RNA–Protein interactions for RNA: ENST00000515981.1

SCARNA16-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16-201ENST00000515981 CPSF1Q10570 1443 aaKnown RBP13.49□□□□□ -0.25
SCARNA16-201ENST00000515981 TTC21BQ7Z4L5 1316 aa13.49□□□□□ -0.25
SCARNA16-201ENST00000515981 TERF2IPQ9NYB0 399 aa13.49□□□□□ -0.25
SCARNA16-201ENST00000515981 USP6P35125 1406 aa13.48□□□□□ -0.25
SCARNA16-201ENST00000515981 TNS3Q68CZ2 1445 aa13.48□□□□□ -0.25
SCARNA16-201ENST00000515981 A0A1W2PP64 1363 aa13.48□□□□□ -0.25
SCARNA16-201ENST00000515981 WASHC2AQ641Q2 1341 aa13.48□□□□□ -0.25
SCARNA16-201ENST00000515981 ABTB2Q8N961 1025 aa13.48□□□□□ -0.25
SCARNA16-201ENST00000515981 CARD14Q9BXL6 1004 aa13.48□□□□□ -0.25
SCARNA16-201ENST00000515981 TRPM3Q9HCF6 1732 aaPredicted RBP13.47□□□□□ -0.25
SCARNA16-201ENST00000515981 ADAMTS2O95450 1211 aa13.47□□□□□ -0.25
SCARNA16-201ENST00000515981 PANK3Q9H999 370 aa13.47□□□□□ -0.25
SCARNA16-201ENST00000515981 SSH2Q76I76 1423 aa13.47□□□□□ -0.25
SCARNA16-201ENST00000515981 CCDC7Q96M83 1385 aa13.46□□□□□ -0.25
SCARNA16-201ENST00000515981 NME9Q86XW9 330 aa13.46□□□□□ -0.25
SCARNA16-201ENST00000515981 AKAP12Q02952 1782 aa13.45□□□□□ -0.26
SCARNA16-201ENST00000515981 NLRP6P59044 892 aa13.45□□□□□ -0.26
SCARNA16-201ENST00000515981 ANKRD36BQ8N2N9 1353 aa13.45□□□□□ -0.26
SCARNA16-201ENST00000515981 NINLQ9Y2I6 1382 aa13.45□□□□□ -0.26
SCARNA16-201ENST00000515981 SPATA31A6Q5VVP1 1343 aa13.44□□□□□ -0.26
SCARNA16-201ENST00000515981 LRP6O75581 1613 aa13.44□□□□□ -0.26
SCARNA16-201ENST00000515981 ARHGEF10O15013 1369 aa13.44□□□□□ -0.26
SCARNA16-201ENST00000515981 SHPRHQ149N8 1683 aa13.44□□□□□ -0.26
SCARNA16-201ENST00000515981 HAP1P54257 671 aaPredicted RBP13.43□□□□□ -0.26
SCARNA16-201ENST00000515981 MEX3CQ5U5Q3 659 aaKnown RBP13.43□□□□□ -0.26
SCARNA16-201ENST00000515981 MYOM1P52179 1685 aa13.43□□□□□ -0.26
SCARNA16-201ENST00000515981 ALS2Q96Q42 1657 aa13.43□□□□□ -0.26
SCARNA16-201ENST00000515981 SOX12O15370 315 aa13.42□□□□□ -0.26
SCARNA16-201ENST00000515981 NLRP13Q86W25 1043 aa13.42□□□□□ -0.26
SCARNA16-201ENST00000515981 BRD4O60885 1362 aaPredicted RBP13.42□□□□□ -0.26
SCARNA16-201ENST00000515981 MON2Q7Z3U7 1717 aa13.42□□□□□ -0.26
SCARNA16-201ENST00000515981 TTC21AQ8NDW8 1320 aa13.41□□□□□ -0.26
SCARNA16-201ENST00000515981 EDC4Q6P2E9 1401 aaKnown RBP13.41□□□□□ -0.26
SCARNA16-201ENST00000515981 FYB1O15117 783 aa13.41□□□□□ -0.26
SCARNA16-201ENST00000515981 ZC3H6P61129 1189 aaKnown RBP13.41□□□□□ -0.26
SCARNA16-201ENST00000515981 GGNBP2Q9H3C7 697 aa13.41□□□□□ -0.26
SCARNA16-201ENST00000515981 NSD3Q9BZ95 1437 aa13.4□□□□□ -0.26
SCARNA16-201ENST00000515981 FBLN1P23142 703 aa13.4□□□□□ -0.26
SCARNA16-201ENST00000515981 C8orf37Q96NL8 207 aa13.4□□□□□ -0.26
SCARNA16-201ENST00000515981 MED1Q15648 1581 aaPredicted RBP13.4□□□□□ -0.26
SCARNA16-201ENST00000515981 COL22A1Q8NFW1 1626 aaPredicted RBP13.39□□□□□ -0.27
SCARNA16-201ENST00000515981 ZBTB7CA1YPR0 619 aa13.39□□□□□ -0.27
SCARNA16-201ENST00000515981 FAM83GA6ND36 823 aa13.39□□□□□ -0.27
SCARNA16-201ENST00000515981 GCP02774 474 aa13.39□□□□□ -0.27
SCARNA16-201ENST00000515981 NGLY1Q96IV0 654 aa13.39□□□□□ -0.27
SCARNA16-201ENST00000515981 PIK3C2AO00443 1686 aa13.39□□□□□ -0.27
SCARNA16-201ENST00000515981 USP19O94966 1318 aa13.39□□□□□ -0.27
SCARNA16-201ENST00000515981 NRKQ7Z2Y5 1582 aa13.38□□□□□ -0.27
SCARNA16-201ENST00000515981 CNGB1Q14028 1251 aaPredicted RBP13.38□□□□□ -0.27
SCARNA16-201ENST00000515981 CHRNA2Q15822 529 aa13.38□□□□□ -0.27
SCARNA16-201ENST00000515981 USP31Q70CQ4 1352 aa13.37□□□□□ -0.27
SCARNA16-201ENST00000515981 RGS17Q9UGC6 210 aaPredicted RBP13.37□□□□□ -0.27
SCARNA16-201ENST00000515981 DDX10Q13206 875 aaKnown RBP13.36□□□□□ -0.27
SCARNA16-201ENST00000515981 COG3Q96JB2 828 aa13.36□□□□□ -0.27
SCARNA16-201ENST00000515981 PHF23Q9BUL5 403 aaPredicted RBP13.36□□□□□ -0.27
SCARNA16-201ENST00000515981 AFF2P51816 1311 aa13.36□□□□□ -0.27
SCARNA16-201ENST00000515981 KIAA0232Q92628 1395 aa13.35□□□□□ -0.27
SCARNA16-201ENST00000515981 PER1O15534 1290 aaPredicted RBP13.35□□□□□ -0.27
SCARNA16-201ENST00000515981 KNSTRNQ9Y448 316 aa13.35□□□□□ -0.27
SCARNA16-201ENST00000515981 ABCA3Q99758 1704 aa13.34□□□□□ -0.27
SCARNA16-201ENST00000515981 MARF1Q9Y4F3 1742 aaKnown RBP13.34□□□□□ -0.27
SCARNA16-201ENST00000515981 ZNF316A6NFI3 1004 aaPredicted RBP13.34□□□□□ -0.27
SCARNA16-201ENST00000515981 PRDM11Q9NQV5 511 aa13.34□□□□□ -0.27
SCARNA16-201ENST00000515981 CGNL1Q0VF96 1302 aa13.34□□□□□ -0.27
SCARNA16-201ENST00000515981 CRYBG1Q9Y4K1 1723 aa13.33□□□□□ -0.27
SCARNA16-201ENST00000515981 TNNT2P45379 298 aaPredicted RBP13.33□□□□□ -0.28
SCARNA16-201ENST00000515981 AMER1Q5JTC6 1135 aaPredicted RBP13.33□□□□□ -0.28
SCARNA16-201ENST00000515981 PHRF1Q9P1Y6 1649 aaKnown RBP13.32□□□□□ -0.28
SCARNA16-201ENST00000515981 OVOS2A0A0J9YW53 1432 aa13.32□□□□□ -0.28
SCARNA16-201ENST00000515981 OVOS2Q6IE36 1432 aa13.32□□□□□ -0.28
SCARNA16-201ENST00000515981 CC2D1BQ5T0F9 858 aaKnown RBP13.32□□□□□ -0.28
SCARNA16-201ENST00000515981 POTEAQ6S8J7 498 aa13.32□□□□□ -0.28
SCARNA16-201ENST00000515981 ARHGEF25Q86VW2 580 aa13.32□□□□□ -0.28
SCARNA16-201ENST00000515981 FNBP4Q8N3X1 1017 aaPredicted RBP13.32□□□□□ -0.28
SCARNA16-201ENST00000515981 KCNH5Q8NCM2 988 aa13.32□□□□□ -0.28
SCARNA16-201ENST00000515981 BTG4Q9NY30 223 aa13.32□□□□□ -0.28
SCARNA16-201ENST00000515981 USP21Q9UK80 565 aa13.32□□□□□ -0.28
SCARNA16-201ENST00000515981 SLIT3O75094 1523 aa13.32□□□□□ -0.28
SCARNA16-201ENST00000515981 RRS1Q15050 365 aaKnown RBP13.31□□□□□ -0.28
SCARNA16-201ENST00000515981 AXIN2Q9Y2T1 843 aa13.31□□□□□ -0.28
SCARNA16-201ENST00000515981 MORC1Q86VD1 984 aa13.3□□□□□ -0.28
SCARNA16-201ENST00000515981 QTRT2Q9H974 415 aaKnown RBP13.3□□□□□ -0.28
SCARNA16-201ENST00000515981 NFAT5O94916 1531 aa13.29□□□□□ -0.28
SCARNA16-201ENST00000515981 UNC5CLQ8IV45 518 aa13.29□□□□□ -0.28
SCARNA16-201ENST00000515981 STRN4Q9NRL3 753 aa13.29□□□□□ -0.28
SCARNA16-201ENST00000515981 KIF20BQ96Q89 1820 aa13.29□□□□□ -0.28
SCARNA16-201ENST00000515981 CPDO75976 1380 aa13.29□□□□□ -0.28
SCARNA16-201ENST00000515981 BCL9LQ86UU0 1499 aa13.29□□□□□ -0.28
SCARNA16-201ENST00000515981 ZNF772Q68DY9 489 aaPredicted RBP13.28□□□□□ -0.28
SCARNA16-201ENST00000515981 MAP3K19Q56UN5 1328 aa13.28□□□□□ -0.28
SCARNA16-201ENST00000515981 SLIT2O94813 1529 aa13.28□□□□□ -0.28
SCARNA16-201ENST00000515981 EVA1CP58658 441 aa13.27□□□□□ -0.29
SCARNA16-201ENST00000515981 EMILIN1Q9Y6C2 1016 aa13.27□□□□□ -0.29
SCARNA16-201ENST00000515981 USP54Q70EL1 1684 aa13.27□□□□□ -0.29
SCARNA16-201ENST00000515981 CAMTA1Q9Y6Y1 1673 aa13.27□□□□□ -0.29
SCARNA16-201ENST00000515981 PPM1GO15355 546 aaPredicted RBP13.26□□□□□ -0.29
SCARNA16-201ENST00000515981 AMPHP49418 695 aa13.26□□□□□ -0.29
SCARNA16-201ENST00000515981 AATKQ6ZMQ8 1374 aa13.26□□□□□ -0.29
SCARNA16-201ENST00000515981 LTV1Q96GA3 475 aaPredicted RBP13.26□□□□□ -0.29
SCARNA16-201ENST00000515981 CCDC9Q9Y3X0 531 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms