RNA–Protein interactions for RNA: ENST00000513632.2

PABPC4-218, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-218ENST00000513632 SPATA31A7Q8IWB4 1347 aa13.14□□□□□ -0.31
PABPC4-218ENST00000513632 MARF1Q9Y4F3 1742 aaKnown RBP13.14□□□□□ -0.31
PABPC4-218ENST00000513632 EVA1CP58658 441 aa13.14□□□□□ -0.31
PABPC4-218ENST00000513632 RTN4Q9NQC3 1192 aaKnown RBP13.14□□□□□ -0.31
PABPC4-218ENST00000513632 ADGRB2O60241 1585 aa13.14□□□□□ -0.31
PABPC4-218ENST00000513632 NBPF8Q3BBV2 869 aa13.13□□□□□ -0.31
PABPC4-218ENST00000513632 ZC3H6P61129 1189 aaKnown RBP13.12□□□□□ -0.31
PABPC4-218ENST00000513632 NUTM2GQ5VZR2 741 aa13.12□□□□□ -0.31
PABPC4-218ENST00000513632 STRN4Q9NRL3 753 aa13.12□□□□□ -0.31
PABPC4-218ENST00000513632 ACEP12821 1306 aa13.12□□□□□ -0.31
PABPC4-218ENST00000513632 PLEKHG3A1L390 1219 aa13.11□□□□□ -0.31
PABPC4-218ENST00000513632 SRPK2P78362 688 aaKnown RBP13.11□□□□□ -0.31
PABPC4-218ENST00000513632 CHRNA2Q15822 529 aa13.11□□□□□ -0.31
PABPC4-218ENST00000513632 ABTB2Q8N961 1025 aa13.11□□□□□ -0.31
PABPC4-218ENST00000513632 KIAA0232Q92628 1395 aa13.1□□□□□ -0.31
PABPC4-218ENST00000513632 NLRP13Q86W25 1043 aa13.1□□□□□ -0.31
PABPC4-218ENST00000513632 EN1Q05925 392 aaPredicted RBP13.09□□□□□ -0.31
PABPC4-218ENST00000513632 FAM196AQ6ZSG2 479 aa13.09□□□□□ -0.31
PABPC4-218ENST00000513632 NWD2Q9ULI1 1742 aa13.09□□□□□ -0.31
PABPC4-218ENST00000513632 SPATA31A1Q5TZJ5 1347 aa13.09□□□□□ -0.31
PABPC4-218ENST00000513632 RGPD8O14715 1765 aaPredicted RBP13.08□□□□□ -0.32
PABPC4-218ENST00000513632 PDE3BQ13370 1112 aa13.08□□□□□ -0.32
PABPC4-218ENST00000513632 NBPF1Q3BBV0 1214 aa13.08□□□□□ -0.32
PABPC4-218ENST00000513632 FAM182BQ5T319 152 aa13.08□□□□□ -0.32
PABPC4-218ENST00000513632 USP35Q9P2H5 1018 aa13.08□□□□□ -0.32
PABPC4-218ENST00000513632 ATP7BP35670 1465 aa13.08□□□□□ -0.32
PABPC4-218ENST00000513632 CENPJQ9HC77 1338 aaPredicted RBP13.08□□□□□ -0.32
PABPC4-218ENST00000513632 POLR3AO14802 1390 aaPredicted RBP13.07□□□□□ -0.32
PABPC4-218ENST00000513632 PSDA5PKW4 1024 aaPredicted RBP13.07□□□□□ -0.32
PABPC4-218ENST00000513632 EP400Q96L91 3159 aa13.07□□□□□ -0.32
PABPC4-218ENST00000513632 SRCAPQ6ZRS2 3230 aa13.07□□□□□ -0.32
PABPC4-218ENST00000513632 BARGINQ6ZT62 677 aa13.06□□□□□ -0.32
PABPC4-218ENST00000513632 COL14A1Q05707 1796 aaKnown RBP13.06□□□□□ -0.32
PABPC4-218ENST00000513632 PLCH1Q4KWH8 1693 aa13.05□□□□□ -0.32
PABPC4-218ENST00000513632 TRIM37O94972 964 aa13.05□□□□□ -0.32
PABPC4-218ENST00000513632 GCP02774 474 aa13.05□□□□□ -0.32
PABPC4-218ENST00000513632 TCP11L2Q8N4U5 519 aa13.05□□□□□ -0.32
PABPC4-218ENST00000513632 CABP2Q9NPB3 220 aa13.05□□□□□ -0.32
PABPC4-218ENST00000513632 THRAP3Q9Y2W1 955 aaKnown RBP13.05□□□□□ -0.32
PABPC4-218ENST00000513632 APBA3O96018 575 aa13.04□□□□□ -0.32
PABPC4-218ENST00000513632 TRPM3Q9HCF6 1732 aaPredicted RBP13.04□□□□□ -0.32
PABPC4-218ENST00000513632 BRD4O60885 1362 aaPredicted RBP13.04□□□□□ -0.32
PABPC4-218ENST00000513632 ALS2Q96Q42 1657 aa13.03□□□□□ -0.32
PABPC4-218ENST00000513632 ZBTB7CA1YPR0 619 aa13.03□□□□□ -0.32
PABPC4-218ENST00000513632 C11orf95C9JLR9 678 aaPredicted RBP13.03□□□□□ -0.32
PABPC4-218ENST00000513632 NLRP6P59044 892 aa13.03□□□□□ -0.32
PABPC4-218ENST00000513632 R3HDM1Q15032 1099 aaKnown RBP13.03□□□□□ -0.32
PABPC4-218ENST00000513632 EZH2Q15910 746 aaKnown RBP13.03□□□□□ -0.32
PABPC4-218ENST00000513632 LARP1Q6PKG0 1096 aaKnown RBP13.03□□□□□ -0.32
PABPC4-218ENST00000513632 CABP1Q9NZU7 370 aa13.03□□□□□ -0.32
PABPC4-218ENST00000513632 AMER1Q5JTC6 1135 aaPredicted RBP13.02□□□□□ -0.33
PABPC4-218ENST00000513632 EVC2Q86UK5 1308 aa13.02□□□□□ -0.33
PABPC4-218ENST00000513632 CPDO75976 1380 aa13.02□□□□□ -0.33
PABPC4-218ENST00000513632 PPIP5K1Q6PFW1 1433 aa13.02□□□□□ -0.33
PABPC4-218ENST00000513632 ABCA3Q99758 1704 aa13.02□□□□□ -0.33
PABPC4-218ENST00000513632 NCBP3Q53F19 620 aaKnown RBP13.01□□□□□ -0.33
PABPC4-218ENST00000513632 NBPF14Q5TI25 921 aa13.01□□□□□ -0.33
PABPC4-218ENST00000513632 L3MBTL2Q969R5 705 aa13.01□□□□□ -0.33
PABPC4-218ENST00000513632 CAMKK2Q96RR4 588 aa13.01□□□□□ -0.33
PABPC4-218ENST00000513632 ZNF692Q9BU19 519 aaPredicted RBP13.01□□□□□ -0.33
PABPC4-218ENST00000513632 DAXXQ9UER7 740 aaPredicted RBP13.01□□□□□ -0.33
PABPC4-218ENST00000513632 USP19O94966 1318 aa13.01□□□□□ -0.33
PABPC4-218ENST00000513632 SSH2Q76I76 1423 aa13.01□□□□□ -0.33
PABPC4-218ENST00000513632 BRWD3Q6RI45 1802 aa13□□□□□ -0.33
PABPC4-218ENST00000513632 DISP2A7MBM2 1401 aa13□□□□□ -0.33
PABPC4-218ENST00000513632 NRAPQ86VF7 1730 aa12.99□□□□□ -0.33
PABPC4-218ENST00000513632 PARD3Q8TEW0 1356 aa12.99□□□□□ -0.33
PABPC4-218ENST00000513632 NEUROD1Q13562 356 aa12.98□□□□□ -0.33
PABPC4-218ENST00000513632 TOM1L2Q6ZVM7 507 aa12.98□□□□□ -0.33
PABPC4-218ENST00000513632 ARHGEF28Q8N1W1 1705 aaKnown RBP12.98□□□□□ -0.33
PABPC4-218ENST00000513632 ITSN1Q15811 1721 aa12.97□□□□□ -0.33
PABPC4-218ENST00000513632 KCNH5Q8NCM2 988 aa12.97□□□□□ -0.33
PABPC4-218ENST00000513632 DDB1Q16531 1140 aa12.96□□□□□ -0.33
PABPC4-218ENST00000513632 USP6P35125 1406 aa12.96□□□□□ -0.34
PABPC4-218ENST00000513632 ROCK2O75116 1388 aaKnown RBP12.95□□□□□ -0.34
PABPC4-218ENST00000513632 AATKQ6ZMQ8 1374 aa12.95□□□□□ -0.34
PABPC4-218ENST00000513632 CSB-PGBD3P0DP91 1061 aa12.95□□□□□ -0.34
PABPC4-218ENST00000513632 SIN3AQ96ST3 1273 aa12.95□□□□□ -0.34
PABPC4-218ENST00000513632 CDCA7Q9BWT1 371 aaPredicted RBP12.95□□□□□ -0.34
PABPC4-218ENST00000513632 KIAA1210Q9ULL0 1709 aa12.95□□□□□ -0.34
PABPC4-218ENST00000513632 THSD7AQ9UPZ6 1657 aa12.95□□□□□ -0.34
PABPC4-218ENST00000513632 CAMTA1Q9Y6Y1 1673 aa12.95□□□□□ -0.34
PABPC4-218ENST00000513632 CRB1P82279 1406 aa12.95□□□□□ -0.34
PABPC4-218ENST00000513632 TTC21BQ7Z4L5 1316 aa12.93□□□□□ -0.34
PABPC4-218ENST00000513632 TTC21AQ8NDW8 1320 aa12.93□□□□□ -0.34
PABPC4-218ENST00000513632 COL5A2P05997 1499 aaPredicted RBP12.92□□□□□ -0.34
PABPC4-218ENST00000513632 SOX12O15370 315 aa12.92□□□□□ -0.34
PABPC4-218ENST00000513632 RGPD1P0DJD0 1748 aa12.92□□□□□ -0.34
PABPC4-218ENST00000513632 PPP1R1BQ9UD71 204 aaPredicted RBP12.92□□□□□ -0.34
PABPC4-218ENST00000513632 PHRF1Q9P1Y6 1649 aaKnown RBP12.91□□□□□ -0.34
PABPC4-218ENST00000513632 WDR17Q8IZU2 1322 aa12.91□□□□□ -0.34
PABPC4-218ENST00000513632 CRYBG1Q9Y4K1 1723 aa12.91□□□□□ -0.34
PABPC4-218ENST00000513632 DCAF8L1A6NGE4 600 aa12.91□□□□□ -0.34
PABPC4-218ENST00000513632 PLSCR1O15162 318 aa12.91□□□□□ -0.34
PABPC4-218ENST00000513632 ARHGEF25Q86VW2 580 aa12.91□□□□□ -0.34
PABPC4-218ENST00000513632 NRKQ7Z2Y5 1582 aa12.9□□□□□ -0.34
PABPC4-218ENST00000513632 TOPAZ1Q8N9V7 1692 aa12.9□□□□□ -0.34
PABPC4-218ENST00000513632 OVOS2A0A0G2JMS6 1433 aa12.9□□□□□ -0.34
PABPC4-218ENST00000513632 OVOS2A0A0J9YW53 1432 aa12.9□□□□□ -0.34
PABPC4-218ENST00000513632 OVOS2Q6IE36 1432 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms