RNA–Protein interactions for RNA: ENST00000508343.1

TRIO-211, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 776 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-211ENST00000508343 ST20-MTHFSA0A0A6YYL1 179 aa21.26■□□□□ 0.99
TRIO-211ENST00000508343 RXRBP28702 533 aa21.26■□□□□ 0.99
TRIO-211ENST00000508343 SLC24A1O60721 1099 aa21.25■□□□□ 0.99
TRIO-211ENST00000508343 ALS2Q96Q42 1657 aa21.24■□□□□ 0.99
TRIO-211ENST00000508343 ATAD2Q6PL18 1390 aa21.24■□□□□ 0.99
TRIO-211ENST00000508343 BRD4O60885 1362 aaPredicted RBP21.23■□□□□ 0.99
TRIO-211ENST00000508343 PUS7Q96PZ0 661 aaKnown RBP21.22■□□□□ 0.99
TRIO-211ENST00000508343 TESK2Q96S53 571 aa21.22■□□□□ 0.99
TRIO-211ENST00000508343 ZNF692Q9BU19 519 aaPredicted RBP21.22■□□□□ 0.99
TRIO-211ENST00000508343 TRPC5Q9UL62 973 aaPredicted RBP21.22■□□□□ 0.99
TRIO-211ENST00000508343 MARF1Q9Y4F3 1742 aaKnown RBP21.21■□□□□ 0.99
TRIO-211ENST00000508343 RBM6P78332 1123 aaKnown RBP21.21■□□□□ 0.99
TRIO-211ENST00000508343 ABTB2Q8N961 1025 aa21.21■□□□□ 0.99
TRIO-211ENST00000508343 USP47Q96K76 1375 aa21.2■□□□□ 0.98
TRIO-211ENST00000508343 BCL9LQ86UU0 1499 aa21.2■□□□□ 0.98
TRIO-211ENST00000508343 FAM83GA6ND36 823 aa21.19■□□□□ 0.98
TRIO-211ENST00000508343 NUTM2GQ5VZR2 741 aa21.19■□□□□ 0.98
TRIO-211ENST00000508343 USP6P35125 1406 aa21.19■□□□□ 0.98
TRIO-211ENST00000508343 UNC5CLQ8IV45 518 aa21.18■□□□□ 0.98
TRIO-211ENST00000508343 SLIT2O94813 1529 aa21.17■□□□□ 0.98
TRIO-211ENST00000508343 ABCA3Q99758 1704 aa21.16■□□□□ 0.98
TRIO-211ENST00000508343 ATRNO75882 1429 aa21.16■□□□□ 0.98
TRIO-211ENST00000508343 NLRP13Q86W25 1043 aa21.16■□□□□ 0.98
TRIO-211ENST00000508343 TMC1Q8TDI8 760 aa21.16■□□□□ 0.98
TRIO-211ENST00000508343 SSH2Q76I76 1423 aa21.15■□□□□ 0.98
TRIO-211ENST00000508343 CDK12Q9NYV4 1490 aaPredicted RBP21.14■□□□□ 0.98
TRIO-211ENST00000508343 CPSF1Q10570 1443 aaKnown RBP21.14■□□□□ 0.98
TRIO-211ENST00000508343 SLC12A5Q9H2X9 1139 aa21.14■□□□□ 0.97
TRIO-211ENST00000508343 TMF1P82094 1093 aa21.13■□□□□ 0.97
TRIO-211ENST00000508343 KTN1Q86UP2 1357 aaKnown RBP21.12■□□□□ 0.97
TRIO-211ENST00000508343 TTC21BQ7Z4L5 1316 aa21.12■□□□□ 0.97
TRIO-211ENST00000508343 NLRP6P59044 892 aa21.12■□□□□ 0.97
TRIO-211ENST00000508343 GJD4Q96KN9 370 aaPredicted RBP21.12■□□□□ 0.97
TRIO-211ENST00000508343 PRDM11Q9NQV5 511 aa21.12■□□□□ 0.97
TRIO-211ENST00000508343 USP19O94966 1318 aa21.11■□□□□ 0.97
TRIO-211ENST00000508343 ZC3H6P61129 1189 aaKnown RBP21.11■□□□□ 0.97
TRIO-211ENST00000508343 HDGFL2Q7Z4V5 671 aaPredicted RBP21.11■□□□□ 0.97
TRIO-211ENST00000508343 BTG4Q9NY30 223 aa21.11■□□□□ 0.97
TRIO-211ENST00000508343 CRYBG1Q9Y4K1 1723 aa21.11■□□□□ 0.97
TRIO-211ENST00000508343 TTC21AQ8NDW8 1320 aa21.1■□□□□ 0.97
TRIO-211ENST00000508343 GCP02774 474 aa21.1■□□□□ 0.97
TRIO-211ENST00000508343 VPS72Q15906 364 aa21.1■□□□□ 0.97
TRIO-211ENST00000508343 TERF2IPQ9NYB0 399 aa21.1■□□□□ 0.97
TRIO-211ENST00000508343 KIAA0232Q92628 1395 aa21.1■□□□□ 0.97
TRIO-211ENST00000508343 AKAP12Q02952 1782 aa21.09■□□□□ 0.97
TRIO-211ENST00000508343 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.09■□□□□ 0.97
TRIO-211ENST00000508343 CDCA8Q53HL2 280 aa21.08■□□□□ 0.97
TRIO-211ENST00000508343 NINLQ9Y2I6 1382 aa21.08■□□□□ 0.96
TRIO-211ENST00000508343 COL14A1Q05707 1796 aaKnown RBP21.08■□□□□ 0.96
TRIO-211ENST00000508343 PHRF1Q9P1Y6 1649 aaKnown RBP21.07■□□□□ 0.96
TRIO-211ENST00000508343 CD163L1Q9NR16 1453 aa21.07■□□□□ 0.96
TRIO-211ENST00000508343 NWD2Q9ULI1 1742 aa21.07■□□□□ 0.96
TRIO-211ENST00000508343 PLCH1Q4KWH8 1693 aa21.06■□□□□ 0.96
TRIO-211ENST00000508343 RGS12O14924 1447 aa21.06■□□□□ 0.96
TRIO-211ENST00000508343 CHRNA2Q15822 529 aa21.06■□□□□ 0.96
TRIO-211ENST00000508343 EIF4G2P78344 907 aaKnown RBP eCLIP21.05■□□□□ 0.96
TRIO-211ENST00000508343 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.05■□□□□ 0.96
TRIO-211ENST00000508343 CCDC9Q9Y3X0 531 aaKnown RBP21.05■□□□□ 0.96
TRIO-211ENST00000508343 CPDO75976 1380 aa21.05■□□□□ 0.96
TRIO-211ENST00000508343 PIK3C2AO00443 1686 aa21.03■□□□□ 0.96
TRIO-211ENST00000508343 A0A1W2PP64 1363 aa21.03■□□□□ 0.96
TRIO-211ENST00000508343 NRKQ7Z2Y5 1582 aa21.02■□□□□ 0.96
TRIO-211ENST00000508343 MON2Q7Z3U7 1717 aa21.02■□□□□ 0.96
TRIO-211ENST00000508343 KCNH5Q8NCM2 988 aa21.02■□□□□ 0.96
TRIO-211ENST00000508343 EDC4Q6P2E9 1401 aaKnown RBP21.02■□□□□ 0.96
TRIO-211ENST00000508343 SLIT3O75094 1523 aa21.01■□□□□ 0.95
TRIO-211ENST00000508343 ONECUT3O60422 494 aaPredicted RBP21■□□□□ 0.95
TRIO-211ENST00000508343 HSPA5P11021 654 aaKnown RBP21■□□□□ 0.95
TRIO-211ENST00000508343 NME9Q86XW9 330 aa21■□□□□ 0.95
TRIO-211ENST00000508343 GLI3P10071 1580 aa21■□□□□ 0.95
TRIO-211ENST00000508343 USP31Q70CQ4 1352 aa20.99■□□□□ 0.95
TRIO-211ENST00000508343 EVA1CP58658 441 aa20.99■□□□□ 0.95
TRIO-211ENST00000508343 STRN4Q9NRL3 753 aa20.99■□□□□ 0.95
TRIO-211ENST00000508343 ZRANB1Q9UGI0 708 aa20.99■□□□□ 0.95
TRIO-211ENST00000508343 NRAPQ86VF7 1730 aa20.98■□□□□ 0.95
TRIO-211ENST00000508343 SPATA31A5Q5VU36 1347 aa20.98■□□□□ 0.95
TRIO-211ENST00000508343 SPATA31A7Q8IWB4 1347 aa20.98■□□□□ 0.95
TRIO-211ENST00000508343 ANKRD36BQ8N2N9 1353 aa20.97■□□□□ 0.95
TRIO-211ENST00000508343 ZBTB7CA1YPR0 619 aa20.97■□□□□ 0.95
TRIO-211ENST00000508343 SEPT12Q8IYM1 358 aa20.97■□□□□ 0.95
TRIO-211ENST00000508343 SOX12O15370 315 aa20.96■□□□□ 0.95
TRIO-211ENST00000508343 ARHGEF25Q86VW2 580 aa20.96■□□□□ 0.95
TRIO-211ENST00000508343 UPF1Q92900 1129 aaKnown RBP eCLIP20.96■□□□□ 0.95
TRIO-211ENST00000508343 AATKQ6ZMQ8 1374 aa20.96■□□□□ 0.95
TRIO-211ENST00000508343 CAMTA1Q9Y6Y1 1673 aa20.96■□□□□ 0.95
TRIO-211ENST00000508343 FAM98CQ17RN3 349 aaKnown RBP20.94■□□□□ 0.94
TRIO-211ENST00000508343 SPATA31A1Q5TZJ5 1347 aa20.94■□□□□ 0.94
TRIO-211ENST00000508343 LMO7Q8WWI1 1683 aa20.93■□□□□ 0.94
TRIO-211ENST00000508343 LARP1Q6PKG0 1096 aaKnown RBP20.92■□□□□ 0.94
TRIO-211ENST00000508343 AXIN2Q9Y2T1 843 aa20.91■□□□□ 0.94
TRIO-211ENST00000508343 NFAT5O94916 1531 aa20.9■□□□□ 0.94
TRIO-211ENST00000508343 A0A0G2JS52 829 aa20.9■□□□□ 0.94
TRIO-211ENST00000508343 MYT1Q01538 1121 aa20.9■□□□□ 0.94
TRIO-211ENST00000508343 COG3Q96JB2 828 aa20.9■□□□□ 0.94
TRIO-211ENST00000508343 POLR3GLQ9BT43 218 aa20.9■□□□□ 0.94
TRIO-211ENST00000508343 USP54Q70EL1 1684 aa20.89■□□□□ 0.94
TRIO-211ENST00000508343 COL5A2P05997 1499 aaPredicted RBP20.89■□□□□ 0.94
TRIO-211ENST00000508343 OVOS2A0A0J9YW53 1432 aa20.89■□□□□ 0.94
TRIO-211ENST00000508343 OVOS2Q6IE36 1432 aa20.89■□□□□ 0.94
TRIO-211ENST00000508343 USP35Q9P2H5 1018 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms