RNA–Protein interactions for RNA: ENST00000507714.1

TRIO-209, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-209ENST00000507714 EDC4Q6P2E9 1401 aaKnown RBP12.3□□□□□ -0.44
TRIO-209ENST00000507714 DIEXFQ68CQ4 756 aaKnown RBP12.3□□□□□ -0.44
TRIO-209ENST00000507714 LMOD2Q6P5Q4 547 aa12.3□□□□□ -0.44
TRIO-209ENST00000507714 KRT28Q7Z3Y7 464 aa12.3□□□□□ -0.44
TRIO-209ENST00000507714 DDX17Q92841 729 aaKnown RBP12.3□□□□□ -0.44
TRIO-209ENST00000507714 MON2Q7Z3U7 1717 aa12.29□□□□□ -0.44
TRIO-209ENST00000507714 NUTM2BA6NNL0 878 aaPredicted RBP12.29□□□□□ -0.44
TRIO-209ENST00000507714 NUTM2EB1AL46 878 aaPredicted RBP12.29□□□□□ -0.44
TRIO-209ENST00000507714 PAK3O75914 559 aaPredicted RBP12.29□□□□□ -0.44
TRIO-209ENST00000507714 NUTM2AQ8IVF1 878 aaPredicted RBP12.29□□□□□ -0.44
TRIO-209ENST00000507714 TTC21AQ8NDW8 1320 aa12.29□□□□□ -0.44
TRIO-209ENST00000507714 USP6P35125 1406 aa12.28□□□□□ -0.44
TRIO-209ENST00000507714 NSD3Q9BZ95 1437 aa12.28□□□□□ -0.44
TRIO-209ENST00000507714 ANP32CO43423 234 aa12.28□□□□□ -0.44
TRIO-209ENST00000507714 XPCQ01831 940 aaPredicted RBP12.28□□□□□ -0.44
TRIO-209ENST00000507714 CARD14Q9BXL6 1004 aa12.28□□□□□ -0.44
TRIO-209ENST00000507714 SOS2Q07890 1332 aaPredicted RBP12.28□□□□□ -0.44
TRIO-209ENST00000507714 SHPRHQ149N8 1683 aa12.28□□□□□ -0.44
TRIO-209ENST00000507714 CD163L1Q9NR16 1453 aa12.27□□□□□ -0.44
TRIO-209ENST00000507714 PER1O15534 1290 aaPredicted RBP12.27□□□□□ -0.45
TRIO-209ENST00000507714 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.27□□□□□ -0.45
TRIO-209ENST00000507714 TTC21BQ7Z4L5 1316 aa12.27□□□□□ -0.45
TRIO-209ENST00000507714 NSD2O96028 1365 aa12.27□□□□□ -0.45
TRIO-209ENST00000507714 MED1Q15648 1581 aaPredicted RBP12.26□□□□□ -0.45
TRIO-209ENST00000507714 ARHGEF10O15013 1369 aa12.26□□□□□ -0.45
TRIO-209ENST00000507714 NPC1L1Q9UHC9 1359 aa12.26□□□□□ -0.45
TRIO-209ENST00000507714 ABTB2Q8N961 1025 aa12.25□□□□□ -0.45
TRIO-209ENST00000507714 SBNO1A3KN83 1393 aa12.25□□□□□ -0.45
TRIO-209ENST00000507714 KIF20BQ96Q89 1820 aa12.25□□□□□ -0.45
TRIO-209ENST00000507714 RALBP1Q15311 655 aa12.24□□□□□ -0.45
TRIO-209ENST00000507714 MORC1Q86VD1 984 aa12.24□□□□□ -0.45
TRIO-209ENST00000507714 NLRP13Q86W25 1043 aa12.24□□□□□ -0.45
TRIO-209ENST00000507714 PNPLA6Q8IY17 1366 aa12.24□□□□□ -0.45
TRIO-209ENST00000507714 COG3Q96JB2 828 aa12.24□□□□□ -0.45
TRIO-209ENST00000507714 PXDNQ92626 1479 aa12.23□□□□□ -0.45
TRIO-209ENST00000507714 TNS3Q68CZ2 1445 aa12.23□□□□□ -0.45
TRIO-209ENST00000507714 SPATA31A3Q5VYP0 1347 aa12.23□□□□□ -0.45
TRIO-209ENST00000507714 FYB1O15117 783 aa12.23□□□□□ -0.45
TRIO-209ENST00000507714 AMER1Q5JTC6 1135 aaPredicted RBP12.23□□□□□ -0.45
TRIO-209ENST00000507714 CC2D1BQ5T0F9 858 aaKnown RBP12.23□□□□□ -0.45
TRIO-209ENST00000507714 SSH2Q76I76 1423 aa12.22□□□□□ -0.45
TRIO-209ENST00000507714 PLEKHG5O94827 1062 aa12.22□□□□□ -0.45
TRIO-209ENST00000507714 NLRP6P59044 892 aa12.22□□□□□ -0.45
TRIO-209ENST00000507714 CNGB1Q14028 1251 aaPredicted RBP12.22□□□□□ -0.45
TRIO-209ENST00000507714 NRKQ7Z2Y5 1582 aa12.22□□□□□ -0.45
TRIO-209ENST00000507714 ANKRD26Q9UPS8 1709 aa12.21□□□□□ -0.45
TRIO-209ENST00000507714 ADAMTS2O95450 1211 aa12.21□□□□□ -0.45
TRIO-209ENST00000507714 ZNF772Q68DY9 489 aaPredicted RBP12.21□□□□□ -0.45
TRIO-209ENST00000507714 NME9Q86XW9 330 aa12.21□□□□□ -0.45
TRIO-209ENST00000507714 NGLY1Q96IV0 654 aa12.21□□□□□ -0.45
TRIO-209ENST00000507714 GGNBP2Q9H3C7 697 aa12.21□□□□□ -0.45
TRIO-209ENST00000507714 TRPM3Q9HCF6 1732 aaPredicted RBP12.2□□□□□ -0.46
TRIO-209ENST00000507714 USP31Q70CQ4 1352 aa12.2□□□□□ -0.46
TRIO-209ENST00000507714 KCNH5Q8NCM2 988 aa12.2□□□□□ -0.46
TRIO-209ENST00000507714 C8orf37Q96NL8 207 aa12.19□□□□□ -0.46
TRIO-209ENST00000507714 PRKRIP1Q9H875 184 aaPredicted RBP12.19□□□□□ -0.46
TRIO-209ENST00000507714 NUTM2GQ5VZR2 741 aa12.18□□□□□ -0.46
TRIO-209ENST00000507714 COL22A1Q8NFW1 1626 aaPredicted RBP12.18□□□□□ -0.46
TRIO-209ENST00000507714 PIK3C2AO00443 1686 aa12.17□□□□□ -0.46
TRIO-209ENST00000507714 ALS2Q96Q42 1657 aa12.17□□□□□ -0.46
TRIO-209ENST00000507714 PARD3Q8TEW0 1356 aa12.17□□□□□ -0.46
TRIO-209ENST00000507714 TNNT2P45379 298 aaPredicted RBP12.16□□□□□ -0.46
TRIO-209ENST00000507714 USP54Q70EL1 1684 aa12.16□□□□□ -0.46
TRIO-209ENST00000507714 MAP2P11137 1827 aaKnown RBP12.16□□□□□ -0.46
TRIO-209ENST00000507714 MYBBP1AQ9BQG0 1328 aaKnown RBP12.15□□□□□ -0.46
TRIO-209ENST00000507714 OVOS2A0A0J9YW53 1432 aa12.15□□□□□ -0.46
TRIO-209ENST00000507714 OVOS2Q6IE36 1432 aa12.15□□□□□ -0.46
TRIO-209ENST00000507714 CFAP53Q96M91 514 aa12.15□□□□□ -0.46
TRIO-209ENST00000507714 ZRANB1Q9UGI0 708 aa12.15□□□□□ -0.46
TRIO-209ENST00000507714 LRP6O75581 1613 aa12.15□□□□□ -0.47
TRIO-209ENST00000507714 AFF2P51816 1311 aa12.14□□□□□ -0.47
TRIO-209ENST00000507714 CABLES1Q8TDN4 633 aa12.14□□□□□ -0.47
TRIO-209ENST00000507714 USP21Q9UK80 565 aa12.14□□□□□ -0.47
TRIO-209ENST00000507714 AATKQ6ZMQ8 1374 aa12.14□□□□□ -0.47
TRIO-209ENST00000507714 USP19O94966 1318 aa12.13□□□□□ -0.47
TRIO-209ENST00000507714 SOX12O15370 315 aa12.13□□□□□ -0.47
TRIO-209ENST00000507714 GCP02774 474 aa12.13□□□□□ -0.47
TRIO-209ENST00000507714 PPP2R1AP30153 589 aa12.13□□□□□ -0.47
TRIO-209ENST00000507714 MARF1Q9Y4F3 1742 aaKnown RBP12.12□□□□□ -0.47
TRIO-209ENST00000507714 PPM1GO15355 546 aaPredicted RBP12.12□□□□□ -0.47
TRIO-209ENST00000507714 AMPHP49418 695 aa12.12□□□□□ -0.47
TRIO-209ENST00000507714 PRDM11Q9NQV5 511 aa12.12□□□□□ -0.47
TRIO-209ENST00000507714 CCDC9Q9Y3X0 531 aaKnown RBP12.12□□□□□ -0.47
TRIO-209ENST00000507714 KIF24Q5T7B8 1368 aa12.11□□□□□ -0.47
TRIO-209ENST00000507714 CCER2I3L3R5 266 aa12.11□□□□□ -0.47
TRIO-209ENST00000507714 MTHFSP49914 203 aa12.11□□□□□ -0.47
TRIO-209ENST00000507714 MIER1Q8N108 512 aa12.11□□□□□ -0.47
TRIO-209ENST00000507714 TRPC5Q9UL62 973 aaPredicted RBP12.11□□□□□ -0.47
TRIO-209ENST00000507714 SLIT3O75094 1523 aa12.11□□□□□ -0.47
TRIO-209ENST00000507714 ZBTB7CA1YPR0 619 aa12.1□□□□□ -0.47
TRIO-209ENST00000507714 RXRBP28702 533 aa12.1□□□□□ -0.47
TRIO-209ENST00000507714 PHRF1Q9P1Y6 1649 aaKnown RBP12.09□□□□□ -0.47
TRIO-209ENST00000507714 ZC3H6P61129 1189 aaKnown RBP12.09□□□□□ -0.47
TRIO-209ENST00000507714 QTRT2Q9H974 415 aaKnown RBP12.09□□□□□ -0.47
TRIO-209ENST00000507714 POLKQ9UBT6 870 aa12.09□□□□□ -0.47
TRIO-209ENST00000507714 NUDCQ9Y266 331 aa12.09□□□□□ -0.47
TRIO-209ENST00000507714 LTN1O94822 1766 aa12.09□□□□□ -0.47
TRIO-209ENST00000507714 ABCA3Q99758 1704 aa12.08□□□□□ -0.47
TRIO-209ENST00000507714 RTL1A6NKG5 1358 aa12.08□□□□□ -0.48
TRIO-209ENST00000507714 EVA1CP58658 441 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms