RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 ALS2Q96Q42 1657 aa14.07□□□□□ -0.16
NEDD9-214ENST00000513989 ARHGEF28Q8N1W1 1705 aaKnown RBP14.07□□□□□ -0.16
NEDD9-214ENST00000513989 NWD2Q9ULI1 1742 aa14.07□□□□□ -0.16
NEDD9-214ENST00000513989 TRPC5Q9UL62 973 aaPredicted RBP14.06□□□□□ -0.16
NEDD9-214ENST00000513989 CABP2Q9NPB3 220 aa14.05□□□□□ -0.16
NEDD9-214ENST00000513989 CCDC61Q9Y6R9 512 aa14.05□□□□□ -0.16
NEDD9-214ENST00000513989 NRAPQ86VF7 1730 aa14.04□□□□□ -0.16
NEDD9-214ENST00000513989 NUDT16Q96DE0 195 aaKnown RBP14.04□□□□□ -0.16
NEDD9-214ENST00000513989 TNS3Q68CZ2 1445 aa14.04□□□□□ -0.16
NEDD9-214ENST00000513989 TMC1Q8TDI8 760 aa14.03□□□□□ -0.16
NEDD9-214ENST00000513989 ATAD2Q6PL18 1390 aa14.03□□□□□ -0.16
NEDD9-214ENST00000513989 KRT28Q7Z3Y7 464 aa14.02□□□□□ -0.17
NEDD9-214ENST00000513989 ANKARQ7Z5J8 1434 aa14.01□□□□□ -0.17
NEDD9-214ENST00000513989 PHF8Q9UPP1 1060 aa14.01□□□□□ -0.17
NEDD9-214ENST00000513989 SBNO1A3KN83 1393 aa14□□□□□ -0.17
NEDD9-214ENST00000513989 C11orf95C9JLR9 678 aaPredicted RBP14□□□□□ -0.17
NEDD9-214ENST00000513989 TERF2IPQ9NYB0 399 aa14□□□□□ -0.17
NEDD9-214ENST00000513989 CABP1Q9NZU7 370 aa14□□□□□ -0.17
NEDD9-214ENST00000513989 ITSN1Q15811 1721 aa14□□□□□ -0.17
NEDD9-214ENST00000513989 TULP4Q9NRJ4 1543 aa14□□□□□ -0.17
NEDD9-214ENST00000513989 KIF7Q2M1P5 1343 aa13.99□□□□□ -0.17
NEDD9-214ENST00000513989 PRR36Q9H6K5 1346 aa13.99□□□□□ -0.17
NEDD9-214ENST00000513989 CABLES1Q8TDN4 633 aa13.99□□□□□ -0.17
NEDD9-214ENST00000513989 GJD4Q96KN9 370 aaPredicted RBP13.99□□□□□ -0.17
NEDD9-214ENST00000513989 ZNF692Q9BU19 519 aaPredicted RBP13.99□□□□□ -0.17
NEDD9-214ENST00000513989 TOPAZ1Q8N9V7 1692 aa13.98□□□□□ -0.17
NEDD9-214ENST00000513989 HDGFL2Q7Z4V5 671 aaPredicted RBP13.98□□□□□ -0.17
NEDD9-214ENST00000513989 UNC5CLQ8IV45 518 aa13.98□□□□□ -0.17
NEDD9-214ENST00000513989 NGDNQ8NEJ9 315 aaKnown RBP13.98□□□□□ -0.17
NEDD9-214ENST00000513989 CCDC7Q96M83 1385 aa13.97□□□□□ -0.17
NEDD9-214ENST00000513989 NINLQ9Y2I6 1382 aa13.97□□□□□ -0.17
NEDD9-214ENST00000513989 WASHC2AQ641Q2 1341 aa13.97□□□□□ -0.17
NEDD9-214ENST00000513989 PLEKHG3A1L390 1219 aa13.97□□□□□ -0.17
NEDD9-214ENST00000513989 SLC12A5Q9H2X9 1139 aa13.97□□□□□ -0.17
NEDD9-214ENST00000513989 PSME1Q06323 249 aa13.96□□□□□ -0.17
NEDD9-214ENST00000513989 PMFBP1Q8TBY8 1022 aa13.96□□□□□ -0.17
NEDD9-214ENST00000513989 COL14A1Q05707 1796 aaKnown RBP13.96□□□□□ -0.18
NEDD9-214ENST00000513989 ATP7BP35670 1465 aa13.95□□□□□ -0.18
NEDD9-214ENST00000513989 PHRF1Q9P1Y6 1649 aaKnown RBP13.95□□□□□ -0.18
NEDD9-214ENST00000513989 ARHGEF10O15013 1369 aa13.95□□□□□ -0.18
NEDD9-214ENST00000513989 PANK3Q9H999 370 aa13.94□□□□□ -0.18
NEDD9-214ENST00000513989 ADRA2BP18089 450 aa13.93□□□□□ -0.18
NEDD9-214ENST00000513989 DDX10Q13206 875 aaKnown RBP13.93□□□□□ -0.18
NEDD9-214ENST00000513989 QRICH2Q9H0J4 1663 aa13.93□□□□□ -0.18
NEDD9-214ENST00000513989 ACEP12821 1306 aa13.92□□□□□ -0.18
NEDD9-214ENST00000513989 PPIP5K1Q6PFW1 1433 aa13.92□□□□□ -0.18
NEDD9-214ENST00000513989 FAM83GA6ND36 823 aa13.92□□□□□ -0.18
NEDD9-214ENST00000513989 PLEKHG5O94827 1062 aa13.92□□□□□ -0.18
NEDD9-214ENST00000513989 VPS72Q15906 364 aa13.92□□□□□ -0.18
NEDD9-214ENST00000513989 KNSTRNQ9Y448 316 aa13.92□□□□□ -0.18
NEDD9-214ENST00000513989 ONECUT3O60422 494 aaPredicted RBP13.91□□□□□ -0.18
NEDD9-214ENST00000513989 THSD7AQ9UPZ6 1657 aa13.91□□□□□ -0.18
NEDD9-214ENST00000513989 LMOD2Q6P5Q4 547 aa13.9□□□□□ -0.18
NEDD9-214ENST00000513989 SEPT12Q8IYM1 358 aa13.89□□□□□ -0.19
NEDD9-214ENST00000513989 BLMP54132 1417 aaPredicted RBP13.89□□□□□ -0.19
NEDD9-214ENST00000513989 KTN1Q86UP2 1357 aaKnown RBP13.88□□□□□ -0.19
NEDD9-214ENST00000513989 ANKRD36BQ8N2N9 1353 aa13.88□□□□□ -0.19
NEDD9-214ENST00000513989 TNS1Q9HBL0 1735 aaKnown RBP13.88□□□□□ -0.19
NEDD9-214ENST00000513989 PAK3O75914 559 aaPredicted RBP13.88□□□□□ -0.19
NEDD9-214ENST00000513989 CCDC125Q86Z20 511 aa13.88□□□□□ -0.19
NEDD9-214ENST00000513989 BRD4O60885 1362 aaPredicted RBP13.87□□□□□ -0.19
NEDD9-214ENST00000513989 HAP1P54257 671 aaPredicted RBP13.87□□□□□ -0.19
NEDD9-214ENST00000513989 CGNL1Q0VF96 1302 aa13.87□□□□□ -0.19
NEDD9-214ENST00000513989 POLR3AO14802 1390 aaPredicted RBP13.86□□□□□ -0.19
NEDD9-214ENST00000513989 PIAS4Q8N2W9 510 aaPredicted RBP13.86□□□□□ -0.19
NEDD9-214ENST00000513989 NRKQ7Z2Y5 1582 aa13.86□□□□□ -0.19
NEDD9-214ENST00000513989 RGPD1P0DJD0 1748 aa13.86□□□□□ -0.19
NEDD9-214ENST00000513989 DEFB132Q7Z7B7 95 aa13.85□□□□□ -0.19
NEDD9-214ENST00000513989 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.85□□□□□ -0.19
NEDD9-214ENST00000513989 BTG4Q9NY30 223 aa13.85□□□□□ -0.19
NEDD9-214ENST00000513989 LMO7Q8WWI1 1683 aa13.85□□□□□ -0.19
NEDD9-214ENST00000513989 ABTB2Q8N961 1025 aa13.84□□□□□ -0.19
NEDD9-214ENST00000513989 CARD14Q9BXL6 1004 aa13.84□□□□□ -0.19
NEDD9-214ENST00000513989 TTC21BQ7Z4L5 1316 aa13.84□□□□□ -0.19
NEDD9-214ENST00000513989 TTC21AQ8NDW8 1320 aa13.84□□□□□ -0.19
NEDD9-214ENST00000513989 A0A1W2PP64 1363 aa13.83□□□□□ -0.19
NEDD9-214ENST00000513989 CPSF1Q10570 1443 aaKnown RBP13.83□□□□□ -0.2
NEDD9-214ENST00000513989 PER1O15534 1290 aaPredicted RBP13.83□□□□□ -0.2
NEDD9-214ENST00000513989 KRT27Q7Z3Y8 459 aa13.83□□□□□ -0.2
NEDD9-214ENST00000513989 FAM98CQ17RN3 349 aaKnown RBP13.82□□□□□ -0.2
NEDD9-214ENST00000513989 ZRANB1Q9UGI0 708 aa13.82□□□□□ -0.2
NEDD9-214ENST00000513989 CCDC9Q9Y3X0 531 aaKnown RBP13.82□□□□□ -0.2
NEDD9-214ENST00000513989 SPATA31A5Q5VU36 1347 aa13.82□□□□□ -0.2
NEDD9-214ENST00000513989 SPATA31A7Q8IWB4 1347 aa13.82□□□□□ -0.2
NEDD9-214ENST00000513989 EDC4Q6P2E9 1401 aaKnown RBP13.81□□□□□ -0.2
NEDD9-214ENST00000513989 NLRP13Q86W25 1043 aa13.81□□□□□ -0.2
NEDD9-214ENST00000513989 COG3Q96JB2 828 aa13.81□□□□□ -0.2
NEDD9-214ENST00000513989 LRP5O75197 1615 aa13.81□□□□□ -0.2
NEDD9-214ENST00000513989 KIAA0232Q92628 1395 aa13.81□□□□□ -0.2
NEDD9-214ENST00000513989 MSH5O43196 834 aa13.8□□□□□ -0.2
NEDD9-214ENST00000513989 NLRP6P59044 892 aa13.8□□□□□ -0.2
NEDD9-214ENST00000513989 USP6P35125 1406 aa13.8□□□□□ -0.2
NEDD9-214ENST00000513989 CAMTA1Q9Y6Y1 1673 aa13.79□□□□□ -0.2
NEDD9-214ENST00000513989 AKAP12Q02952 1782 aa13.79□□□□□ -0.2
NEDD9-214ENST00000513989 FYB1O15117 783 aa13.79□□□□□ -0.2
NEDD9-214ENST00000513989 ANP32CO43423 234 aa13.79□□□□□ -0.2
NEDD9-214ENST00000513989 NUTM2GQ5VZR2 741 aa13.79□□□□□ -0.2
NEDD9-214ENST00000513989 DIEXFQ68CQ4 756 aaKnown RBP13.79□□□□□ -0.2
NEDD9-214ENST00000513989 MORC1Q86VD1 984 aa13.79□□□□□ -0.2
NEDD9-214ENST00000513989 NSD3Q9BZ95 1437 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms