RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 NRAPQ86VF7 1730 aa18.7■□□□□ 0.58
DDX41-215ENST00000512431 PRDM11Q9NQV5 511 aa18.7■□□□□ 0.58
DDX41-215ENST00000512431 DCAF8L1A6NGE4 600 aa18.69■□□□□ 0.58
DDX41-215ENST00000512431 PAK3O75914 559 aaPredicted RBP18.69■□□□□ 0.58
DDX41-215ENST00000512431 APBA3O96018 575 aa18.69■□□□□ 0.58
DDX41-215ENST00000512431 CAMKK2Q96RR4 588 aa18.69■□□□□ 0.58
DDX41-215ENST00000512431 EIF3AQ14152 1382 aaKnown RBP18.68■□□□□ 0.58
DDX41-215ENST00000512431 PARD3Q8TEW0 1356 aa18.68■□□□□ 0.58
DDX41-215ENST00000512431 NBPF8Q3BBV2 869 aa18.67■□□□□ 0.58
DDX41-215ENST00000512431 NBPF14Q5TI25 921 aa18.67■□□□□ 0.58
DDX41-215ENST00000512431 NGDNQ8NEJ9 315 aaKnown RBP18.67■□□□□ 0.58
DDX41-215ENST00000512431 ACIN1Q9UKV3 1341 aaKnown RBP18.67■□□□□ 0.58
DDX41-215ENST00000512431 ADGRB2O60241 1585 aa18.67■□□□□ 0.58
DDX41-215ENST00000512431 HIRIP3Q9BW71 556 aaPredicted RBP18.65■□□□□ 0.58
DDX41-215ENST00000512431 STRN4Q9NRL3 753 aa18.65■□□□□ 0.58
DDX41-215ENST00000512431 SPATA31A1Q5TZJ5 1347 aa18.65■□□□□ 0.58
DDX41-215ENST00000512431 PDE3BQ13370 1112 aa18.64■□□□□ 0.57
DDX41-215ENST00000512431 PPP1R1BQ9UD71 204 aaPredicted RBP18.64■□□□□ 0.57
DDX41-215ENST00000512431 TRAK1Q9UPV9 953 aa18.63■□□□□ 0.57
DDX41-215ENST00000512431 DLC1Q96QB1 1528 aa18.63■□□□□ 0.57
DDX41-215ENST00000512431 THSD7AQ9UPZ6 1657 aa18.63■□□□□ 0.57
DDX41-215ENST00000512431 TNS1Q9HBL0 1735 aaKnown RBP18.63■□□□□ 0.57
DDX41-215ENST00000512431 TRPM3Q9HCF6 1732 aaPredicted RBP18.63■□□□□ 0.57
DDX41-215ENST00000512431 EVA1CP58658 441 aa18.62■□□□□ 0.57
DDX41-215ENST00000512431 MINK1Q8N4C8 1332 aaPredicted RBP18.62■□□□□ 0.57
DDX41-215ENST00000512431 ALS2Q96Q42 1657 aa18.61■□□□□ 0.57
DDX41-215ENST00000512431 USP35Q9P2H5 1018 aa18.61■□□□□ 0.57
DDX41-215ENST00000512431 KIAA0232Q92628 1395 aa18.6■□□□□ 0.57
DDX41-215ENST00000512431 WASLO00401 505 aaPredicted RBP18.6■□□□□ 0.57
DDX41-215ENST00000512431 CHRNA2Q15822 529 aa18.6■□□□□ 0.57
DDX41-215ENST00000512431 SPON1Q9HCB6 807 aa18.6■□□□□ 0.57
DDX41-215ENST00000512431 PRR36Q9H6K5 1346 aa18.59■□□□□ 0.57
DDX41-215ENST00000512431 ZC3H6P61129 1189 aaKnown RBP18.58■□□□□ 0.56
DDX41-215ENST00000512431 BARGINQ6ZT62 677 aa18.58■□□□□ 0.56
DDX41-215ENST00000512431 TULP4Q9NRJ4 1543 aa18.58■□□□□ 0.56
DDX41-215ENST00000512431 KCNQ2O43526 872 aa18.56■□□□□ 0.56
DDX41-215ENST00000512431 C11orf95C9JLR9 678 aaPredicted RBP18.53■□□□□ 0.56
DDX41-215ENST00000512431 TCP11L2Q8N4U5 519 aa18.53■□□□□ 0.56
DDX41-215ENST00000512431 CRYBG1Q9Y4K1 1723 aa18.52■□□□□ 0.56
DDX41-215ENST00000512431 NUTM2GQ5VZR2 741 aa18.52■□□□□ 0.56
DDX41-215ENST00000512431 NUDT16Q96DE0 195 aaKnown RBP18.52■□□□□ 0.56
DDX41-215ENST00000512431 THRAP3Q9Y2W1 955 aaKnown RBP18.52■□□□□ 0.56
DDX41-215ENST00000512431 NINLQ9Y2I6 1382 aa18.52■□□□□ 0.55
DDX41-215ENST00000512431 SSH2Q76I76 1423 aa18.51■□□□□ 0.55
DDX41-215ENST00000512431 ATP7BP35670 1465 aa18.51■□□□□ 0.55
DDX41-215ENST00000512431 LARP1Q6PKG0 1096 aaKnown RBP18.5■□□□□ 0.55
DDX41-215ENST00000512431 KDM2AQ9Y2K7 1162 aa18.5■□□□□ 0.55
DDX41-215ENST00000512431 ADGRB1O14514 1584 aa18.5■□□□□ 0.55
DDX41-215ENST00000512431 RREB1Q92766 1687 aa18.5■□□□□ 0.55
DDX41-215ENST00000512431 NUP188Q5SRE5 1749 aa18.49■□□□□ 0.55
DDX41-215ENST00000512431 ABTB2Q8N961 1025 aa18.48■□□□□ 0.55
DDX41-215ENST00000512431 DCAF11Q8TEB1 546 aa18.47■□□□□ 0.55
DDX41-215ENST00000512431 PHRF1Q9P1Y6 1649 aaKnown RBP18.47■□□□□ 0.55
DDX41-215ENST00000512431 STAC3Q96MF2 364 aa18.46■□□□□ 0.55
DDX41-215ENST00000512431 CDK19Q9BWU1 502 aa18.45■□□□□ 0.54
DDX41-215ENST00000512431 ITSN1Q15811 1721 aa18.45■□□□□ 0.54
DDX41-215ENST00000512431 ACEP12821 1306 aa18.45■□□□□ 0.54
DDX41-215ENST00000512431 PLSCR1O15162 318 aa18.44■□□□□ 0.54
DDX41-215ENST00000512431 NLRP13Q86W25 1043 aa18.44■□□□□ 0.54
DDX41-215ENST00000512431 CCDC61Q9Y6R9 512 aa18.44■□□□□ 0.54
DDX41-215ENST00000512431 CAMTA1Q9Y6Y1 1673 aa18.44■□□□□ 0.54
DDX41-215ENST00000512431 CPDO75976 1380 aa18.43■□□□□ 0.54
DDX41-215ENST00000512431 POLR3AO14802 1390 aaPredicted RBP18.42■□□□□ 0.54
DDX41-215ENST00000512431 OVOS2A0A0G2JMS6 1433 aa18.41■□□□□ 0.54
DDX41-215ENST00000512431 OVOS2A0A0J9YW53 1432 aa18.41■□□□□ 0.54
DDX41-215ENST00000512431 OVOS2Q6IE36 1432 aa18.41■□□□□ 0.54
DDX41-215ENST00000512431 BCL11BQ9C0K0 894 aaPredicted RBP18.41■□□□□ 0.54
DDX41-215ENST00000512431 PLEKHG3A1L390 1219 aa18.4■□□□□ 0.54
DDX41-215ENST00000512431 GCP02774 474 aa18.4■□□□□ 0.54
DDX41-215ENST00000512431 DDB1Q16531 1140 aa18.4■□□□□ 0.54
DDX41-215ENST00000512431 ZBTB7CA1YPR0 619 aa18.39■□□□□ 0.53
DDX41-215ENST00000512431 NRKQ7Z2Y5 1582 aa18.38■□□□□ 0.53
DDX41-215ENST00000512431 USP19O94966 1318 aa18.38■□□□□ 0.53
DDX41-215ENST00000512431 CRB1P82279 1406 aa18.38■□□□□ 0.53
DDX41-215ENST00000512431 ZBTB7AO95365 584 aa18.37■□□□□ 0.53
DDX41-215ENST00000512431 ZNF784Q8NCA9 323 aaPredicted RBP18.37■□□□□ 0.53
DDX41-215ENST00000512431 COL5A2P05997 1499 aaPredicted RBP18.37■□□□□ 0.53
DDX41-215ENST00000512431 LMO7Q8WWI1 1683 aa18.37■□□□□ 0.53
DDX41-215ENST00000512431 PARP4Q9UKK3 1724 aaKnown RBP18.37■□□□□ 0.53
DDX41-215ENST00000512431 TOM1L2Q6ZVM7 507 aa18.36■□□□□ 0.53
DDX41-215ENST00000512431 ANO8Q9HCE9 1232 aaPredicted RBP18.36■□□□□ 0.53
DDX41-215ENST00000512431 STK32BQ9NY57 414 aa18.35■□□□□ 0.53
DDX41-215ENST00000512431 ATF5Q9Y2D1 282 aaPredicted RBP18.35■□□□□ 0.53
DDX41-215ENST00000512431 ARHGEF28Q8N1W1 1705 aaKnown RBP18.34■□□□□ 0.53
DDX41-215ENST00000512431 RGPD3A6NKT7 1758 aaPredicted RBP18.33■□□□□ 0.53
DDX41-215ENST00000512431 RGPD4Q7Z3J3 1758 aa18.33■□□□□ 0.53
DDX41-215ENST00000512431 SENP3-EIF4A1A0A087X0R7 540 aa18.33■□□□□ 0.52
DDX41-215ENST00000512431 SRPK2P78362 688 aaKnown RBP18.33■□□□□ 0.52
DDX41-215ENST00000512431 CDCA7Q9BWT1 371 aaPredicted RBP18.33■□□□□ 0.52
DDX41-215ENST00000512431 PDGFDQ9GZP0 370 aaPredicted RBP18.33■□□□□ 0.52
DDX41-215ENST00000512431 NLRP6P59044 892 aa18.32■□□□□ 0.52
DDX41-215ENST00000512431 BRD4O60885 1362 aaPredicted RBP18.31■□□□□ 0.52
DDX41-215ENST00000512431 AATKQ6ZMQ8 1374 aa18.31■□□□□ 0.52
DDX41-215ENST00000512431 PTGER2P43116 358 aa18.31■□□□□ 0.52
DDX41-215ENST00000512431 SYT17Q9BSW7 474 aa18.31■□□□□ 0.52
DDX41-215ENST00000512431 FHDC1Q9C0D6 1143 aaPredicted RBP18.31■□□□□ 0.52
DDX41-215ENST00000512431 TOPAZ1Q8N9V7 1692 aa18.31■□□□□ 0.52
DDX41-215ENST00000512431 PTF1AQ7RTS3 328 aa18.3■□□□□ 0.52
DDX41-215ENST00000512431 PROM2Q8N271 834 aa18.3■□□□□ 0.52
DDX41-215ENST00000512431 PPIP5K1Q6PFW1 1433 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms