RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 TRPM3Q9HCF6 1732 aaPredicted RBP8.49□□□□□ -1.05
RNF4-217ENST00000511892 C8orf37Q96NL8 207 aa8.49□□□□□ -1.05
RNF4-217ENST00000511892 POGKQ9P215 609 aa8.49□□□□□ -1.05
RNF4-217ENST00000511892 EP400Q96L91 3159 aa8.49□□□□□ -1.05
RNF4-217ENST00000511892 ITSN1Q15811 1721 aa8.49□□□□□ -1.05
RNF4-217ENST00000511892 ADAMTS2O95450 1211 aa8.48□□□□□ -1.05
RNF4-217ENST00000511892 DCBLD2Q96PD2 775 aa8.48□□□□□ -1.05
RNF4-217ENST00000511892 CREBZFQ9NS37 354 aa8.48□□□□□ -1.05
RNF4-217ENST00000511892 PHF8Q9UPP1 1060 aa8.48□□□□□ -1.05
RNF4-217ENST00000511892 ANKARQ7Z5J8 1434 aa8.47□□□□□ -1.05
RNF4-217ENST00000511892 ALS2Q96Q42 1657 aa8.47□□□□□ -1.05
RNF4-217ENST00000511892 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.47□□□□□ -1.05
RNF4-217ENST00000511892 KRT28Q7Z3Y7 464 aa8.47□□□□□ -1.05
RNF4-217ENST00000511892 HIRIP3Q9BW71 556 aaPredicted RBP8.47□□□□□ -1.05
RNF4-217ENST00000511892 SPATA31A3Q5VYP0 1347 aa8.47□□□□□ -1.05
RNF4-217ENST00000511892 MINK1Q8N4C8 1332 aaPredicted RBP8.47□□□□□ -1.05
RNF4-217ENST00000511892 TOPAZ1Q8N9V7 1692 aa8.46□□□□□ -1.05
RNF4-217ENST00000511892 CDK12Q9NYV4 1490 aaPredicted RBP8.46□□□□□ -1.05
RNF4-217ENST00000511892 TULP4Q9NRJ4 1543 aa8.46□□□□□ -1.05
RNF4-217ENST00000511892 RXRBP28702 533 aa8.46□□□□□ -1.06
RNF4-217ENST00000511892 NBPF1Q3BBV0 1214 aa8.46□□□□□ -1.06
RNF4-217ENST00000511892 NGLY1Q96IV0 654 aa8.46□□□□□ -1.06
RNF4-217ENST00000511892 PRR36Q9H6K5 1346 aa8.46□□□□□ -1.06
RNF4-217ENST00000511892 TRPM1Q7Z4N2 1603 aa8.46□□□□□ -1.06
RNF4-217ENST00000511892 CRYBG1Q9Y4K1 1723 aa8.46□□□□□ -1.06
RNF4-217ENST00000511892 TNS3Q68CZ2 1445 aa8.46□□□□□ -1.06
RNF4-217ENST00000511892 SPDYE4A6NLX3 237 aa8.45□□□□□ -1.06
RNF4-217ENST00000511892 WASLO00401 505 aaPredicted RBP8.45□□□□□ -1.06
RNF4-217ENST00000511892 FNBP4Q8N3X1 1017 aaPredicted RBP8.45□□□□□ -1.06
RNF4-217ENST00000511892 PMFBP1Q8TBY8 1022 aa8.45□□□□□ -1.06
RNF4-217ENST00000511892 SIN3AQ96ST3 1273 aa8.45□□□□□ -1.06
RNF4-217ENST00000511892 QTRT2Q9H974 415 aaKnown RBP8.45□□□□□ -1.06
RNF4-217ENST00000511892 PLCH1Q4KWH8 1693 aa8.45□□□□□ -1.06
RNF4-217ENST00000511892 QRICH2Q9H0J4 1663 aa8.45□□□□□ -1.06
RNF4-217ENST00000511892 SBNO1A3KN83 1393 aa8.45□□□□□ -1.06
RNF4-217ENST00000511892 BCL9LQ86UU0 1499 aa8.45□□□□□ -1.06
RNF4-217ENST00000511892 NWD2Q9ULI1 1742 aa8.44□□□□□ -1.06
RNF4-217ENST00000511892 TRIM26Q12899 539 aaPredicted RBP8.44□□□□□ -1.06
RNF4-217ENST00000511892 L3MBTL2Q969R5 705 aa8.44□□□□□ -1.06
RNF4-217ENST00000511892 USP21Q9UK80 565 aa8.44□□□□□ -1.06
RNF4-217ENST00000511892 BRWD3Q6RI45 1802 aa8.44□□□□□ -1.06
RNF4-217ENST00000511892 RGS12O14924 1447 aa8.44□□□□□ -1.06
RNF4-217ENST00000511892 ATRNO75882 1429 aa8.44□□□□□ -1.06
RNF4-217ENST00000511892 ATP7BP35670 1465 aa8.44□□□□□ -1.06
RNF4-217ENST00000511892 RBM6P78332 1123 aaKnown RBP8.43□□□□□ -1.06
RNF4-217ENST00000511892 PSME1Q06323 249 aa8.43□□□□□ -1.06
RNF4-217ENST00000511892 SLIT2O94813 1529 aa8.43□□□□□ -1.06
RNF4-217ENST00000511892 CABLES1Q8TDN4 633 aa8.42□□□□□ -1.06
RNF4-217ENST00000511892 EIF3AQ14152 1382 aaKnown RBP8.42□□□□□ -1.06
RNF4-217ENST00000511892 NRAPQ86VF7 1730 aa8.42□□□□□ -1.06
RNF4-217ENST00000511892 GLI3P10071 1580 aa8.41□□□□□ -1.06
RNF4-217ENST00000511892 ARHGEF10O15013 1369 aa8.41□□□□□ -1.06
RNF4-217ENST00000511892 NEUROD1Q13562 356 aa8.41□□□□□ -1.06
RNF4-217ENST00000511892 UPF1Q92900 1129 aaKnown RBP eCLIP8.41□□□□□ -1.06
RNF4-217ENST00000511892 NUDT16Q96DE0 195 aaKnown RBP8.41□□□□□ -1.06
RNF4-217ENST00000511892 CDK19Q9BWU1 502 aa8.41□□□□□ -1.06
RNF4-217ENST00000511892 TRPC5Q9UL62 973 aaPredicted RBP8.41□□□□□ -1.06
RNF4-217ENST00000511892 PHRF1Q9P1Y6 1649 aaKnown RBP8.4□□□□□ -1.06
RNF4-217ENST00000511892 GALR2O43603 387 aaPredicted RBP8.4□□□□□ -1.06
RNF4-217ENST00000511892 PLEKHG5O94827 1062 aa8.4□□□□□ -1.06
RNF4-217ENST00000511892 LMOD2Q6P5Q4 547 aa8.4□□□□□ -1.06
RNF4-217ENST00000511892 COL14A1Q05707 1796 aaKnown RBP8.4□□□□□ -1.07
RNF4-217ENST00000511892 POLR3AO14802 1390 aaPredicted RBP8.39□□□□□ -1.07
RNF4-217ENST00000511892 GPRASP1Q5JY77 1395 aa8.39□□□□□ -1.07
RNF4-217ENST00000511892 UNC5CLQ8IV45 518 aa8.39□□□□□ -1.07
RNF4-217ENST00000511892 ZNF579Q8NAF0 562 aaKnown RBP8.39□□□□□ -1.07
RNF4-217ENST00000511892 NGDNQ8NEJ9 315 aaKnown RBP8.39□□□□□ -1.07
RNF4-217ENST00000511892 RALGAPBQ86X10 1494 aa8.38□□□□□ -1.07
RNF4-217ENST00000511892 AKAP12Q02952 1782 aa8.38□□□□□ -1.07
RNF4-217ENST00000511892 CENPJQ9HC77 1338 aaPredicted RBP8.38□□□□□ -1.07
RNF4-217ENST00000511892 PLEKHG3A1L390 1219 aa8.38□□□□□ -1.07
RNF4-217ENST00000511892 FAM83GA6ND36 823 aa8.38□□□□□ -1.07
RNF4-217ENST00000511892 NBPF8Q3BBV2 869 aa8.38□□□□□ -1.07
RNF4-217ENST00000511892 GJD4Q96KN9 370 aaPredicted RBP8.38□□□□□ -1.07
RNF4-217ENST00000511892 PHF12Q96QT6 1004 aa8.38□□□□□ -1.07
RNF4-217ENST00000511892 ACEP12821 1306 aa8.37□□□□□ -1.07
RNF4-217ENST00000511892 PCGF6Q9BYE7 350 aa8.37□□□□□ -1.07
RNF4-217ENST00000511892 CCDC61Q9Y6R9 512 aa8.37□□□□□ -1.07
RNF4-217ENST00000511892 PAK3O75914 559 aaPredicted RBP8.36□□□□□ -1.07
RNF4-217ENST00000511892 CLCN6P51797 869 aa8.36□□□□□ -1.07
RNF4-217ENST00000511892 HAP1P54257 671 aaPredicted RBP8.36□□□□□ -1.07
RNF4-217ENST00000511892 CABP2Q9NPB3 220 aa8.36□□□□□ -1.07
RNF4-217ENST00000511892 SRCAPQ6ZRS2 3230 aa8.36□□□□□ -1.07
RNF4-217ENST00000511892 PPIP5K1Q6PFW1 1433 aa8.36□□□□□ -1.07
RNF4-217ENST00000511892 ROCK2O75116 1388 aaKnown RBP8.35□□□□□ -1.07
RNF4-217ENST00000511892 SRPK2P78362 688 aaKnown RBP8.35□□□□□ -1.07
RNF4-217ENST00000511892 VPS72Q15906 364 aa8.35□□□□□ -1.07
RNF4-217ENST00000511892 NRKQ7Z2Y5 1582 aa8.35□□□□□ -1.07
RNF4-217ENST00000511892 ATAD2Q6PL18 1390 aa8.35□□□□□ -1.07
RNF4-217ENST00000511892 PIK3C2AO00443 1686 aa8.34□□□□□ -1.07
RNF4-217ENST00000511892 NUTM2GQ5VZR2 741 aa8.34□□□□□ -1.07
RNF4-217ENST00000511892 BTG4Q9NY30 223 aa8.34□□□□□ -1.07
RNF4-217ENST00000511892 RGPD5Q99666 1765 aa8.34□□□□□ -1.07
RNF4-217ENST00000511892 LMO7Q8WWI1 1683 aa8.34□□□□□ -1.08
RNF4-217ENST00000511892 ONECUT3O60422 494 aaPredicted RBP8.33□□□□□ -1.08
RNF4-217ENST00000511892 MON2Q7Z3U7 1717 aa8.33□□□□□ -1.08
RNF4-217ENST00000511892 CABP1Q9NZU7 370 aa8.33□□□□□ -1.08
RNF4-217ENST00000511892 KIAA0232Q92628 1395 aa8.33□□□□□ -1.08
RNF4-217ENST00000511892 COL18A1P39060 1754 aa8.33□□□□□ -1.08
RNF4-217ENST00000511892 EVC2Q86UK5 1308 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms