RNA–Protein interactions for RNA: ENST00000508473.5

SRPK1-210, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-210ENST00000508473 MARF1Q9Y4F3 1742 aaKnown RBP34.18■■■■□ 3.06
SRPK1-210ENST00000508473 RBM6P78332 1123 aaKnown RBP34.18■■■■□ 3.06
SRPK1-210ENST00000508473 NUTM2GQ5VZR2 741 aa34.18■■■■□ 3.06
SRPK1-210ENST00000508473 TRPC5Q9UL62 973 aaPredicted RBP34.18■■■■□ 3.06
SRPK1-210ENST00000508473 BCL9LQ86UU0 1499 aa34.15■■■■□ 3.06
SRPK1-210ENST00000508473 ABCA3Q99758 1704 aa34.14■■■■□ 3.06
SRPK1-210ENST00000508473 SBNO2Q9Y2G9 1366 aa34.13■■■■□ 3.05
SRPK1-210ENST00000508473 TIMELESSQ9UNS1 1208 aa34.13■■■■□ 3.05
SRPK1-210ENST00000508473 ATRNO75882 1429 aa34.12■■■■□ 3.05
SRPK1-210ENST00000508473 SLIT2O94813 1529 aa34.11■■■■□ 3.05
SRPK1-210ENST00000508473 FAM83GA6ND36 823 aa34.1■■■■□ 3.05
SRPK1-210ENST00000508473 UNC5CLQ8IV45 518 aa34.1■■■■□ 3.05
SRPK1-210ENST00000508473 ABTB2Q8N961 1025 aa34.1■■■■□ 3.05
SRPK1-210ENST00000508473 ST20-MTHFSA0A0A6YYL1 179 aa34.09■■■■□ 3.05
SRPK1-210ENST00000508473 ATAD2Q6PL18 1390 aa34.09■■■■□ 3.05
SRPK1-210ENST00000508473 CDK12Q9NYV4 1490 aaPredicted RBP34.07■■■■□ 3.05
SRPK1-210ENST00000508473 USP6P35125 1406 aa34.06■■■■□ 3.04
SRPK1-210ENST00000508473 RGS12O14924 1447 aa34.05■■■■□ 3.04
SRPK1-210ENST00000508473 TESK2Q96S53 571 aa34.03■■■■□ 3.04
SRPK1-210ENST00000508473 GJD4Q96KN9 370 aaPredicted RBP34.02■■■■□ 3.04
SRPK1-210ENST00000508473 CRYBG1Q9Y4K1 1723 aa34.01■■■■□ 3.04
SRPK1-210ENST00000508473 TMC1Q8TDI8 760 aa34.01■■■■□ 3.03
SRPK1-210ENST00000508473 BRD4O60885 1362 aaPredicted RBP34■■■■□ 3.03
SRPK1-210ENST00000508473 USP47Q96K76 1375 aa34■■■■□ 3.03
SRPK1-210ENST00000508473 ZC3H6P61129 1189 aaKnown RBP34■■■■□ 3.03
SRPK1-210ENST00000508473 PRDM11Q9NQV5 511 aa34■■■■□ 3.03
SRPK1-210ENST00000508473 NLRP13Q86W25 1043 aa33.99■■■■□ 3.03
SRPK1-210ENST00000508473 ZNF692Q9BU19 519 aaPredicted RBP33.99■■■■□ 3.03
SRPK1-210ENST00000508473 BTG4Q9NY30 223 aa33.99■■■■□ 3.03
SRPK1-210ENST00000508473 PLCH1Q4KWH8 1693 aa33.99■■■■□ 3.03
SRPK1-210ENST00000508473 KIAA0232Q92628 1395 aa33.98■■■■□ 3.03
SRPK1-210ENST00000508473 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.97■■■■□ 3.03
SRPK1-210ENST00000508473 CCDC9Q9Y3X0 531 aaKnown RBP33.97■■■■□ 3.03
SRPK1-210ENST00000508473 SSH2Q76I76 1423 aa33.96■■■■□ 3.03
SRPK1-210ENST00000508473 CHRNA2Q15822 529 aa33.96■■■■□ 3.03
SRPK1-210ENST00000508473 PHRF1Q9P1Y6 1649 aaKnown RBP33.95■■■■□ 3.03
SRPK1-210ENST00000508473 NLRP6P59044 892 aa33.95■■■■□ 3.03
SRPK1-210ENST00000508473 VPS72Q15906 364 aa33.95■■■■□ 3.03
SRPK1-210ENST00000508473 SLC12A5Q9H2X9 1139 aa33.95■■■■□ 3.03
SRPK1-210ENST00000508473 USP19O94966 1318 aa33.95■■■■□ 3.03
SRPK1-210ENST00000508473 TTC21BQ7Z4L5 1316 aa33.95■■■■□ 3.03
SRPK1-210ENST00000508473 KTN1Q86UP2 1357 aaKnown RBP33.94■■■■□ 3.02
SRPK1-210ENST00000508473 CPSF1Q10570 1443 aaKnown RBP33.94■■■■□ 3.02
SRPK1-210ENST00000508473 NWD2Q9ULI1 1742 aa33.93■■■■□ 3.02
SRPK1-210ENST00000508473 COL14A1Q05707 1796 aaKnown RBP33.93■■■■□ 3.02
SRPK1-210ENST00000508473 GCP02774 474 aa33.91■■■■□ 3.02
SRPK1-210ENST00000508473 PUS7Q96PZ0 661 aaKnown RBP33.91■■■■□ 3.02
SRPK1-210ENST00000508473 GLI3P10071 1580 aa33.89■■■■□ 3.02
SRPK1-210ENST00000508473 SLC24A1O60721 1099 aa33.89■■■■□ 3.02
SRPK1-210ENST00000508473 AKAP12Q02952 1782 aa33.89■■■■□ 3.02
SRPK1-210ENST00000508473 NRKQ7Z2Y5 1582 aa33.89■■■■□ 3.02
SRPK1-210ENST00000508473 HDGFL2Q7Z4V5 671 aaPredicted RBP33.87■■■■□ 3.01
SRPK1-210ENST00000508473 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.87■■■■□ 3.01
SRPK1-210ENST00000508473 CD163L1Q9NR16 1453 aa33.87■■■■□ 3.01
SRPK1-210ENST00000508473 TMF1P82094 1093 aa33.86■■■■□ 3.01
SRPK1-210ENST00000508473 UPF1Q92900 1129 aaKnown RBP eCLIP33.86■■■■□ 3.01
SRPK1-210ENST00000508473 TTC21AQ8NDW8 1320 aa33.85■■■■□ 3.01
SRPK1-210ENST00000508473 NRAPQ86VF7 1730 aa33.85■■■■□ 3.01
SRPK1-210ENST00000508473 PIK3C2AO00443 1686 aa33.85■■■■□ 3.01
SRPK1-210ENST00000508473 ZBTB7CA1YPR0 619 aa33.85■■■■□ 3.01
SRPK1-210ENST00000508473 STRN4Q9NRL3 753 aa33.84■■■■□ 3.01
SRPK1-210ENST00000508473 TERF2IPQ9NYB0 399 aa33.83■■■■□ 3.01
SRPK1-210ENST00000508473 CPDO75976 1380 aa33.82■■■■□ 3
SRPK1-210ENST00000508473 SOX12O15370 315 aa33.8■■■■□ 3
SRPK1-210ENST00000508473 SEPT12Q8IYM1 358 aa33.8■■■■□ 3
SRPK1-210ENST00000508473 ZRANB1Q9UGI0 708 aa33.8■■■■□ 3
SRPK1-210ENST00000508473 A0A1W2PP64 1363 aa33.8■■■■□ 3
SRPK1-210ENST00000508473 SLIT3O75094 1523 aa33.79■■■■□ 3
SRPK1-210ENST00000508473 MON2Q7Z3U7 1717 aa33.79■■■■□ 3
SRPK1-210ENST00000508473 EVA1CP58658 441 aa33.78■■■■□ 3
SRPK1-210ENST00000508473 NME9Q86XW9 330 aa33.78■■■■□ 3
SRPK1-210ENST00000508473 SPATA31A5Q5VU36 1347 aa33.78■■■■□ 3
SRPK1-210ENST00000508473 SPATA31A7Q8IWB4 1347 aa33.78■■■■□ 3
SRPK1-210ENST00000508473 A0A0G2JS52 829 aa33.77■■■■□ 3
SRPK1-210ENST00000508473 MYT1Q01538 1121 aa33.77■■■■□ 3
SRPK1-210ENST00000508473 FAM98CQ17RN3 349 aaKnown RBP33.77■■■■□ 3
SRPK1-210ENST00000508473 NINLQ9Y2I6 1382 aa33.76■■■■□ 3
SRPK1-210ENST00000508473 CAMTA1Q9Y6Y1 1673 aa33.74■■■□□ 2.99
SRPK1-210ENST00000508473 EDC4Q6P2E9 1401 aaKnown RBP33.74■■■□□ 2.99
SRPK1-210ENST00000508473 ONECUT3O60422 494 aaPredicted RBP33.74■■■□□ 2.99
SRPK1-210ENST00000508473 KCNH5Q8NCM2 988 aa33.73■■■□□ 2.99
SRPK1-210ENST00000508473 CDCA8Q53HL2 280 aa33.72■■■□□ 2.99
SRPK1-210ENST00000508473 LARP1Q6PKG0 1096 aaKnown RBP33.7■■■□□ 2.99
SRPK1-210ENST00000508473 USP35Q9P2H5 1018 aa33.7■■■□□ 2.99
SRPK1-210ENST00000508473 SPATA31A1Q5TZJ5 1347 aa33.7■■■□□ 2.99
SRPK1-210ENST00000508473 USP31Q70CQ4 1352 aa33.7■■■□□ 2.98
SRPK1-210ENST00000508473 LMO7Q8WWI1 1683 aa33.69■■■□□ 2.98
SRPK1-210ENST00000508473 AATKQ6ZMQ8 1374 aa33.68■■■□□ 2.98
SRPK1-210ENST00000508473 HSPA5P11021 654 aaKnown RBP33.67■■■□□ 2.98
SRPK1-210ENST00000508473 EIF4G2P78344 907 aaKnown RBP eCLIP33.67■■■□□ 2.98
SRPK1-210ENST00000508473 ARHGEF25Q86VW2 580 aa33.67■■■□□ 2.98
SRPK1-210ENST00000508473 ANKRD36BQ8N2N9 1353 aa33.66■■■□□ 2.98
SRPK1-210ENST00000508473 KRT27Q7Z3Y8 459 aa33.64■■■□□ 2.98
SRPK1-210ENST00000508473 AXIN2Q9Y2T1 843 aa33.64■■■□□ 2.98
SRPK1-210ENST00000508473 BRWD3Q6RI45 1802 aa33.64■■■□□ 2.98
SRPK1-210ENST00000508473 COL5A2P05997 1499 aaPredicted RBP33.63■■■□□ 2.97
SRPK1-210ENST00000508473 POLR3GLQ9BT43 218 aa33.62■■■□□ 2.97
SRPK1-210ENST00000508473 NFAT5O94916 1531 aa33.62■■■□□ 2.97
SRPK1-210ENST00000508473 TCP11L2Q8N4U5 519 aa33.58■■■□□ 2.97
SRPK1-210ENST00000508473 COL18A1P39060 1754 aa33.57■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms