RNA–Protein interactions for RNA: ENST00000508434.1

C1QTNF3-204, Transcript of C1q and TNF related 3, humanhuman

TSL 2

Gene C1QTNF3, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-204ENST00000508434 ABCA3Q99758 1704 aa24.24■■□□□ 1.47
C1QTNF3-204ENST00000508434 SRPK2P78362 688 aaKnown RBP24.23■■□□□ 1.47
C1QTNF3-204ENST00000508434 NWD2Q9ULI1 1742 aa24.21■■□□□ 1.47
C1QTNF3-204ENST00000508434 GLI3P10071 1580 aa24.21■■□□□ 1.47
C1QTNF3-204ENST00000508434 ONECUT3O60422 494 aaPredicted RBP24.21■■□□□ 1.47
C1QTNF3-204ENST00000508434 BTG4Q9NY30 223 aa24.2■■□□□ 1.46
C1QTNF3-204ENST00000508434 CCDC9Q9Y3X0 531 aaKnown RBP24.2■■□□□ 1.46
C1QTNF3-204ENST00000508434 CCDC125Q86Z20 511 aa24.19■■□□□ 1.46
C1QTNF3-204ENST00000508434 CABP2Q9NPB3 220 aa24.19■■□□□ 1.46
C1QTNF3-204ENST00000508434 TOPAZ1Q8N9V7 1692 aa24.18■■□□□ 1.46
C1QTNF3-204ENST00000508434 PLCH1Q4KWH8 1693 aa24.18■■□□□ 1.46
C1QTNF3-204ENST00000508434 ROCK2O75116 1388 aaKnown RBP24.17■■□□□ 1.46
C1QTNF3-204ENST00000508434 SEPT12Q8IYM1 358 aa24.17■■□□□ 1.46
C1QTNF3-204ENST00000508434 TRPM1Q7Z4N2 1603 aa24.16■■□□□ 1.46
C1QTNF3-204ENST00000508434 PPIP5K1Q6PFW1 1433 aa24.16■■□□□ 1.46
C1QTNF3-204ENST00000508434 EVC2Q86UK5 1308 aa24.15■■□□□ 1.46
C1QTNF3-204ENST00000508434 TRIM26Q12899 539 aaPredicted RBP24.15■■□□□ 1.46
C1QTNF3-204ENST00000508434 PRDM11Q9NQV5 511 aa24.15■■□□□ 1.46
C1QTNF3-204ENST00000508434 COL14A1Q05707 1796 aaKnown RBP24.15■■□□□ 1.46
C1QTNF3-204ENST00000508434 BRD4O60885 1362 aaPredicted RBP24.15■■□□□ 1.46
C1QTNF3-204ENST00000508434 ABTB2Q8N961 1025 aa24.14■■□□□ 1.45
C1QTNF3-204ENST00000508434 NUTM2GQ5VZR2 741 aa24.13■■□□□ 1.45
C1QTNF3-204ENST00000508434 QRICH2Q9H0J4 1663 aa24.12■■□□□ 1.45
C1QTNF3-204ENST00000508434 CABP1Q9NZU7 370 aa24.12■■□□□ 1.45
C1QTNF3-204ENST00000508434 CRYBG1Q9Y4K1 1723 aa24.12■■□□□ 1.45
C1QTNF3-204ENST00000508434 KIAA0232Q92628 1395 aa24.11■■□□□ 1.45
C1QTNF3-204ENST00000508434 ZC3H6P61129 1189 aaKnown RBP24.1■■□□□ 1.45
C1QTNF3-204ENST00000508434 NLRP13Q86W25 1043 aa24.1■■□□□ 1.45
C1QTNF3-204ENST00000508434 KRT27Q7Z3Y8 459 aa24.09■■□□□ 1.45
C1QTNF3-204ENST00000508434 NRAPQ86VF7 1730 aa24.09■■□□□ 1.45
C1QTNF3-204ENST00000508434 SPATA31A5Q5VU36 1347 aa24.09■■□□□ 1.45
C1QTNF3-204ENST00000508434 SPATA31A7Q8IWB4 1347 aa24.09■■□□□ 1.45
C1QTNF3-204ENST00000508434 FAM98CQ17RN3 349 aaKnown RBP24.08■■□□□ 1.45
C1QTNF3-204ENST00000508434 CHRNA2Q15822 529 aa24.07■■□□□ 1.44
C1QTNF3-204ENST00000508434 USP19O94966 1318 aa24.07■■□□□ 1.44
C1QTNF3-204ENST00000508434 TONSLQ96HA7 1378 aa24.06■■□□□ 1.44
C1QTNF3-204ENST00000508434 BLMP54132 1417 aaPredicted RBP24.05■■□□□ 1.44
C1QTNF3-204ENST00000508434 ZNF692Q9BU19 519 aaPredicted RBP24.05■■□□□ 1.44
C1QTNF3-204ENST00000508434 CARD11Q9BXL7 1154 aa24.05■■□□□ 1.44
C1QTNF3-204ENST00000508434 PHRF1Q9P1Y6 1649 aaKnown RBP24.05■■□□□ 1.44
C1QTNF3-204ENST00000508434 USP6P35125 1406 aa24.04■■□□□ 1.44
C1QTNF3-204ENST00000508434 A0A0G2JS52 829 aa24.04■■□□□ 1.44
C1QTNF3-204ENST00000508434 GCP02774 474 aa24.04■■□□□ 1.44
C1QTNF3-204ENST00000508434 MYT1Q01538 1121 aa24.04■■□□□ 1.44
C1QTNF3-204ENST00000508434 CPDO75976 1380 aa24.03■■□□□ 1.44
C1QTNF3-204ENST00000508434 BRWD3Q6RI45 1802 aa24.02■■□□□ 1.44
C1QTNF3-204ENST00000508434 SPATA31A1Q5TZJ5 1347 aa24.02■■□□□ 1.44
C1QTNF3-204ENST00000508434 EVA1CP58658 441 aa24.01■■□□□ 1.43
C1QTNF3-204ENST00000508434 NLRP6P59044 892 aa24.01■■□□□ 1.43
C1QTNF3-204ENST00000508434 STRN4Q9NRL3 753 aa24.01■■□□□ 1.43
C1QTNF3-204ENST00000508434 SBNO2Q9Y2G9 1366 aa24.01■■□□□ 1.43
C1QTNF3-204ENST00000508434 SSH2Q76I76 1423 aa24.01■■□□□ 1.43
C1QTNF3-204ENST00000508434 SF3B2Q13435 895 aaKnown RBP24■■□□□ 1.43
C1QTNF3-204ENST00000508434 NRKQ7Z2Y5 1582 aa23.99■■□□□ 1.43
C1QTNF3-204ENST00000508434 ZRANB1Q9UGI0 708 aa23.98■■□□□ 1.43
C1QTNF3-204ENST00000508434 TTC21BQ7Z4L5 1316 aa23.96■■□□□ 1.43
C1QTNF3-204ENST00000508434 EP400Q96L91 3159 aa23.95■■□□□ 1.43
C1QTNF3-204ENST00000508434 BARGINQ6ZT62 677 aa23.95■■□□□ 1.42
C1QTNF3-204ENST00000508434 CAMTA1Q9Y6Y1 1673 aa23.95■■□□□ 1.42
C1QTNF3-204ENST00000508434 CPSF1Q10570 1443 aaKnown RBP23.94■■□□□ 1.42
C1QTNF3-204ENST00000508434 TTC21AQ8NDW8 1320 aa23.94■■□□□ 1.42
C1QTNF3-204ENST00000508434 LARP1Q6PKG0 1096 aaKnown RBP23.93■■□□□ 1.42
C1QTNF3-204ENST00000508434 THSD7AQ9UPZ6 1657 aa23.92■■□□□ 1.42
C1QTNF3-204ENST00000508434 DEFB132Q7Z7B7 95 aa23.92■■□□□ 1.42
C1QTNF3-204ENST00000508434 SLIT3O75094 1523 aa23.92■■□□□ 1.42
C1QTNF3-204ENST00000508434 TCP11L2Q8N4U5 519 aa23.91■■□□□ 1.42
C1QTNF3-204ENST00000508434 KCNH5Q8NCM2 988 aa23.91■■□□□ 1.42
C1QTNF3-204ENST00000508434 PUS7Q96PZ0 661 aaKnown RBP23.91■■□□□ 1.42
C1QTNF3-204ENST00000508434 USP35Q9P2H5 1018 aa23.91■■□□□ 1.42
C1QTNF3-204ENST00000508434 THRAP3Q9Y2W1 955 aaKnown RBP23.91■■□□□ 1.42
C1QTNF3-204ENST00000508434 LMO7Q8WWI1 1683 aa23.91■■□□□ 1.42
C1QTNF3-204ENST00000508434 AATKQ6ZMQ8 1374 aa23.91■■□□□ 1.42
C1QTNF3-204ENST00000508434 KTN1Q86UP2 1357 aaKnown RBP23.91■■□□□ 1.42
C1QTNF3-204ENST00000508434 BAG6P46379 1132 aa23.89■■□□□ 1.41
C1QTNF3-204ENST00000508434 SLC24A1O60721 1099 aa23.88■■□□□ 1.41
C1QTNF3-204ENST00000508434 FAM182BQ5T319 152 aa23.88■■□□□ 1.41
C1QTNF3-204ENST00000508434 COL5A2P05997 1499 aaPredicted RBP23.87■■□□□ 1.41
C1QTNF3-204ENST00000508434 PIK3C2AO00443 1686 aa23.87■■□□□ 1.41
C1QTNF3-204ENST00000508434 ZBTB7CA1YPR0 619 aa23.87■■□□□ 1.41
C1QTNF3-204ENST00000508434 AKAP12Q02952 1782 aa23.86■■□□□ 1.41
C1QTNF3-204ENST00000508434 FAM196AQ6ZSG2 479 aa23.86■■□□□ 1.41
C1QTNF3-204ENST00000508434 ARHGEF25Q86VW2 580 aa23.86■■□□□ 1.41
C1QTNF3-204ENST00000508434 TMC1Q8TDI8 760 aa23.86■■□□□ 1.41
C1QTNF3-204ENST00000508434 PDE3BQ13370 1112 aa23.85■■□□□ 1.41
C1QTNF3-204ENST00000508434 HDGFL2Q7Z4V5 671 aaPredicted RBP23.85■■□□□ 1.41
C1QTNF3-204ENST00000508434 CRB1P82279 1406 aa23.84■■□□□ 1.41
C1QTNF3-204ENST00000508434 TESK2Q96S53 571 aa23.83■■□□□ 1.41
C1QTNF3-204ENST00000508434 SLC12A5Q9H2X9 1139 aa23.83■■□□□ 1.41
C1QTNF3-204ENST00000508434 ST20-MTHFSA0A0A6YYL1 179 aa23.82■■□□□ 1.4
C1QTNF3-204ENST00000508434 TERF2IPQ9NYB0 399 aa23.82■■□□□ 1.4
C1QTNF3-204ENST00000508434 AXIN2Q9Y2T1 843 aa23.82■■□□□ 1.4
C1QTNF3-204ENST00000508434 CD163L1Q9NR16 1453 aa23.81■■□□□ 1.4
C1QTNF3-204ENST00000508434 USP31Q70CQ4 1352 aa23.81■■□□□ 1.4
C1QTNF3-204ENST00000508434 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.81■■□□□ 1.4
C1QTNF3-204ENST00000508434 TOM1L2Q6ZVM7 507 aa23.8■■□□□ 1.4
C1QTNF3-204ENST00000508434 SOX12O15370 315 aa23.79■■□□□ 1.4
C1QTNF3-204ENST00000508434 WDR17Q8IZU2 1322 aa23.79■■□□□ 1.4
C1QTNF3-204ENST00000508434 DISP2A7MBM2 1401 aa23.78■■□□□ 1.4
C1QTNF3-204ENST00000508434 EN1Q05925 392 aaPredicted RBP23.78■■□□□ 1.4
C1QTNF3-204ENST00000508434 TIMELESSQ9UNS1 1208 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms