RNA–Protein interactions for RNA: ENST00000512372.5

NR1I3-232, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-232ENST00000512372 C19orf44Q9H6X5 657 aa12.21□□□□□ -0.45
NR1I3-232ENST00000512372 KIF1AQ12756 1690 aa12.21□□□□□ -0.45
NR1I3-232ENST00000512372 AATKQ6ZMQ8 1374 aa12.2□□□□□ -0.46
NR1I3-232ENST00000512372 USP54Q70EL1 1684 aa12.2□□□□□ -0.46
NR1I3-232ENST00000512372 FYB1O15117 783 aa12.2□□□□□ -0.46
NR1I3-232ENST00000512372 HSPA2P54652 639 aa12.2□□□□□ -0.46
NR1I3-232ENST00000512372 PROSER2Q86WR7 435 aaPredicted RBP12.2□□□□□ -0.46
NR1I3-232ENST00000512372 SMG6Q86US8 1419 aaKnown RBP12.2□□□□□ -0.46
NR1I3-232ENST00000512372 ACEP12821 1306 aa12.19□□□□□ -0.46
NR1I3-232ENST00000512372 TMEM94Q12767 1356 aa12.18□□□□□ -0.46
NR1I3-232ENST00000512372 USP31Q70CQ4 1352 aa12.18□□□□□ -0.46
NR1I3-232ENST00000512372 CCDC184Q52MB2 194 aa12.18□□□□□ -0.46
NR1I3-232ENST00000512372 OVOS2A0A0J9YW53 1432 aa12.18□□□□□ -0.46
NR1I3-232ENST00000512372 OVOS2Q6IE36 1432 aa12.18□□□□□ -0.46
NR1I3-232ENST00000512372 STRCP1A6NGW2 1772 aa12.18□□□□□ -0.46
NR1I3-232ENST00000512372 TTC21BQ7Z4L5 1316 aa12.17□□□□□ -0.46
NR1I3-232ENST00000512372 NGEFQ8N5V2 710 aa12.17□□□□□ -0.46
NR1I3-232ENST00000512372 CFAP53Q96M91 514 aa12.17□□□□□ -0.46
NR1I3-232ENST00000512372 BLMP54132 1417 aaPredicted RBP12.17□□□□□ -0.46
NR1I3-232ENST00000512372 MST1RQ04912 1400 aa12.17□□□□□ -0.46
NR1I3-232ENST00000512372 MSH6P52701 1360 aa12.17□□□□□ -0.46
NR1I3-232ENST00000512372 ZBED9Q6R2W3 1325 aa12.16□□□□□ -0.46
NR1I3-232ENST00000512372 C1orf167Q5SNV9 1468 aa12.16□□□□□ -0.46
NR1I3-232ENST00000512372 CADPS2Q86UW7 1296 aa12.16□□□□□ -0.46
NR1I3-232ENST00000512372 PNPLA6Q8IY17 1366 aa12.16□□□□□ -0.46
NR1I3-232ENST00000512372 PHF8Q9UPP1 1060 aa12.15□□□□□ -0.46
NR1I3-232ENST00000512372 KIF24Q5T7B8 1368 aa12.15□□□□□ -0.46
NR1I3-232ENST00000512372 CDK12Q9NYV4 1490 aaPredicted RBP12.14□□□□□ -0.47
NR1I3-232ENST00000512372 WDR43Q15061 677 aaKnown RBP eCLIP12.14□□□□□ -0.47
NR1I3-232ENST00000512372 C14orf37Q86TY3 774 aa12.14□□□□□ -0.47
NR1I3-232ENST00000512372 FAM9BQ8IZU0 186 aa12.14□□□□□ -0.47
NR1I3-232ENST00000512372 NGDNQ8NEJ9 315 aaKnown RBP12.14□□□□□ -0.47
NR1I3-232ENST00000512372 COG3Q96JB2 828 aa12.14□□□□□ -0.47
NR1I3-232ENST00000512372 YTHDC1Q96MU7 727 aaKnown RBP12.14□□□□□ -0.47
NR1I3-232ENST00000512372 U3KPZ7 1027 aaPredicted RBP12.14□□□□□ -0.47
NR1I3-232ENST00000512372 ATF3P18847 181 aa12.13□□□□□ -0.47
NR1I3-232ENST00000512372 GGNBP2Q9H3C7 697 aa12.13□□□□□ -0.47
NR1I3-232ENST00000512372 HNRNPUQ00839 825 aaKnown RBP eCLIP12.12□□□□□ -0.47
NR1I3-232ENST00000512372 POTEDQ86YR6 584 aa12.12□□□□□ -0.47
NR1I3-232ENST00000512372 COL3A1P02461 1466 aaPredicted RBP12.12□□□□□ -0.47
NR1I3-232ENST00000512372 RGPD8O14715 1765 aaPredicted RBP12.12□□□□□ -0.47
NR1I3-232ENST00000512372 PIK3C2AO00443 1686 aa12.11□□□□□ -0.47
NR1I3-232ENST00000512372 SHPRHQ149N8 1683 aa12.11□□□□□ -0.47
NR1I3-232ENST00000512372 CNGB1Q14028 1251 aaPredicted RBP12.11□□□□□ -0.47
NR1I3-232ENST00000512372 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.11□□□□□ -0.47
NR1I3-232ENST00000512372 XIRP1Q702N8 1843 aaKnown RBP12.1□□□□□ -0.47
NR1I3-232ENST00000512372 MTHFSP49914 203 aa12.1□□□□□ -0.47
NR1I3-232ENST00000512372 NME9Q86XW9 330 aa12.1□□□□□ -0.47
NR1I3-232ENST00000512372 NUDCQ9Y266 331 aa12.1□□□□□ -0.47
NR1I3-232ENST00000512372 SBNO1A3KN83 1393 aa12.09□□□□□ -0.47
NR1I3-232ENST00000512372 ESCO1Q5FWF5 840 aa12.09□□□□□ -0.47
NR1I3-232ENST00000512372 PMFBP1Q8TBY8 1022 aa12.09□□□□□ -0.47
NR1I3-232ENST00000512372 ZNF335Q9H4Z2 1342 aaPredicted RBP12.09□□□□□ -0.47
NR1I3-232ENST00000512372 RTL1A6NKG5 1358 aa12.08□□□□□ -0.48
NR1I3-232ENST00000512372 NUTM2FA1L443 756 aa12.08□□□□□ -0.48
NR1I3-232ENST00000512372 POLKQ9UBT6 870 aa12.08□□□□□ -0.48
NR1I3-232ENST00000512372 TRPM3Q9HCF6 1732 aaPredicted RBP12.08□□□□□ -0.48
NR1I3-232ENST00000512372 NPHP3Q7Z494 1330 aa12.08□□□□□ -0.48
NR1I3-232ENST00000512372 PHRF1Q9P1Y6 1649 aaKnown RBP12.08□□□□□ -0.48
NR1I3-232ENST00000512372 PDE3BQ13370 1112 aa12.07□□□□□ -0.48
NR1I3-232ENST00000512372 PNNQ9H307 717 aaKnown RBP12.07□□□□□ -0.48
NR1I3-232ENST00000512372 SLIT3O75094 1523 aa12.06□□□□□ -0.48
NR1I3-232ENST00000512372 PSME1Q06323 249 aa12.06□□□□□ -0.48
NR1I3-232ENST00000512372 ADAMTS8Q9UP79 889 aa12.06□□□□□ -0.48
NR1I3-232ENST00000512372 MED1Q15648 1581 aaPredicted RBP12.05□□□□□ -0.48
NR1I3-232ENST00000512372 LTBP4Q8N2S1 1624 aa12.05□□□□□ -0.48
NR1I3-232ENST00000512372 KCNH5Q8NCM2 988 aa12.05□□□□□ -0.48
NR1I3-232ENST00000512372 MARF1Q9Y4F3 1742 aaKnown RBP12.05□□□□□ -0.48
NR1I3-232ENST00000512372 ABCC6O95255 1503 aa12.05□□□□□ -0.48
NR1I3-232ENST00000512372 USP19O94966 1318 aa12.05□□□□□ -0.48
NR1I3-232ENST00000512372 FLT4P35916 1363 aa12.05□□□□□ -0.48
NR1I3-232ENST00000512372 ALS2Q96Q42 1657 aa12.04□□□□□ -0.48
NR1I3-232ENST00000512372 DIAPH1O60610 1272 aaKnown RBP12.04□□□□□ -0.48
NR1I3-232ENST00000512372 TNNT2P45379 298 aaPredicted RBP12.04□□□□□ -0.48
NR1I3-232ENST00000512372 ARHGEF10O15013 1369 aa12.04□□□□□ -0.48
NR1I3-232ENST00000512372 IQSEC2Q5JU85 1478 aa12.03□□□□□ -0.48
NR1I3-232ENST00000512372 PXDNQ92626 1479 aa12.03□□□□□ -0.48
NR1I3-232ENST00000512372 NFAT5O94916 1531 aa12.03□□□□□ -0.48
NR1I3-232ENST00000512372 NLRP6P59044 892 aa12.03□□□□□ -0.48
NR1I3-232ENST00000512372 RBM33Q96EV2 1170 aaKnown RBP12.03□□□□□ -0.48
NR1I3-232ENST00000512372 ORAI2Q96SN7 254 aa12.03□□□□□ -0.48
NR1I3-232ENST00000512372 ATXN8OSP0DMR3 200 aa12.02□□□□□ -0.49
NR1I3-232ENST00000512372 ABTB2Q8N961 1025 aa12.02□□□□□ -0.49
NR1I3-232ENST00000512372 RUNDC1Q96C34 613 aa12.02□□□□□ -0.49
NR1I3-232ENST00000512372 ATF5Q9Y2D1 282 aaPredicted RBP12.02□□□□□ -0.49
NR1I3-232ENST00000512372 MAP2P11137 1827 aaKnown RBP12.02□□□□□ -0.49
NR1I3-232ENST00000512372 TNS3Q68CZ2 1445 aa12.02□□□□□ -0.49
NR1I3-232ENST00000512372 FCHSD2O94868 740 aa12.01□□□□□ -0.49
NR1I3-232ENST00000512372 CCDC27Q2M243 656 aa12.01□□□□□ -0.49
NR1I3-232ENST00000512372 KRT28Q7Z3Y7 464 aa12.01□□□□□ -0.49
NR1I3-232ENST00000512372 SLAIN2Q9P270 581 aa12.01□□□□□ -0.49
NR1I3-232ENST00000512372 FOXO3O43524 673 aa12□□□□□ -0.49
NR1I3-232ENST00000512372 BRINP3Q76B58 766 aa12□□□□□ -0.49
NR1I3-232ENST00000512372 ZRANB1Q9UGI0 708 aa12□□□□□ -0.49
NR1I3-232ENST00000512372 EMILIN1Q9Y6C2 1016 aa12□□□□□ -0.49
NR1I3-232ENST00000512372 ZNF521Q96K83 1311 aa12□□□□□ -0.49
NR1I3-232ENST00000512372 NHSL1Q5SYE7 1610 aa12□□□□□ -0.49
NR1I3-232ENST00000512372 PAK3O75914 559 aaPredicted RBP11.99□□□□□ -0.49
NR1I3-232ENST00000512372 IL13P35225 146 aa11.99□□□□□ -0.49
NR1I3-232ENST00000512372 SOS2Q07890 1332 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 227.1 ms