LAPTM4B-202ENST00000517924 KTN1Q86UP2 1357 aaKnown RBP34.88■■■■□ 3.17
LAPTM4B-202ENST00000517924 THSD7AQ9UPZ6 1657 aa34.88■■■■□ 3.17
LAPTM4B-202ENST00000517924 SPATA31A1Q5TZJ5 1347 aa34.85■■■■□ 3.17
LAPTM4B-202ENST00000517924 TMC1Q8TDI8 760 aa34.85■■■■□ 3.17
LAPTM4B-202ENST00000517924 SLC12A5Q9H2X9 1139 aa34.85■■■■□ 3.17
LAPTM4B-202ENST00000517924 ZBTB7CA1YPR0 619 aa34.84■■■■□ 3.17
LAPTM4B-202ENST00000517924 KRT27Q7Z3Y8 459 aa34.84■■■■□ 3.17
LAPTM4B-202ENST00000517924 COL18A1P39060 1754 aa34.82■■■■□ 3.17
LAPTM4B-202ENST00000517924 TTC21AQ8NDW8 1320 aa34.81■■■■□ 3.16
LAPTM4B-202ENST00000517924 EVA1CP58658 441 aa34.81■■■■□ 3.16
LAPTM4B-202ENST00000517924 LARP1Q6PKG0 1096 aaKnown RBP34.81■■■■□ 3.16
LAPTM4B-202ENST00000517924 ZRANB1Q9UGI0 708 aa34.81■■■■□ 3.16
LAPTM4B-202ENST00000517924 CLSPNQ9HAW4 1339 aa34.81■■■■□ 3.16
LAPTM4B-202ENST00000517924 USP47Q96K76 1375 aa34.8■■■■□ 3.16
LAPTM4B-202ENST00000517924 USP35Q9P2H5 1018 aa34.8■■■■□ 3.16
LAPTM4B-202ENST00000517924 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.79■■■■□ 3.16
LAPTM4B-202ENST00000517924 RGPD5Q99666 1765 aa34.79■■■■□ 3.16
LAPTM4B-202ENST00000517924 COL5A2P05997 1499 aaPredicted RBP34.78■■■■□ 3.16
LAPTM4B-202ENST00000517924 SOX12O15370 315 aa34.77■■■■□ 3.16
LAPTM4B-202ENST00000517924 FAM182BQ5T319 152 aa34.76■■■■□ 3.16
LAPTM4B-202ENST00000517924 NFAT5O94916 1531 aa34.76■■■■□ 3.15
LAPTM4B-202ENST00000517924 A0A1W2PP64 1363 aa34.75■■■■□ 3.15
LAPTM4B-202ENST00000517924 PUS7Q96PZ0 661 aaKnown RBP34.75■■■■□ 3.15
LAPTM4B-202ENST00000517924 USP54Q70EL1 1684 aa34.75■■■■□ 3.15
LAPTM4B-202ENST00000517924 AATKQ6ZMQ8 1374 aa34.74■■■■□ 3.15
LAPTM4B-202ENST00000517924 BLMP54132 1417 aaPredicted RBP34.74■■■■□ 3.15
LAPTM4B-202ENST00000517924 NME9Q86XW9 330 aa34.74■■■■□ 3.15
LAPTM4B-202ENST00000517924 CCDC125Q86Z20 511 aa34.74■■■■□ 3.15
LAPTM4B-202ENST00000517924 HDGFL2Q7Z4V5 671 aaPredicted RBP34.72■■■■□ 3.15
LAPTM4B-202ENST00000517924 TIMELESSQ9UNS1 1208 aa34.72■■■■□ 3.15
LAPTM4B-202ENST00000517924 AXIN2Q9Y2T1 843 aa34.71■■■■□ 3.15
LAPTM4B-202ENST00000517924 ARHGEF25Q86VW2 580 aa34.7■■■■□ 3.15
LAPTM4B-202ENST00000517924 EDC4Q6P2E9 1401 aaKnown RBP34.7■■■■□ 3.15
LAPTM4B-202ENST00000517924 USP31Q70CQ4 1352 aa34.68■■■■□ 3.14
LAPTM4B-202ENST00000517924 KCNH5Q8NCM2 988 aa34.68■■■■□ 3.14
LAPTM4B-202ENST00000517924 TERF2IPQ9NYB0 399 aa34.68■■■■□ 3.14
LAPTM4B-202ENST00000517924 BARGINQ6ZT62 677 aa34.67■■■■□ 3.14
LAPTM4B-202ENST00000517924 DEFB132Q7Z7B7 95 aa34.67■■■■□ 3.14
LAPTM4B-202ENST00000517924 TCP11L2Q8N4U5 519 aa34.67■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms