RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 USP6P35125 1406 aa14.42□□□□□ -0.1
PABPC1-203ENST00000517921 CCER2I3L3R5 266 aa14.42□□□□□ -0.1
PABPC1-203ENST00000517921 ACEP12821 1306 aa14.41□□□□□ -0.1
PABPC1-203ENST00000517921 SSH2Q76I76 1423 aa14.41□□□□□ -0.1
PABPC1-203ENST00000517921 MYBBP1AQ9BQG0 1328 aaKnown RBP14.4□□□□□ -0.1
PABPC1-203ENST00000517921 PMFBP1Q8TBY8 1022 aa14.39□□□□□ -0.11
PABPC1-203ENST00000517921 ILDR2Q71H61 639 aa14.38□□□□□ -0.11
PABPC1-203ENST00000517921 ZNF692Q9BU19 519 aaPredicted RBP14.38□□□□□ -0.11
PABPC1-203ENST00000517921 PHF8Q9UPP1 1060 aa14.38□□□□□ -0.11
PABPC1-203ENST00000517921 ALS2Q96Q42 1657 aa14.38□□□□□ -0.11
PABPC1-203ENST00000517921 ATF3P18847 181 aa14.37□□□□□ -0.11
PABPC1-203ENST00000517921 CCDC184Q52MB2 194 aa14.37□□□□□ -0.11
PABPC1-203ENST00000517921 CADPS2Q86UW7 1296 aa14.37□□□□□ -0.11
PABPC1-203ENST00000517921 SLAIN2Q9P270 581 aa14.37□□□□□ -0.11
PABPC1-203ENST00000517921 NHSL1Q5SYE7 1610 aa14.37□□□□□ -0.11
PABPC1-203ENST00000517921 FYB1O15117 783 aa14.36□□□□□ -0.11
PABPC1-203ENST00000517921 NGDNQ8NEJ9 315 aaKnown RBP14.36□□□□□ -0.11
PABPC1-203ENST00000517921 TTC21BQ7Z4L5 1316 aa14.36□□□□□ -0.11
PABPC1-203ENST00000517921 SHPRHQ149N8 1683 aa14.36□□□□□ -0.11
PABPC1-203ENST00000517921 BRD4O60885 1362 aaPredicted RBP14.35□□□□□ -0.11
PABPC1-203ENST00000517921 OVOS2A0A0J9YW53 1432 aa14.35□□□□□ -0.11
PABPC1-203ENST00000517921 OVOS2Q6IE36 1432 aa14.35□□□□□ -0.11
PABPC1-203ENST00000517921 ESCO1Q5FWF5 840 aa14.35□□□□□ -0.11
PABPC1-203ENST00000517921 NLRP13Q86W25 1043 aa14.35□□□□□ -0.11
PABPC1-203ENST00000517921 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.35□□□□□ -0.11
PABPC1-203ENST00000517921 PPP2R1AP30153 589 aa14.34□□□□□ -0.11
PABPC1-203ENST00000517921 ORAI2Q96SN7 254 aa14.34□□□□□ -0.11
PABPC1-203ENST00000517921 GGNBP2Q9H3C7 697 aa14.34□□□□□ -0.11
PABPC1-203ENST00000517921 LTN1O94822 1766 aa14.33□□□□□ -0.12
PABPC1-203ENST00000517921 MORC1Q86VD1 984 aa14.33□□□□□ -0.12
PABPC1-203ENST00000517921 NME9Q86XW9 330 aa14.33□□□□□ -0.12
PABPC1-203ENST00000517921 MRS2Q9HD23 443 aa14.33□□□□□ -0.12
PABPC1-203ENST00000517921 TTC21AQ8NDW8 1320 aa14.33□□□□□ -0.12
PABPC1-203ENST00000517921 CRYBG1Q9Y4K1 1723 aa14.32□□□□□ -0.12
PABPC1-203ENST00000517921 ROBO1Q9Y6N7 1651 aa14.32□□□□□ -0.12
PABPC1-203ENST00000517921 MED1Q15648 1581 aaPredicted RBP14.31□□□□□ -0.12
PABPC1-203ENST00000517921 PXDNQ92626 1479 aa14.31□□□□□ -0.12
PABPC1-203ENST00000517921 ZRANB1Q9UGI0 708 aa14.3□□□□□ -0.12
PABPC1-203ENST00000517921 USP31Q70CQ4 1352 aa14.3□□□□□ -0.12
PABPC1-203ENST00000517921 PHRF1Q9P1Y6 1649 aaKnown RBP14.3□□□□□ -0.12
PABPC1-203ENST00000517921 PEAK1Q9H792 1746 aa14.29□□□□□ -0.12
PABPC1-203ENST00000517921 SMG6Q86US8 1419 aaKnown RBP14.29□□□□□ -0.12
PABPC1-203ENST00000517921 SOCS7O14512 581 aa14.28□□□□□ -0.12
PABPC1-203ENST00000517921 COL3A1P02461 1466 aaPredicted RBP14.28□□□□□ -0.12
PABPC1-203ENST00000517921 TNNT2P45379 298 aaPredicted RBP14.28□□□□□ -0.12
PABPC1-203ENST00000517921 ABCA3Q99758 1704 aa14.28□□□□□ -0.12
PABPC1-203ENST00000517921 FOXO3O43524 673 aa14.27□□□□□ -0.13
PABPC1-203ENST00000517921 COG3Q96JB2 828 aa14.27□□□□□ -0.13
PABPC1-203ENST00000517921 AHDC1Q5TGY3 1603 aaPredicted RBP14.26□□□□□ -0.13
PABPC1-203ENST00000517921 SLIT3O75094 1523 aa14.26□□□□□ -0.13
PABPC1-203ENST00000517921 NFAT5O94916 1531 aa14.26□□□□□ -0.13
PABPC1-203ENST00000517921 AATKQ6ZMQ8 1374 aa14.26□□□□□ -0.13
PABPC1-203ENST00000517921 NPHP3Q7Z494 1330 aa14.26□□□□□ -0.13
PABPC1-203ENST00000517921 PSME1Q06323 249 aa14.26□□□□□ -0.13
PABPC1-203ENST00000517921 BRINP3Q76B58 766 aa14.26□□□□□ -0.13
PABPC1-203ENST00000517921 CDK12Q9NYV4 1490 aaPredicted RBP14.25□□□□□ -0.13
PABPC1-203ENST00000517921 XPCQ01831 940 aaPredicted RBP14.25□□□□□ -0.13
PABPC1-203ENST00000517921 TNS3Q68CZ2 1445 aa14.24□□□□□ -0.13
PABPC1-203ENST00000517921 SBNO1A3KN83 1393 aa14.24□□□□□ -0.13
PABPC1-203ENST00000517921 PAK3O75914 559 aaPredicted RBP14.24□□□□□ -0.13
PABPC1-203ENST00000517921 KRT28Q7Z3Y7 464 aa14.24□□□□□ -0.13
PABPC1-203ENST00000517921 PNISRQ8TF01 805 aaKnown RBP14.24□□□□□ -0.13
PABPC1-203ENST00000517921 DDX17Q92841 729 aaKnown RBP14.24□□□□□ -0.13
PABPC1-203ENST00000517921 RGPD5Q99666 1765 aa14.24□□□□□ -0.13
PABPC1-203ENST00000517921 PHLPP1O60346 1717 aa14.24□□□□□ -0.13
PABPC1-203ENST00000517921 MTHFSP49914 203 aa14.23□□□□□ -0.13
PABPC1-203ENST00000517921 JCADQ9P266 1359 aa14.22□□□□□ -0.13
PABPC1-203ENST00000517921 ABTB2Q8N961 1025 aa14.22□□□□□ -0.13
PABPC1-203ENST00000517921 YTHDC1Q96MU7 727 aaKnown RBP14.22□□□□□ -0.13
PABPC1-203ENST00000517921 FBLN1P23142 703 aa14.21□□□□□ -0.13
PABPC1-203ENST00000517921 NLRP6P59044 892 aa14.21□□□□□ -0.13
PABPC1-203ENST00000517921 NUTM2GQ5VZR2 741 aa14.21□□□□□ -0.13
PABPC1-203ENST00000517921 FAM9BQ8IZU0 186 aa14.21□□□□□ -0.13
PABPC1-203ENST00000517921 POLKQ9UBT6 870 aa14.21□□□□□ -0.13
PABPC1-203ENST00000517921 RGPD1P0DJD0 1748 aa14.21□□□□□ -0.14
PABPC1-203ENST00000517921 INSRP06213 1382 aa14.21□□□□□ -0.14
PABPC1-203ENST00000517921 PNPLA6Q8IY17 1366 aa14.21□□□□□ -0.14
PABPC1-203ENST00000517921 USP19O94966 1318 aa14.2□□□□□ -0.14
PABPC1-203ENST00000517921 SOS2Q07890 1332 aaPredicted RBP14.2□□□□□ -0.14
PABPC1-203ENST00000517921 COL16A1Q07092 1604 aaPredicted RBP14.2□□□□□ -0.14
PABPC1-203ENST00000517921 BLMP54132 1417 aaPredicted RBP14.2□□□□□ -0.14
PABPC1-203ENST00000517921 RGPD2P0DJD1 1756 aa14.19□□□□□ -0.14
PABPC1-203ENST00000517921 RRS1Q15050 365 aaKnown RBP14.19□□□□□ -0.14
PABPC1-203ENST00000517921 EMILIN1Q9Y6C2 1016 aa14.19□□□□□ -0.14
PABPC1-203ENST00000517921 COL22A1Q8NFW1 1626 aaPredicted RBP14.19□□□□□ -0.14
PABPC1-203ENST00000517921 SPATA31A3Q5VYP0 1347 aa14.18□□□□□ -0.14
PABPC1-203ENST00000517921 MEX3CQ5U5Q3 659 aaKnown RBP14.18□□□□□ -0.14
PABPC1-203ENST00000517921 CFAP53Q96M91 514 aa14.18□□□□□ -0.14
PABPC1-203ENST00000517921 COL18A1P39060 1754 aa14.18□□□□□ -0.14
PABPC1-203ENST00000517921 ARHGEF10O15013 1369 aa14.18□□□□□ -0.14
PABPC1-203ENST00000517921 MAP3K19Q56UN5 1328 aa14.15□□□□□ -0.14
PABPC1-203ENST00000517921 SPATA31A6Q5VVP1 1343 aa14.15□□□□□ -0.14
PABPC1-203ENST00000517921 RTL1A6NKG5 1358 aa14.15□□□□□ -0.14
PABPC1-203ENST00000517921 FLT4P35916 1363 aa14.15□□□□□ -0.14
PABPC1-203ENST00000517921 KIF24Q5T7B8 1368 aa14.15□□□□□ -0.14
PABPC1-203ENST00000517921 SOX12O15370 315 aa14.15□□□□□ -0.14
PABPC1-203ENST00000517921 WDR43Q15061 677 aaKnown RBP eCLIP14.15□□□□□ -0.14
PABPC1-203ENST00000517921 LMOD2Q6P5Q4 547 aa14.15□□□□□ -0.14
PABPC1-203ENST00000517921 LRRC59Q96AG4 307 aaKnown RBP14.15□□□□□ -0.14
PABPC1-203ENST00000517921 RGS17Q9UGC6 210 aaPredicted RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms