RNA–Protein interactions for RNA: ENST00000512725.5

DDR1-269, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-269ENST00000512725 TRAK1Q9UPV9 953 aa23.66■■□□□ 1.38
DDR1-269ENST00000512725 SPATA31A5Q5VU36 1347 aa23.65■■□□□ 1.38
DDR1-269ENST00000512725 SPATA31A7Q8IWB4 1347 aa23.65■■□□□ 1.38
DDR1-269ENST00000512725 TRPM3Q9HCF6 1732 aaPredicted RBP23.64■■□□□ 1.37
DDR1-269ENST00000512725 TRIM37O94972 964 aa23.63■■□□□ 1.37
DDR1-269ENST00000512725 ACIN1Q9UKV3 1341 aaKnown RBP23.62■■□□□ 1.37
DDR1-269ENST00000512725 STRN4Q9NRL3 753 aa23.62■■□□□ 1.37
DDR1-269ENST00000512725 ALS2Q96Q42 1657 aa23.6■■□□□ 1.37
DDR1-269ENST00000512725 APBA3O96018 575 aa23.59■■□□□ 1.37
DDR1-269ENST00000512725 CHRNA2Q15822 529 aa23.59■■□□□ 1.37
DDR1-269ENST00000512725 USP35Q9P2H5 1018 aa23.59■■□□□ 1.37
DDR1-269ENST00000512725 EIF3AQ14152 1382 aaKnown RBP23.59■■□□□ 1.37
DDR1-269ENST00000512725 ADGRB2O60241 1585 aa23.59■■□□□ 1.37
DDR1-269ENST00000512725 DLC1Q96QB1 1528 aa23.59■■□□□ 1.37
DDR1-269ENST00000512725 PRR36Q9H6K5 1346 aa23.59■■□□□ 1.37
DDR1-269ENST00000512725 TNS1Q9HBL0 1735 aaKnown RBP23.58■■□□□ 1.37
DDR1-269ENST00000512725 FAM196AQ6ZSG2 479 aa23.57■■□□□ 1.36
DDR1-269ENST00000512725 KDM2AQ9Y2K7 1162 aa23.57■■□□□ 1.36
DDR1-269ENST00000512725 WASLO00401 505 aaPredicted RBP23.56■■□□□ 1.36
DDR1-269ENST00000512725 NUTM2GQ5VZR2 741 aa23.56■■□□□ 1.36
DDR1-269ENST00000512725 THSD7AQ9UPZ6 1657 aa23.56■■□□□ 1.36
DDR1-269ENST00000512725 ZC3H6P61129 1189 aaKnown RBP23.55■■□□□ 1.36
DDR1-269ENST00000512725 CAMKK2Q96RR4 588 aa23.55■■□□□ 1.36
DDR1-269ENST00000512725 DISP2A7MBM2 1401 aa23.55■■□□□ 1.36
DDR1-269ENST00000512725 SPATA31A1Q5TZJ5 1347 aa23.55■■□□□ 1.36
DDR1-269ENST00000512725 TULP4Q9NRJ4 1543 aa23.54■■□□□ 1.36
DDR1-269ENST00000512725 KIAA0232Q92628 1395 aa23.54■■□□□ 1.36
DDR1-269ENST00000512725 EVA1CP58658 441 aa23.54■■□□□ 1.36
DDR1-269ENST00000512725 PDE3BQ13370 1112 aa23.53■■□□□ 1.36
DDR1-269ENST00000512725 YY1P25490 414 aa23.51■■□□□ 1.35
DDR1-269ENST00000512725 CRYBG1Q9Y4K1 1723 aa23.5■■□□□ 1.35
DDR1-269ENST00000512725 NBPF8Q3BBV2 869 aa23.5■■□□□ 1.35
DDR1-269ENST00000512725 NBPF14Q5TI25 921 aa23.5■■□□□ 1.35
DDR1-269ENST00000512725 ADGRB1O14514 1584 aa23.49■■□□□ 1.35
DDR1-269ENST00000512725 PPP1R1BQ9UD71 204 aaPredicted RBP23.49■■□□□ 1.35
DDR1-269ENST00000512725 DCAF11Q8TEB1 546 aa23.48■■□□□ 1.35
DDR1-269ENST00000512725 NUDT16Q96DE0 195 aaKnown RBP23.48■■□□□ 1.35
DDR1-269ENST00000512725 PARD3Q8TEW0 1356 aa23.45■■□□□ 1.34
DDR1-269ENST00000512725 ITSN1Q15811 1721 aa23.45■■□□□ 1.34
DDR1-269ENST00000512725 PHRF1Q9P1Y6 1649 aaKnown RBP23.44■■□□□ 1.34
DDR1-269ENST00000512725 DCAF8L1A6NGE4 600 aa23.44■■□□□ 1.34
DDR1-269ENST00000512725 LARP1Q6PKG0 1096 aaKnown RBP23.42■■□□□ 1.34
DDR1-269ENST00000512725 SSH2Q76I76 1423 aa23.42■■□□□ 1.34
DDR1-269ENST00000512725 ZBTB7CA1YPR0 619 aa23.41■■□□□ 1.34
DDR1-269ENST00000512725 BARGINQ6ZT62 677 aa23.41■■□□□ 1.34
DDR1-269ENST00000512725 TCP11L2Q8N4U5 519 aa23.41■■□□□ 1.34
DDR1-269ENST00000512725 ABTB2Q8N961 1025 aa23.4■■□□□ 1.34
DDR1-269ENST00000512725 CDK19Q9BWU1 502 aa23.4■■□□□ 1.34
DDR1-269ENST00000512725 SPON1Q9HCB6 807 aa23.4■■□□□ 1.34
DDR1-269ENST00000512725 ATP7BP35670 1465 aa23.4■■□□□ 1.34
DDR1-269ENST00000512725 RREB1Q92766 1687 aa23.4■■□□□ 1.34
DDR1-269ENST00000512725 NUP188Q5SRE5 1749 aa23.39■■□□□ 1.34
DDR1-269ENST00000512725 ACEP12821 1306 aa23.39■■□□□ 1.34
DDR1-269ENST00000512725 KCNQ2O43526 872 aa23.37■■□□□ 1.33
DDR1-269ENST00000512725 ARHGEF28Q8N1W1 1705 aaKnown RBP23.36■■□□□ 1.33
DDR1-269ENST00000512725 CAMTA1Q9Y6Y1 1673 aa23.35■■□□□ 1.33
DDR1-269ENST00000512725 RAB3GAP2Q9H2M9 1393 aa23.34■■□□□ 1.33
DDR1-269ENST00000512725 CCDC61Q9Y6R9 512 aa23.33■■□□□ 1.33
DDR1-269ENST00000512725 NRKQ7Z2Y5 1582 aa23.32■■□□□ 1.32
DDR1-269ENST00000512725 THRAP3Q9Y2W1 955 aaKnown RBP23.32■■□□□ 1.32
DDR1-269ENST00000512725 POLR3AO14802 1390 aaPredicted RBP23.3■■□□□ 1.32
DDR1-269ENST00000512725 NLRP13Q86W25 1043 aa23.3■■□□□ 1.32
DDR1-269ENST00000512725 GCP02774 474 aa23.29■■□□□ 1.32
DDR1-269ENST00000512725 STAC3Q96MF2 364 aa23.29■■□□□ 1.32
DDR1-269ENST00000512725 SRPK2P78362 688 aaKnown RBP23.28■■□□□ 1.32
DDR1-269ENST00000512725 CPDO75976 1380 aa23.27■■□□□ 1.32
DDR1-269ENST00000512725 PLEKHG3A1L390 1219 aa23.27■■□□□ 1.32
DDR1-269ENST00000512725 NINLQ9Y2I6 1382 aa23.27■■□□□ 1.31
DDR1-269ENST00000512725 TOPAZ1Q8N9V7 1692 aa23.26■■□□□ 1.31
DDR1-269ENST00000512725 LMO7Q8WWI1 1683 aa23.26■■□□□ 1.31
DDR1-269ENST00000512725 C11orf95C9JLR9 678 aaPredicted RBP23.26■■□□□ 1.31
DDR1-269ENST00000512725 USP19O94966 1318 aa23.26■■□□□ 1.31
DDR1-269ENST00000512725 OVOS2A0A0G2JMS6 1433 aa23.25■■□□□ 1.31
DDR1-269ENST00000512725 OVOS2A0A0J9YW53 1432 aa23.25■■□□□ 1.31
DDR1-269ENST00000512725 OVOS2Q6IE36 1432 aa23.25■■□□□ 1.31
DDR1-269ENST00000512725 BCL11BQ9C0K0 894 aaPredicted RBP23.25■■□□□ 1.31
DDR1-269ENST00000512725 PARP4Q9UKK3 1724 aaKnown RBP23.25■■□□□ 1.31
DDR1-269ENST00000512725 COL5A2P05997 1499 aaPredicted RBP23.24■■□□□ 1.31
DDR1-269ENST00000512725 DDB1Q16531 1140 aa23.24■■□□□ 1.31
DDR1-269ENST00000512725 TOM1L2Q6ZVM7 507 aa23.24■■□□□ 1.31
DDR1-269ENST00000512725 CRB1P82279 1406 aa23.24■■□□□ 1.31
DDR1-269ENST00000512725 ANO8Q9HCE9 1232 aaPredicted RBP23.23■■□□□ 1.31
DDR1-269ENST00000512725 ZBTB7AO95365 584 aa23.22■■□□□ 1.31
DDR1-269ENST00000512725 NLRP6P59044 892 aa23.22■■□□□ 1.31
DDR1-269ENST00000512725 PPIP5K1Q6PFW1 1433 aa23.22■■□□□ 1.31
DDR1-269ENST00000512725 CABP2Q9NPB3 220 aa23.21■■□□□ 1.31
DDR1-269ENST00000512725 PLSCR1O15162 318 aa23.2■■□□□ 1.3
DDR1-269ENST00000512725 PTF1AQ7RTS3 328 aa23.19■■□□□ 1.3
DDR1-269ENST00000512725 PDGFDQ9GZP0 370 aaPredicted RBP23.19■■□□□ 1.3
DDR1-269ENST00000512725 ATF5Q9Y2D1 282 aaPredicted RBP23.19■■□□□ 1.3
DDR1-269ENST00000512725 SBF2Q86WG5 1849 aa23.18■■□□□ 1.3
DDR1-269ENST00000512725 LRRC37A3O60309 1634 aa23.16■■□□□ 1.3
DDR1-269ENST00000512725 NBPF1Q3BBV0 1214 aa23.16■■□□□ 1.3
DDR1-269ENST00000512725 PEAK1Q9H792 1746 aa23.16■■□□□ 1.3
DDR1-269ENST00000512725 SOX12O15370 315 aa23.15■■□□□ 1.3
DDR1-269ENST00000512725 CABP1Q9NZU7 370 aa23.15■■□□□ 1.3
DDR1-269ENST00000512725 AATKQ6ZMQ8 1374 aa23.14■■□□□ 1.3
DDR1-269ENST00000512725 CENPJQ9HC77 1338 aaPredicted RBP23.14■■□□□ 1.3
DDR1-269ENST00000512725 CSB-PGBD3P0DP91 1061 aa23.14■■□□□ 1.29
DDR1-269ENST00000512725 STK32BQ9NY57 414 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms