RNA–Protein interactions for RNA: ENST00000516884.1

SNORA40.15-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 107 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.15-201ENST00000516884 KLF16Q9BXK1 252 aaPredicted RBP6.29□□□□□ -1.4
SNORA40.15-201ENST00000516884 TLL2Q9Y6L7 1015 aa6.29□□□□□ -1.4
SNORA40.15-201ENST00000516884 WASF2Q9Y6W5 498 aa6.29□□□□□ -1.4
SNORA40.15-201ENST00000516884 CFAP99D6REC4 459 aa6.28□□□□□ -1.4
SNORA40.15-201ENST00000516884 TRIM66O15016 1216 aa6.28□□□□□ -1.4
SNORA40.15-201ENST00000516884 BMP1P13497 986 aa6.28□□□□□ -1.4
SNORA40.15-201ENST00000516884 INSM1Q01101 510 aaPredicted RBP6.28□□□□□ -1.4
SNORA40.15-201ENST00000516884 LINC01559Q495D7 138 aa6.28□□□□□ -1.4
SNORA40.15-201ENST00000516884 PRPF38BQ5VTL8 546 aaKnown RBP6.28□□□□□ -1.4
SNORA40.15-201ENST00000516884 TUSC1Q2TAM9 212 aa6.27□□□□□ -1.41
SNORA40.15-201ENST00000516884 CDK15Q96Q40 435 aa6.27□□□□□ -1.41
SNORA40.15-201ENST00000516884 NXF1Q9UBU9 619 aaKnown RBP6.27□□□□□ -1.41
SNORA40.15-201ENST00000516884 PCDHB15Q9Y5E8 787 aa6.27□□□□□ -1.41
SNORA40.15-201ENST00000516884 HRCP23327 699 aa6.26□□□□□ -1.41
SNORA40.15-201ENST00000516884 LORP23490 312 aaPredicted RBP6.26□□□□□ -1.41
SNORA40.15-201ENST00000516884 ZBTB3Q9H5J0 574 aa6.26□□□□□ -1.41
SNORA40.15-201ENST00000516884 PLEKHG3A1L390 1219 aa6.25□□□□□ -1.41
SNORA40.15-201ENST00000516884 H3BM21 787 aa6.25□□□□□ -1.41
SNORA40.15-201ENST00000516884 TIMP2P16035 220 aa6.25□□□□□ -1.41
SNORA40.15-201ENST00000516884 NNTQ13423 1086 aa6.25□□□□□ -1.41
SNORA40.15-201ENST00000516884 ADH1CP00326 375 aa6.24□□□□□ -1.41
SNORA40.15-201ENST00000516884 RIC3Q7Z5B4 369 aa6.24□□□□□ -1.41
SNORA40.15-201ENST00000516884 AK7Q96M32 723 aa6.24□□□□□ -1.41
SNORA40.15-201ENST00000516884 ZFP42Q96MM3 310 aa6.24□□□□□ -1.41
SNORA40.15-201ENST00000516884 MAP10Q9P2G4 905 aa6.24□□□□□ -1.41
SNORA40.15-201ENST00000516884 C4orf48Q5BLP8 95 aa6.23□□□□□ -1.41
SNORA40.15-201ENST00000516884 FAM174AQ8TBP5 190 aa6.23□□□□□ -1.41
SNORA40.15-201ENST00000516884 C1QTNF2Q9BXJ5 285 aa6.23□□□□□ -1.41
SNORA40.15-201ENST00000516884 PER1O15534 1290 aaPredicted RBP6.22□□□□□ -1.41
SNORA40.15-201ENST00000516884 MYSM1Q5VVJ2 828 aa6.22□□□□□ -1.41
SNORA40.15-201ENST00000516884 MRPL14Q6P1L8 145 aaKnown RBP6.22□□□□□ -1.41
SNORA40.15-201ENST00000516884 CABLES1Q8TDN4 633 aa6.22□□□□□ -1.41
SNORA40.15-201ENST00000516884 SLC16A10Q8TF71 515 aa6.22□□□□□ -1.41
SNORA40.15-201ENST00000516884 FOXJ1Q92949 421 aa6.22□□□□□ -1.41
SNORA40.15-201ENST00000516884 LIMD1Q9UGP4 676 aa6.22□□□□□ -1.41
SNORA40.15-201ENST00000516884 LILRB3O75022 631 aa6.21□□□□□ -1.42
SNORA40.15-201ENST00000516884 VSIG8P0DPA2 414 aa6.21□□□□□ -1.42
SNORA40.15-201ENST00000516884 CTHP32929 405 aa6.21□□□□□ -1.42
SNORA40.15-201ENST00000516884 GMPRP36959 345 aa6.21□□□□□ -1.42
SNORA40.15-201ENST00000516884 SH3RF1Q7Z6J0 888 aa6.21□□□□□ -1.42
SNORA40.15-201ENST00000516884 IRF7Q92985 503 aa6.21□□□□□ -1.42
SNORA40.15-201ENST00000516884 ERBB4Q15303 1308 aa6.21□□□□□ -1.42
SNORA40.15-201ENST00000516884 NR3C2P08235 984 aa6.2□□□□□ -1.42
SNORA40.15-201ENST00000516884 GRM5P41594 1212 aa6.2□□□□□ -1.42
SNORA40.15-201ENST00000516884 WDR4P57081 412 aaKnown RBP6.2□□□□□ -1.42
SNORA40.15-201ENST00000516884 PDE4DQ08499 809 aa6.2□□□□□ -1.42
SNORA40.15-201ENST00000516884 NR5A1Q13285 461 aa6.2□□□□□ -1.42
SNORA40.15-201ENST00000516884 QPCTQ16769 361 aa6.2□□□□□ -1.42
SNORA40.15-201ENST00000516884 TRMT44Q8IYL2 757 aaKnown RBP6.19□□□□□ -1.42
SNORA40.15-201ENST00000516884 MAP4K5Q9Y4K4 846 aa6.19□□□□□ -1.42
SNORA40.15-201ENST00000516884 SH3BP5LQ7L8J4 393 aa6.18□□□□□ -1.42
SNORA40.15-201ENST00000516884 BPHLQ86WA6 291 aaPredicted RBP6.18□□□□□ -1.42
SNORA40.15-201ENST00000516884 ITPKCQ96DU7 683 aa6.18□□□□□ -1.42
SNORA40.15-201ENST00000516884 SCARF1Q14162 830 aa6.17□□□□□ -1.42
SNORA40.15-201ENST00000516884 MEIOBQ8N635 442 aa6.17□□□□□ -1.42
SNORA40.15-201ENST00000516884 ARMC2Q8NEN0 867 aa6.17□□□□□ -1.42
SNORA40.15-201ENST00000516884 PURBQ96QR8 312 aaKnown RBP6.17□□□□□ -1.42
SNORA40.15-201ENST00000516884 ZFAND3Q9H8U3 227 aa6.17□□□□□ -1.42
SNORA40.15-201ENST00000516884 ZIC2O95409 532 aaPredicted RBP6.16□□□□□ -1.42
SNORA40.15-201ENST00000516884 VEGFBP49765 207 aa6.16□□□□□ -1.42
SNORA40.15-201ENST00000516884 RTL5Q5HYW3 569 aaPredicted RBP6.15□□□□□ -1.42
SNORA40.15-201ENST00000516884 NBPF14Q5TI25 921 aa6.15□□□□□ -1.42
SNORA40.15-201ENST00000516884 ZSCAN1Q8NBB4 408 aa6.15□□□□□ -1.42
SNORA40.15-201ENST00000516884 GPKOWQ92917 476 aaPredicted RBP eCLIP6.15□□□□□ -1.42
SNORA40.15-201ENST00000516884 CLK2P49760 499 aaKnown RBP6.14□□□□□ -1.43
SNORA40.15-201ENST00000516884 CSPP1Q1MSJ5 1256 aa6.14□□□□□ -1.43
SNORA40.15-201ENST00000516884 HELBQ8NG08 1087 aaPredicted RBP6.14□□□□□ -1.43
SNORA40.15-201ENST00000516884 FAM181BA6NEQ2 426 aa6.13□□□□□ -1.43
SNORA40.15-201ENST00000516884 SOBPA7XYQ1 873 aa6.13□□□□□ -1.43
SNORA40.15-201ENST00000516884 ARID5BQ14865 1188 aa6.13□□□□□ -1.43
SNORA40.15-201ENST00000516884 LINC00528Q8N1L1 170 aa6.13□□□□□ -1.43
SNORA40.15-201ENST00000516884 SOS2Q07890 1332 aaPredicted RBP6.13□□□□□ -1.43
SNORA40.15-201ENST00000516884 NUTM2BA6NNL0 878 aaPredicted RBP6.12□□□□□ -1.43
SNORA40.15-201ENST00000516884 NUTM2EB1AL46 878 aaPredicted RBP6.12□□□□□ -1.43
SNORA40.15-201ENST00000516884 FSHRP23945 695 aa6.12□□□□□ -1.43
SNORA40.15-201ENST00000516884 NUTM2DQ5VT03 806 aaPredicted RBP6.12□□□□□ -1.43
SNORA40.15-201ENST00000516884 NUTM2AQ8IVF1 878 aaPredicted RBP6.12□□□□□ -1.43
SNORA40.15-201ENST00000516884 RSPH6AQ9H0K4 717 aa6.12□□□□□ -1.43
SNORA40.15-201ENST00000516884 SLC24A3Q9HC58 644 aa6.12□□□□□ -1.43
SNORA40.15-201ENST00000516884 AGERQ15109 404 aa6.11□□□□□ -1.43
SNORA40.15-201ENST00000516884 ERFEQ4G0M1 354 aa6.11□□□□□ -1.43
SNORA40.15-201ENST00000516884 DNMT3LQ9UJW3 386 aa6.11□□□□□ -1.43
SNORA40.15-201ENST00000516884 MAN1A2O60476 641 aa6.1□□□□□ -1.43
SNORA40.15-201ENST00000516884 EMILIN1Q9Y6C2 1016 aa6.1□□□□□ -1.43
SNORA40.15-201ENST00000516884 PPFIA3O75145 1194 aa6.09□□□□□ -1.43
SNORA40.15-201ENST00000516884 CTDSPL2Q05D32 466 aa6.09□□□□□ -1.43
SNORA40.15-201ENST00000516884 C6orf118Q5T5N4 469 aa6.09□□□□□ -1.43
SNORA40.15-201ENST00000516884 FBXO31Q5XUX0 539 aaPredicted RBP6.09□□□□□ -1.43
SNORA40.15-201ENST00000516884 PDXDC2PQ6P474 469 aa6.09□□□□□ -1.43
SNORA40.15-201ENST00000516884 Q6ZVU0 165 aa6.09□□□□□ -1.43
SNORA40.15-201ENST00000516884 VASH1Q7L8A9 365 aaPredicted RBP6.09□□□□□ -1.43
SNORA40.15-201ENST00000516884 CCDC116Q8IYX3 515 aa6.09□□□□□ -1.43
SNORA40.15-201ENST00000516884 TSC1Q92574 1164 aa6.09□□□□□ -1.43
SNORA40.15-201ENST00000516884 TSEN34Q9BSV6 310 aaKnown RBP6.09□□□□□ -1.43
SNORA40.15-201ENST00000516884 ZC3H4Q9UPT8 1303 aaKnown RBP6.08□□□□□ -1.44
SNORA40.15-201ENST00000516884 BMP2P12643 396 aa6.08□□□□□ -1.44
SNORA40.15-201ENST00000516884 PPP2R2DQ66LE6 453 aa6.08□□□□□ -1.44
SNORA40.15-201ENST00000516884 OCSTAMPQ9BR26 566 aa6.08□□□□□ -1.44
SNORA40.15-201ENST00000516884 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.08□□□□□ -1.44
SNORA40.15-201ENST00000516884 UPP2O95045 317 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms