RNA–Protein interactions for RNA: ENST00000507292.1

SRPK1-208, Transcript of SRSF protein kinase 1, human

TSL 3

Gene SRPK1, Length 634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRPK1-208	ENST00000507292	CSPP1	Q1MSJ5	1256 aa		6.33	□□□□□ -1.4
SRPK1-208	ENST00000507292	DESI1	Q6ICB0	168 aa		6.33	□□□□□ -1.4
SRPK1-208	ENST00000507292	CFAP99	D6REC4	459 aa		6.32	□□□□□ -1.4
SRPK1-208	ENST00000507292	LYPD8	Q6UX82	237 aa		6.32	□□□□□ -1.4
SRPK1-208	ENST00000507292	CABLES1	Q8TDN4	633 aa		6.32	□□□□□ -1.4
SRPK1-208	ENST00000507292	SPTLC1	O15269	473 aa		6.31	□□□□□ -1.4
SRPK1-208	ENST00000507292	WIPF1	O43516	503 aa		6.31	□□□□□ -1.4
SRPK1-208	ENST00000507292	HRC	P23327	699 aa		6.31	□□□□□ -1.4
SRPK1-208	ENST00000507292	VARS	P26640	1264 aa	Known RBP	6.31	□□□□□ -1.4
SRPK1-208	ENST00000507292	INSM1	Q01101	510 aa	Predicted RBP	6.31	□□□□□ -1.4
SRPK1-208	ENST00000507292	DIXDC1	Q155Q3	683 aa		6.31	□□□□□ -1.4
SRPK1-208	ENST00000507292	RIC3	Q7Z5B4	369 aa		6.31	□□□□□ -1.4
SRPK1-208	ENST00000507292	MAP10	Q9P2G4	905 aa		6.31	□□□□□ -1.4
SRPK1-208	ENST00000507292	PLEKHG3	A1L390	1219 aa		6.3	□□□□□ -1.4
SRPK1-208	ENST00000507292	GJA5	P36382	358 aa		6.3	□□□□□ -1.4
SRPK1-208	ENST00000507292	NNT	Q13423	1086 aa		6.3	□□□□□ -1.4
SRPK1-208	ENST00000507292	FOXJ1	Q92949	421 aa		6.3	□□□□□ -1.4
SRPK1-208	ENST00000507292	AK7	Q96M32	723 aa		6.3	□□□□□ -1.4
SRPK1-208	ENST00000507292	ZBTB3	Q9H5J0	574 aa		6.3	□□□□□ -1.4
SRPK1-208	ENST00000507292	VEGFB	P49765	207 aa		6.29	□□□□□ -1.4
SRPK1-208	ENST00000507292	TSC1	Q92574	1164 aa		6.29	□□□□□ -1.4
SRPK1-208	ENST00000507292	PER1	O15534	1290 aa	Predicted RBP	6.28	□□□□□ -1.4
SRPK1-208	ENST00000507292	F12	P00748	615 aa	Predicted RBP	6.28	□□□□□ -1.4
SRPK1-208	ENST00000507292	ARID5B	Q14865	1188 aa		6.28	□□□□□ -1.4
SRPK1-208	ENST00000507292	FAM174A	Q8TBP5	190 aa		6.28	□□□□□ -1.4
SRPK1-208	ENST00000507292	ZFP42	Q96MM3	310 aa		6.28	□□□□□ -1.4
SRPK1-208	ENST00000507292	NXF1	Q9UBU9	619 aa	Known RBP	6.28	□□□□□ -1.4
SRPK1-208	ENST00000507292	LIMD1	Q9UGP4	676 aa		6.28	□□□□□ -1.4
SRPK1-208	ENST00000507292	WDR4	P57081	412 aa	Known RBP	6.27	□□□□□ -1.41
SRPK1-208	ENST00000507292	PRPF38B	Q5VTL8	546 aa	Known RBP	6.27	□□□□□ -1.41
SRPK1-208	ENST00000507292	MPND	Q8N594	471 aa		6.27	□□□□□ -1.41
SRPK1-208	ENST00000507292	SLC16A10	Q8TF71	515 aa		6.27	□□□□□ -1.41
SRPK1-208	ENST00000507292	NUTM2B	A6NNL0	878 aa	Predicted RBP	6.26	□□□□□ -1.41
SRPK1-208	ENST00000507292	NUTM2E	B1AL46	878 aa	Predicted RBP	6.26	□□□□□ -1.41
SRPK1-208	ENST00000507292	ADH1C	P00326	375 aa		6.26	□□□□□ -1.41
SRPK1-208	ENST00000507292	TIMP2	P16035	220 aa		6.26	□□□□□ -1.41
SRPK1-208	ENST00000507292	PDE4D	Q08499	809 aa		6.26	□□□□□ -1.41
SRPK1-208	ENST00000507292	AGER	Q15109	404 aa		6.26	□□□□□ -1.41
SRPK1-208	ENST00000507292	QPCT	Q16769	361 aa		6.26	□□□□□ -1.41
SRPK1-208	ENST00000507292	NUTM2D	Q5VT03	806 aa	Predicted RBP	6.26	□□□□□ -1.41
SRPK1-208	ENST00000507292	MYSM1	Q5VVJ2	828 aa		6.26	□□□□□ -1.41
SRPK1-208	ENST00000507292	NUTM2A	Q8IVF1	878 aa	Predicted RBP	6.26	□□□□□ -1.41
SRPK1-208	ENST00000507292	PURB	Q96QR8	312 aa	Known RBP	6.26	□□□□□ -1.41
SRPK1-208	ENST00000507292	SOBP	A7XYQ1	873 aa		6.25	□□□□□ -1.41
SRPK1-208	ENST00000507292	C4orf48	Q5BLP8	95 aa		6.25	□□□□□ -1.41
SRPK1-208	ENST00000507292	MRPL14	Q6P1L8	145 aa	Known RBP	6.25	□□□□□ -1.41
SRPK1-208	ENST00000507292	NR3C2	P08235	984 aa		6.24	□□□□□ -1.41
SRPK1-208	ENST00000507292	GMPR	P36959	345 aa		6.24	□□□□□ -1.41
SRPK1-208	ENST00000507292	SCARF1	Q14162	830 aa		6.24	□□□□□ -1.41
SRPK1-208	ENST00000507292	CDK15	Q96Q40	435 aa		6.24	□□□□□ -1.41
SRPK1-208	ENST00000507292	KLF16	Q9BXK1	252 aa	Predicted RBP	6.24	□□□□□ -1.41
SRPK1-208	ENST00000507292	ZFAND3	Q9H8U3	227 aa		6.24	□□□□□ -1.41
SRPK1-208	ENST00000507292	SLC24A3	Q9HC58	644 aa		6.24	□□□□□ -1.41
SRPK1-208	ENST00000507292		H3BM21	787 aa		6.23	□□□□□ -1.41
SRPK1-208	ENST00000507292	LILRB3	O75022	631 aa		6.23	□□□□□ -1.41
SRPK1-208	ENST00000507292	ZIC2	O95409	532 aa	Predicted RBP	6.23	□□□□□ -1.41
SRPK1-208	ENST00000507292	RTL5	Q5HYW3	569 aa	Predicted RBP	6.23	□□□□□ -1.41
SRPK1-208	ENST00000507292	BPHL	Q86WA6	291 aa	Predicted RBP	6.23	□□□□□ -1.41
SRPK1-208	ENST00000507292	IRF7	Q92985	503 aa		6.23	□□□□□ -1.41
SRPK1-208	ENST00000507292	ITPKC	Q96DU7	683 aa		6.23	□□□□□ -1.41
SRPK1-208	ENST00000507292	ERBB4	Q15303	1308 aa		6.23	□□□□□ -1.41
SRPK1-208	ENST00000507292	GRM5	P41594	1212 aa		6.22	□□□□□ -1.41
SRPK1-208	ENST00000507292	C6orf118	Q5T5N4	469 aa		6.22	□□□□□ -1.41
SRPK1-208	ENST00000507292	NR5A1	Q13285	461 aa		6.21	□□□□□ -1.42
SRPK1-208	ENST00000507292	NPAS3	Q8IXF0	933 aa		6.21	□□□□□ -1.42
SRPK1-208	ENST00000507292	POLR3E	Q9NVU0	708 aa		6.21	□□□□□ -1.42
SRPK1-208	ENST00000507292	CLK2	P49760	499 aa	Known RBP	6.2	□□□□□ -1.42
SRPK1-208	ENST00000507292	TUSC1	Q2TAM9	212 aa		6.2	□□□□□ -1.42
SRPK1-208	ENST00000507292	HELB	Q8NG08	1087 aa	Predicted RBP	6.2	□□□□□ -1.42
SRPK1-208	ENST00000507292	MAGEB6P1	A0A0J9YX57	407 aa		6.19	□□□□□ -1.42
SRPK1-208	ENST00000507292	ARMC2	Q8NEN0	867 aa		6.19	□□□□□ -1.42
SRPK1-208	ENST00000507292	MAN1A2	O60476	641 aa		6.18	□□□□□ -1.42
SRPK1-208	ENST00000507292	BMP2	P12643	396 aa		6.18	□□□□□ -1.42
SRPK1-208	ENST00000507292	LOR	P23490	312 aa	Predicted RBP	6.18	□□□□□ -1.42
SRPK1-208	ENST00000507292	FSHR	P23945	695 aa		6.18	□□□□□ -1.42
SRPK1-208	ENST00000507292	NBPF14	Q5TI25	921 aa		6.18	□□□□□ -1.42
SRPK1-208	ENST00000507292	VASH1	Q7L8A9	365 aa	Predicted RBP	6.18	□□□□□ -1.42
SRPK1-208	ENST00000507292	SH3RF1	Q7Z6J0	888 aa		6.18	□□□□□ -1.42
SRPK1-208	ENST00000507292	ZSCAN1	Q8NBB4	408 aa		6.18	□□□□□ -1.42
SRPK1-208	ENST00000507292	C1QTNF2	Q9BXJ5	285 aa		6.18	□□□□□ -1.42
SRPK1-208	ENST00000507292	CARD14	Q9BXL6	1004 aa		6.18	□□□□□ -1.42
SRPK1-208	ENST00000507292	CTDSPL2	Q05D32	466 aa		6.17	□□□□□ -1.42
SRPK1-208	ENST00000507292	SH3BP5L	Q7L8J4	393 aa		6.17	□□□□□ -1.42
SRPK1-208	ENST00000507292	FAM181B	A6NEQ2	426 aa		6.16	□□□□□ -1.42
SRPK1-208	ENST00000507292	UPP2	O95045	317 aa		6.16	□□□□□ -1.42
SRPK1-208	ENST00000507292	LINC00528	Q8N1L1	170 aa		6.16	□□□□□ -1.42
SRPK1-208	ENST00000507292	MEIOB	Q8N635	442 aa		6.16	□□□□□ -1.42
SRPK1-208	ENST00000507292	RSPH6A	Q9H0K4	717 aa		6.16	□□□□□ -1.42
SRPK1-208	ENST00000507292	ERFE	Q4G0M1	354 aa		6.15	□□□□□ -1.42
SRPK1-208	ENST00000507292	TRMT44	Q8IYL2	757 aa	Known RBP	6.15	□□□□□ -1.42
SRPK1-208	ENST00000507292	LRRN4	Q8WUT4	740 aa		6.15	□□□□□ -1.42
SRPK1-208	ENST00000507292	MAP4K5	Q9Y4K4	846 aa		6.15	□□□□□ -1.42
SRPK1-208	ENST00000507292	CCDC116	Q8IYX3	515 aa		6.14	□□□□□ -1.43
SRPK1-208	ENST00000507292	ATP1B4	Q9UN42	357 aa	Predicted RBP	6.14	□□□□□ -1.43
SRPK1-208	ENST00000507292	EMILIN1	Q9Y6C2	1016 aa		6.14	□□□□□ -1.43
SRPK1-208	ENST00000507292	PPFIA3	O75145	1194 aa		6.13	□□□□□ -1.43
SRPK1-208	ENST00000507292	FBXO31	Q5XUX0	539 aa	Predicted RBP	6.13	□□□□□ -1.43
SRPK1-208	ENST00000507292	PROCA1	Q8NCQ7	364 aa	Predicted RBP	6.13	□□□□□ -1.43
SRPK1-208	ENST00000507292	DNMT3L	Q9UJW3	386 aa		6.13	□□□□□ -1.43
SRPK1-208	ENST00000507292	SOS2	Q07890	1332 aa	Predicted RBP	6.13	□□□□□ -1.43

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