RNA–Protein interactions for RNA: ENST00000512078.5

DEPDC1B-205, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 1,596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-205ENST00000512078 ALS2Q96Q42 1657 aa12.02□□□□□ -0.48
DEPDC1B-205ENST00000512078 NRXN1Q9ULB1 1477 aa12.02□□□□□ -0.48
DEPDC1B-205ENST00000512078 VGFO15240 615 aaPredicted RBP12.02□□□□□ -0.49
DEPDC1B-205ENST00000512078 PLEKHG5O94827 1062 aa12.01□□□□□ -0.49
DEPDC1B-205ENST00000512078 DLC1Q96QB1 1528 aa12.01□□□□□ -0.49
DEPDC1B-205ENST00000512078 ROCK1Q13464 1354 aa12□□□□□ -0.49
DEPDC1B-205ENST00000512078 SHANK3Q9BYB0 1731 aa11.99□□□□□ -0.49
DEPDC1B-205ENST00000512078 SBF2Q86WG5 1849 aa11.99□□□□□ -0.49
DEPDC1B-205ENST00000512078 PHF8Q9UPP1 1060 aa11.99□□□□□ -0.49
DEPDC1B-205ENST00000512078 SPATA31A1Q5TZJ5 1347 aa11.99□□□□□ -0.49
DEPDC1B-205ENST00000512078 PTGER2P43116 358 aa11.98□□□□□ -0.49
DEPDC1B-205ENST00000512078 LMOD2Q6P5Q4 547 aa11.98□□□□□ -0.49
DEPDC1B-205ENST00000512078 SYT17Q9BSW7 474 aa11.98□□□□□ -0.49
DEPDC1B-205ENST00000512078 WAPLQ7Z5K2 1190 aa11.97□□□□□ -0.49
DEPDC1B-205ENST00000512078 PLEKHH1Q9ULM0 1364 aa11.97□□□□□ -0.49
DEPDC1B-205ENST00000512078 FAM50AQ14320 339 aaKnown RBP11.96□□□□□ -0.49
DEPDC1B-205ENST00000512078 FHDC1Q9C0D6 1143 aaPredicted RBP11.96□□□□□ -0.49
DEPDC1B-205ENST00000512078 RPGRIP1LQ68CZ1 1315 aa11.96□□□□□ -0.5
DEPDC1B-205ENST00000512078 ANO8Q9HCE9 1232 aaPredicted RBP11.96□□□□□ -0.5
DEPDC1B-205ENST00000512078 PARP4Q9UKK3 1724 aaKnown RBP11.95□□□□□ -0.5
DEPDC1B-205ENST00000512078 ABCC11Q96J66 1382 aa11.95□□□□□ -0.5
DEPDC1B-205ENST00000512078 PEAK1Q9H792 1746 aa11.95□□□□□ -0.5
DEPDC1B-205ENST00000512078 ZBTB7AO95365 584 aa11.94□□□□□ -0.5
DEPDC1B-205ENST00000512078 PDGFDQ9GZP0 370 aaPredicted RBP11.94□□□□□ -0.5
DEPDC1B-205ENST00000512078 PDE3BQ13370 1112 aa11.93□□□□□ -0.5
DEPDC1B-205ENST00000512078 MAP3K5Q99683 1374 aa11.93□□□□□ -0.5
DEPDC1B-205ENST00000512078 BARGINQ6ZT62 677 aa11.92□□□□□ -0.5
DEPDC1B-205ENST00000512078 PHRF1Q9P1Y6 1649 aaKnown RBP11.92□□□□□ -0.5
DEPDC1B-205ENST00000512078 APLP2Q06481 763 aa11.92□□□□□ -0.5
DEPDC1B-205ENST00000512078 PRDM11Q9NQV5 511 aa11.92□□□□□ -0.5
DEPDC1B-205ENST00000512078 STK26Q9P289 416 aa11.92□□□□□ -0.5
DEPDC1B-205ENST00000512078 PLSCR1O15162 318 aa11.91□□□□□ -0.5
DEPDC1B-205ENST00000512078 ADRA2BP18089 450 aa11.91□□□□□ -0.5
DEPDC1B-205ENST00000512078 SGIP1Q9BQI5 828 aa11.91□□□□□ -0.5
DEPDC1B-205ENST00000512078 ATF5Q9Y2D1 282 aaPredicted RBP11.91□□□□□ -0.5
DEPDC1B-205ENST00000512078 ANKARQ7Z5J8 1434 aa11.9□□□□□ -0.5
DEPDC1B-205ENST00000512078 C11orf95C9JLR9 678 aaPredicted RBP11.9□□□□□ -0.5
DEPDC1B-205ENST00000512078 SSH2Q76I76 1423 aa11.89□□□□□ -0.51
DEPDC1B-205ENST00000512078 MTFR1LQ9H019 292 aa11.88□□□□□ -0.51
DEPDC1B-205ENST00000512078 OVOS2A0A0G2JMS6 1433 aa11.88□□□□□ -0.51
DEPDC1B-205ENST00000512078 OVOS2A0A0J9YW53 1432 aa11.88□□□□□ -0.51
DEPDC1B-205ENST00000512078 OVOS2Q6IE36 1432 aa11.88□□□□□ -0.51
DEPDC1B-205ENST00000512078 YTHDC2Q9H6S0 1430 aaKnown RBP11.88□□□□□ -0.51
DEPDC1B-205ENST00000512078 HSPA6P17066 643 aa11.88□□□□□ -0.51
DEPDC1B-205ENST00000512078 STRN4Q9NRL3 753 aa11.88□□□□□ -0.51
DEPDC1B-205ENST00000512078 KIAA0232Q92628 1395 aa11.88□□□□□ -0.51
DEPDC1B-205ENST00000512078 PMFBP1Q8TBY8 1022 aa11.87□□□□□ -0.51
DEPDC1B-205ENST00000512078 SIRT1Q96EB6 747 aa11.87□□□□□ -0.51
DEPDC1B-205ENST00000512078 USP35Q9P2H5 1018 aa11.87□□□□□ -0.51
DEPDC1B-205ENST00000512078 LMO7Q8WWI1 1683 aa11.86□□□□□ -0.51
DEPDC1B-205ENST00000512078 GPRASP1Q5JY77 1395 aa11.86□□□□□ -0.51
DEPDC1B-205ENST00000512078 GPR162Q16538 588 aa11.86□□□□□ -0.51
DEPDC1B-205ENST00000512078 BCL11BQ9C0K0 894 aaPredicted RBP11.86□□□□□ -0.51
DEPDC1B-205ENST00000512078 LRRC37A3O60309 1634 aa11.86□□□□□ -0.51
DEPDC1B-205ENST00000512078 ADGRF5Q8IZF2 1346 aa11.86□□□□□ -0.51
DEPDC1B-205ENST00000512078 ARXQ96QS3 562 aa11.85□□□□□ -0.51
DEPDC1B-205ENST00000512078 AKAP12Q02952 1782 aa11.85□□□□□ -0.51
DEPDC1B-205ENST00000512078 COL24A1Q17RW2 1714 aa11.85□□□□□ -0.51
DEPDC1B-205ENST00000512078 ATP7BP35670 1465 aa11.85□□□□□ -0.51
DEPDC1B-205ENST00000512078 CHRNA2Q15822 529 aa11.84□□□□□ -0.51
DEPDC1B-205ENST00000512078 TMEM132EQ6IEE7 984 aa11.84□□□□□ -0.51
DEPDC1B-205ENST00000512078 PROM2Q8N271 834 aa11.84□□□□□ -0.51
DEPDC1B-205ENST00000512078 TCP11L2Q8N4U5 519 aa11.84□□□□□ -0.51
DEPDC1B-205ENST00000512078 WNK3Q9BYP7 1800 aa11.84□□□□□ -0.51
DEPDC1B-205ENST00000512078 ACIN1Q9UKV3 1341 aaKnown RBP11.84□□□□□ -0.51
DEPDC1B-205ENST00000512078 PIK3C2GO75747 1445 aa11.84□□□□□ -0.51
DEPDC1B-205ENST00000512078 SLC15A2Q16348 729 aa11.84□□□□□ -0.51
DEPDC1B-205ENST00000512078 STK32BQ9NY57 414 aa11.84□□□□□ -0.51
DEPDC1B-205ENST00000512078 DHX57Q6P158 1386 aaKnown RBP11.83□□□□□ -0.52
DEPDC1B-205ENST00000512078 GOLGB1Q14789 3259 aaKnown RBP11.83□□□□□ -0.52
DEPDC1B-205ENST00000512078 THRAP3Q9Y2W1 955 aaKnown RBP11.83□□□□□ -0.52
DEPDC1B-205ENST00000512078 TOPAZ1Q8N9V7 1692 aa11.82□□□□□ -0.52
DEPDC1B-205ENST00000512078 PAPPAQ13219 1627 aa11.81□□□□□ -0.52
DEPDC1B-205ENST00000512078 ATP10DQ9P241 1426 aa11.81□□□□□ -0.52
DEPDC1B-205ENST00000512078 ITSN1Q15811 1721 aa11.81□□□□□ -0.52
DEPDC1B-205ENST00000512078 EVA1CP58658 441 aa11.81□□□□□ -0.52
DEPDC1B-205ENST00000512078 LARP1Q6PKG0 1096 aaKnown RBP11.81□□□□□ -0.52
DEPDC1B-205ENST00000512078 AATKQ6ZMQ8 1374 aa11.8□□□□□ -0.52
DEPDC1B-205ENST00000512078 ANKRD30BQ9BXX2 1392 aa11.8□□□□□ -0.52
DEPDC1B-205ENST00000512078 QSER1Q2KHR3 1735 aa11.8□□□□□ -0.52
DEPDC1B-205ENST00000512078 BCL9O00512 1426 aa11.8□□□□□ -0.52
DEPDC1B-205ENST00000512078 TULP4Q9NRJ4 1543 aa11.8□□□□□ -0.52
DEPDC1B-205ENST00000512078 PTF1AQ7RTS3 328 aa11.79□□□□□ -0.52
DEPDC1B-205ENST00000512078 TXNRD1Q16881 649 aa11.79□□□□□ -0.52
DEPDC1B-205ENST00000512078 EIF3AQ14152 1382 aaKnown RBP11.79□□□□□ -0.52
DEPDC1B-205ENST00000512078 ZC3H6P61129 1189 aaKnown RBP11.78□□□□□ -0.52
DEPDC1B-205ENST00000512078 PAK3O75914 559 aaPredicted RBP11.77□□□□□ -0.53
DEPDC1B-205ENST00000512078 PRR36Q9H6K5 1346 aa11.77□□□□□ -0.53
DEPDC1B-205ENST00000512078 COL5A2P05997 1499 aaPredicted RBP11.77□□□□□ -0.53
DEPDC1B-205ENST00000512078 SPATA31E1Q6ZUB1 1445 aa11.76□□□□□ -0.53
DEPDC1B-205ENST00000512078 CPDO75976 1380 aa11.76□□□□□ -0.53
DEPDC1B-205ENST00000512078 SLC34A2O95436 690 aa11.76□□□□□ -0.53
DEPDC1B-205ENST00000512078 PELP1Q8IZL8 1130 aaKnown RBP11.76□□□□□ -0.53
DEPDC1B-205ENST00000512078 PRAM1Q96QH2 718 aa11.76□□□□□ -0.53
DEPDC1B-205ENST00000512078 GPBP1L1Q9HC44 474 aaPredicted RBP11.76□□□□□ -0.53
DEPDC1B-205ENST00000512078 CRB1P82279 1406 aa11.76□□□□□ -0.53
DEPDC1B-205ENST00000512078 ADCY9O60503 1353 aa11.76□□□□□ -0.53
DEPDC1B-205ENST00000512078 GRIN3BO60391 1043 aa11.75□□□□□ -0.53
DEPDC1B-205ENST00000512078 SAFB2Q14151 953 aaKnown RBP eCLIP11.75□□□□□ -0.53
DEPDC1B-205ENST00000512078 PRELPP51888 382 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms