RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 SEPT12Q8IYM1 358 aa18.19■□□□□ 0.5
KDM3B-206ENST00000509468 L3MBTL2Q969R5 705 aa18.19■□□□□ 0.5
KDM3B-206ENST00000509468 BTG4Q9NY30 223 aa18.19■□□□□ 0.5
KDM3B-206ENST00000509468 ATP7BP35670 1465 aa18.18■□□□□ 0.5
KDM3B-206ENST00000509468 ACEP12821 1306 aa18.18■□□□□ 0.5
KDM3B-206ENST00000509468 COL14A1Q05707 1796 aaKnown RBP18.17■□□□□ 0.5
KDM3B-206ENST00000509468 CENPJQ9HC77 1338 aaPredicted RBP18.17■□□□□ 0.5
KDM3B-206ENST00000509468 BRWD3Q6RI45 1802 aa18.16■□□□□ 0.5
KDM3B-206ENST00000509468 SRPK2P78362 688 aaKnown RBP18.16■□□□□ 0.5
KDM3B-206ENST00000509468 POLR3AO14802 1390 aaPredicted RBP18.16■□□□□ 0.5
KDM3B-206ENST00000509468 NEUROD1Q13562 356 aa18.15■□□□□ 0.5
KDM3B-206ENST00000509468 SIN3AQ96ST3 1273 aa18.15■□□□□ 0.5
KDM3B-206ENST00000509468 PRDM11Q9NQV5 511 aa18.15■□□□□ 0.5
KDM3B-206ENST00000509468 KRT27Q7Z3Y8 459 aa18.14■□□□□ 0.49
KDM3B-206ENST00000509468 SF3B2Q13435 895 aaKnown RBP18.13■□□□□ 0.49
KDM3B-206ENST00000509468 ABTB2Q8N961 1025 aa18.13■□□□□ 0.49
KDM3B-206ENST00000509468 ZRANB1Q9UGI0 708 aa18.13■□□□□ 0.49
KDM3B-206ENST00000509468 A0A0G2JS52 829 aa18.12■□□□□ 0.49
KDM3B-206ENST00000509468 MYT1Q01538 1121 aa18.12■□□□□ 0.49
KDM3B-206ENST00000509468 TOPAZ1Q8N9V7 1692 aa18.12■□□□□ 0.49
KDM3B-206ENST00000509468 CRYBG1Q9Y4K1 1723 aa18.12■□□□□ 0.49
KDM3B-206ENST00000509468 FAM98CQ17RN3 349 aaKnown RBP18.11■□□□□ 0.49
KDM3B-206ENST00000509468 BLMP54132 1417 aaPredicted RBP18.11■□□□□ 0.49
KDM3B-206ENST00000509468 NRAPQ86VF7 1730 aa18.11■□□□□ 0.49
KDM3B-206ENST00000509468 SPATA31A5Q5VU36 1347 aa18.1■□□□□ 0.49
KDM3B-206ENST00000509468 SPATA31A7Q8IWB4 1347 aa18.1■□□□□ 0.49
KDM3B-206ENST00000509468 NUTM2GQ5VZR2 741 aa18.1■□□□□ 0.49
KDM3B-206ENST00000509468 CABP2Q9NPB3 220 aa18.1■□□□□ 0.49
KDM3B-206ENST00000509468 EP400Q96L91 3159 aa18.1■□□□□ 0.49
KDM3B-206ENST00000509468 BRD4O60885 1362 aaPredicted RBP18.09■□□□□ 0.49
KDM3B-206ENST00000509468 ZC3H6P61129 1189 aaKnown RBP18.09■□□□□ 0.49
KDM3B-206ENST00000509468 NLRP13Q86W25 1043 aa18.09■□□□□ 0.49
KDM3B-206ENST00000509468 QRICH2Q9H0J4 1663 aa18.09■□□□□ 0.49
KDM3B-206ENST00000509468 PPIP5K1Q6PFW1 1433 aa18.08■□□□□ 0.49
KDM3B-206ENST00000509468 KIAA0232Q92628 1395 aa18.08■□□□□ 0.49
KDM3B-206ENST00000509468 EVC2Q86UK5 1308 aa18.08■□□□□ 0.49
KDM3B-206ENST00000509468 EVA1CP58658 441 aa18.08■□□□□ 0.48
KDM3B-206ENST00000509468 CABP1Q9NZU7 370 aa18.07■□□□□ 0.48
KDM3B-206ENST00000509468 TRPM1Q7Z4N2 1603 aa18.06■□□□□ 0.48
KDM3B-206ENST00000509468 PHRF1Q9P1Y6 1649 aaKnown RBP18.06■□□□□ 0.48
KDM3B-206ENST00000509468 CHRNA2Q15822 529 aa18.06■□□□□ 0.48
KDM3B-206ENST00000509468 ROCK2O75116 1388 aaKnown RBP18.05■□□□□ 0.48
KDM3B-206ENST00000509468 SPATA31A1Q5TZJ5 1347 aa18.04■□□□□ 0.48
KDM3B-206ENST00000509468 GCP02774 474 aa18.04■□□□□ 0.48
KDM3B-206ENST00000509468 ZNF692Q9BU19 519 aaPredicted RBP18.04■□□□□ 0.48
KDM3B-206ENST00000509468 STRN4Q9NRL3 753 aa18.04■□□□□ 0.48
KDM3B-206ENST00000509468 DEFB132Q7Z7B7 95 aa18.02■□□□□ 0.48
KDM3B-206ENST00000509468 CPDO75976 1380 aa18.02■□□□□ 0.47
KDM3B-206ENST00000509468 USP19O94966 1318 aa18.01■□□□□ 0.47
KDM3B-206ENST00000509468 NLRP6P59044 892 aa18.01■□□□□ 0.47
KDM3B-206ENST00000509468 BAG6P46379 1132 aa18■□□□□ 0.47
KDM3B-206ENST00000509468 BARGINQ6ZT62 677 aa17.99■□□□□ 0.47
KDM3B-206ENST00000509468 USP6P35125 1406 aa17.98■□□□□ 0.47
KDM3B-206ENST00000509468 FAM196AQ6ZSG2 479 aa17.98■□□□□ 0.47
KDM3B-206ENST00000509468 USP35Q9P2H5 1018 aa17.98■□□□□ 0.47
KDM3B-206ENST00000509468 THSD7AQ9UPZ6 1657 aa17.97■□□□□ 0.47
KDM3B-206ENST00000509468 CAMTA1Q9Y6Y1 1673 aa17.97■□□□□ 0.47
KDM3B-206ENST00000509468 NRKQ7Z2Y5 1582 aa17.97■□□□□ 0.47
KDM3B-206ENST00000509468 PDE3BQ13370 1112 aa17.97■□□□□ 0.47
KDM3B-206ENST00000509468 THRAP3Q9Y2W1 955 aaKnown RBP17.97■□□□□ 0.47
KDM3B-206ENST00000509468 FAM182BQ5T319 152 aa17.96■□□□□ 0.47
KDM3B-206ENST00000509468 LARP1Q6PKG0 1096 aaKnown RBP17.96■□□□□ 0.47
KDM3B-206ENST00000509468 TCP11L2Q8N4U5 519 aa17.96■□□□□ 0.47
KDM3B-206ENST00000509468 CARD11Q9BXL7 1154 aa17.96■□□□□ 0.47
KDM3B-206ENST00000509468 SSH2Q76I76 1423 aa17.96■□□□□ 0.47
KDM3B-206ENST00000509468 RGPD1P0DJD0 1748 aa17.95■□□□□ 0.46
KDM3B-206ENST00000509468 TONSLQ96HA7 1378 aa17.94■□□□□ 0.46
KDM3B-206ENST00000509468 KCNH5Q8NCM2 988 aa17.94■□□□□ 0.46
KDM3B-206ENST00000509468 TTC21BQ7Z4L5 1316 aa17.94■□□□□ 0.46
KDM3B-206ENST00000509468 LMO7Q8WWI1 1683 aa17.93■□□□□ 0.46
KDM3B-206ENST00000509468 ZBTB7CA1YPR0 619 aa17.93■□□□□ 0.46
KDM3B-206ENST00000509468 TRIM26Q12899 539 aaPredicted RBP17.93■□□□□ 0.46
KDM3B-206ENST00000509468 TTC21AQ8NDW8 1320 aa17.93■□□□□ 0.46
KDM3B-206ENST00000509468 AATKQ6ZMQ8 1374 aa17.92■□□□□ 0.46
KDM3B-206ENST00000509468 AKAP12Q02952 1782 aa17.92■□□□□ 0.46
KDM3B-206ENST00000509468 SBNO2Q9Y2G9 1366 aa17.91■□□□□ 0.46
KDM3B-206ENST00000509468 C11orf95C9JLR9 678 aaPredicted RBP17.91■□□□□ 0.46
KDM3B-206ENST00000509468 EN1Q05925 392 aaPredicted RBP17.91■□□□□ 0.46
KDM3B-206ENST00000509468 KTN1Q86UP2 1357 aaKnown RBP17.91■□□□□ 0.46
KDM3B-206ENST00000509468 SLIT3O75094 1523 aa17.9■□□□□ 0.46
KDM3B-206ENST00000509468 CRB1P82279 1406 aa17.89■□□□□ 0.46
KDM3B-206ENST00000509468 CPSF1Q10570 1443 aaKnown RBP17.89■□□□□ 0.46
KDM3B-206ENST00000509468 COL5A2P05997 1499 aaPredicted RBP17.89■□□□□ 0.45
KDM3B-206ENST00000509468 SLC24A1O60721 1099 aa17.89■□□□□ 0.45
KDM3B-206ENST00000509468 TRIM37O94972 964 aa17.89■□□□□ 0.45
KDM3B-206ENST00000509468 PIK3C2AO00443 1686 aa17.89■□□□□ 0.45
KDM3B-206ENST00000509468 TOM1L2Q6ZVM7 507 aa17.88■□□□□ 0.45
KDM3B-206ENST00000509468 ARHGEF25Q86VW2 580 aa17.88■□□□□ 0.45
KDM3B-206ENST00000509468 PUS7Q96PZ0 661 aaKnown RBP17.88■□□□□ 0.45
KDM3B-206ENST00000509468 APBA3O96018 575 aa17.87■□□□□ 0.45
KDM3B-206ENST00000509468 TMC1Q8TDI8 760 aa17.87■□□□□ 0.45
KDM3B-206ENST00000509468 DISP2A7MBM2 1401 aa17.87■□□□□ 0.45
KDM3B-206ENST00000509468 HDGFL2Q7Z4V5 671 aaPredicted RBP17.86■□□□□ 0.45
KDM3B-206ENST00000509468 COL18A1P39060 1754 aa17.86■□□□□ 0.45
KDM3B-206ENST00000509468 EZH2Q15910 746 aaKnown RBP17.85■□□□□ 0.45
KDM3B-206ENST00000509468 CAMKK2Q96RR4 588 aa17.85■□□□□ 0.45
KDM3B-206ENST00000509468 CDCA7Q9BWT1 371 aaPredicted RBP17.85■□□□□ 0.45
KDM3B-206ENST00000509468 TNS1Q9HBL0 1735 aaKnown RBP17.85■□□□□ 0.45
KDM3B-206ENST00000509468 TERF2IPQ9NYB0 399 aa17.85■□□□□ 0.45
KDM3B-206ENST00000509468 AXIN2Q9Y2T1 843 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms