RNA–Protein interactions for RNA: ENST00000507076.1

CALCOCO2-209, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-209ENST00000507076 MYT1Q01538 1121 aa33.86■■■■□ 3.01
CALCOCO2-209ENST00000507076 KRT27Q7Z3Y8 459 aa33.86■■■■□ 3.01
CALCOCO2-209ENST00000507076 BTG4Q9NY30 223 aa33.83■■■■□ 3.01
CALCOCO2-209ENST00000507076 WASLO00401 505 aaPredicted RBP33.82■■■■□ 3
CALCOCO2-209ENST00000507076 FAM98CQ17RN3 349 aaKnown RBP33.8■■■■□ 3
CALCOCO2-209ENST00000507076 NGDNQ8NEJ9 315 aaKnown RBP33.78■■■■□ 3
CALCOCO2-209ENST00000507076 RGPD1P0DJD0 1748 aa33.76■■■■□ 3
CALCOCO2-209ENST00000507076 PHRF1Q9P1Y6 1649 aaKnown RBP33.76■■■■□ 3
CALCOCO2-209ENST00000507076 PAK3O75914 559 aaPredicted RBP33.76■■■□□ 2.99
CALCOCO2-209ENST00000507076 ATP7BP35670 1465 aa33.76■■■□□ 2.99
CALCOCO2-209ENST00000507076 THSD7AQ9UPZ6 1657 aa33.74■■■□□ 2.99
CALCOCO2-209ENST00000507076 TOPAZ1Q8N9V7 1692 aa33.71■■■□□ 2.99
CALCOCO2-209ENST00000507076 LRP5O75197 1615 aa33.71■■■□□ 2.99
CALCOCO2-209ENST00000507076 STAC3Q96MF2 364 aa33.69■■■□□ 2.98
CALCOCO2-209ENST00000507076 PRDM11Q9NQV5 511 aa33.69■■■□□ 2.98
CALCOCO2-209ENST00000507076 SPATA31A5Q5VU36 1347 aa33.69■■■□□ 2.98
CALCOCO2-209ENST00000507076 SPATA31A7Q8IWB4 1347 aa33.69■■■□□ 2.98
CALCOCO2-209ENST00000507076 TNS1Q9HBL0 1735 aaKnown RBP33.68■■■□□ 2.98
CALCOCO2-209ENST00000507076 BAG6P46379 1132 aa33.68■■■□□ 2.98
CALCOCO2-209ENST00000507076 FAM182BQ5T319 152 aa33.68■■■□□ 2.98
CALCOCO2-209ENST00000507076 NUDT16Q96DE0 195 aaKnown RBP33.67■■■□□ 2.98
CALCOCO2-209ENST00000507076 KIAA1210Q9ULL0 1709 aa33.65■■■□□ 2.98
CALCOCO2-209ENST00000507076 KIAA0232Q92628 1395 aa33.64■■■□□ 2.98
CALCOCO2-209ENST00000507076 PSDA5PKW4 1024 aaPredicted RBP33.63■■■□□ 2.97
CALCOCO2-209ENST00000507076 CHRNA2Q15822 529 aa33.62■■■□□ 2.97
CALCOCO2-209ENST00000507076 NUTM2GQ5VZR2 741 aa33.6■■■□□ 2.97
CALCOCO2-209ENST00000507076 CDK19Q9BWU1 502 aa33.6■■■□□ 2.97
CALCOCO2-209ENST00000507076 EN1Q05925 392 aaPredicted RBP33.59■■■□□ 2.97
CALCOCO2-209ENST00000507076 NRKQ7Z2Y5 1582 aa33.57■■■□□ 2.96
CALCOCO2-209ENST00000507076 ZC3H6P61129 1189 aaKnown RBP33.57■■■□□ 2.96
CALCOCO2-209ENST00000507076 STRN4Q9NRL3 753 aa33.57■■■□□ 2.96
CALCOCO2-209ENST00000507076 SPATA31A1Q5TZJ5 1347 aa33.56■■■□□ 2.96
CALCOCO2-209ENST00000507076 HRCP23327 699 aa33.56■■■□□ 2.96
CALCOCO2-209ENST00000507076 POLR3AO14802 1390 aaPredicted RBP33.55■■■□□ 2.96
CALCOCO2-209ENST00000507076 ACEP12821 1306 aa33.54■■■□□ 2.96
CALCOCO2-209ENST00000507076 DISP2A7MBM2 1401 aa33.51■■■□□ 2.95
CALCOCO2-209ENST00000507076 NBPF8Q3BBV2 869 aa33.5■■■□□ 2.95
CALCOCO2-209ENST00000507076 CCDC61Q9Y6R9 512 aa33.5■■■□□ 2.95
CALCOCO2-209ENST00000507076 USP35Q9P2H5 1018 aa33.49■■■□□ 2.95
CALCOCO2-209ENST00000507076 LMO7Q8WWI1 1683 aa33.48■■■□□ 2.95
CALCOCO2-209ENST00000507076 SSH2Q76I76 1423 aa33.47■■■□□ 2.95
CALCOCO2-209ENST00000507076 QRICH2Q9H0J4 1663 aa33.47■■■□□ 2.95
CALCOCO2-209ENST00000507076 CAMTA1Q9Y6Y1 1673 aa33.47■■■□□ 2.95
CALCOCO2-209ENST00000507076 NBPF1Q3BBV0 1214 aa33.46■■■□□ 2.95
CALCOCO2-209ENST00000507076 PLEKHG3A1L390 1219 aa33.45■■■□□ 2.95
CALCOCO2-209ENST00000507076 TRIM37O94972 964 aa33.45■■■□□ 2.95
CALCOCO2-209ENST00000507076 R3HDM1Q15032 1099 aaKnown RBP33.45■■■□□ 2.95
CALCOCO2-209ENST00000507076 EZH2Q15910 746 aaKnown RBP33.45■■■□□ 2.95
CALCOCO2-209ENST00000507076 ABTB2Q8N961 1025 aa33.45■■■□□ 2.95
CALCOCO2-209ENST00000507076 EVA1CP58658 441 aa33.43■■■□□ 2.94
CALCOCO2-209ENST00000507076 FAM196AQ6ZSG2 479 aa33.42■■■□□ 2.94
CALCOCO2-209ENST00000507076 PPIP5K1Q6PFW1 1433 aa33.42■■■□□ 2.94
CALCOCO2-209ENST00000507076 RREB1Q92766 1687 aa33.41■■■□□ 2.94
CALCOCO2-209ENST00000507076 USP19O94966 1318 aa33.4■■■□□ 2.94
CALCOCO2-209ENST00000507076 SRPK2P78362 688 aaKnown RBP33.4■■■□□ 2.94
CALCOCO2-209ENST00000507076 LARP1Q6PKG0 1096 aaKnown RBP33.39■■■□□ 2.94
CALCOCO2-209ENST00000507076 CPDO75976 1380 aa33.38■■■□□ 2.93
CALCOCO2-209ENST00000507076 NUP188Q5SRE5 1749 aa33.38■■■□□ 2.93
CALCOCO2-209ENST00000507076 BARGINQ6ZT62 677 aa33.37■■■□□ 2.93
CALCOCO2-209ENST00000507076 PARP4Q9UKK3 1724 aaKnown RBP33.36■■■□□ 2.93
CALCOCO2-209ENST00000507076 CENPJQ9HC77 1338 aaPredicted RBP33.36■■■□□ 2.93
CALCOCO2-209ENST00000507076 CAMKK2Q96RR4 588 aa33.36■■■□□ 2.93
CALCOCO2-209ENST00000507076 CABP2Q9NPB3 220 aa33.36■■■□□ 2.93
CALCOCO2-209ENST00000507076 APBA3O96018 575 aa33.35■■■□□ 2.93
CALCOCO2-209ENST00000507076 PDE3BQ13370 1112 aa33.35■■■□□ 2.93
CALCOCO2-209ENST00000507076 NLRP13Q86W25 1043 aa33.33■■■□□ 2.93
CALCOCO2-209ENST00000507076 TCP11L2Q8N4U5 519 aa33.33■■■□□ 2.93
CALCOCO2-209ENST00000507076 COL5A2P05997 1499 aaPredicted RBP33.32■■■□□ 2.92
CALCOCO2-209ENST00000507076 GCP02774 474 aa33.31■■■□□ 2.92
CALCOCO2-209ENST00000507076 PARD3Q8TEW0 1356 aa33.3■■■□□ 2.92
CALCOCO2-209ENST00000507076 ZBTB7CA1YPR0 619 aa33.29■■■□□ 2.92
CALCOCO2-209ENST00000507076 PIK3C2AO00443 1686 aa33.28■■■□□ 2.92
CALCOCO2-209ENST00000507076 USP6P35125 1406 aa33.28■■■□□ 2.92
CALCOCO2-209ENST00000507076 WNK3Q9BYP7 1800 aa33.26■■■□□ 2.92
CALCOCO2-209ENST00000507076 SLIT3O75094 1523 aa33.26■■■□□ 2.91
CALCOCO2-209ENST00000507076 SBF2Q86WG5 1849 aa33.25■■■□□ 2.91
CALCOCO2-209ENST00000507076 LRRC37A3O60309 1634 aa33.25■■■□□ 2.91
CALCOCO2-209ENST00000507076 TRPM1Q7Z4N2 1603 aa33.25■■■□□ 2.91
CALCOCO2-209ENST00000507076 BRD4O60885 1362 aaPredicted RBP33.24■■■□□ 2.91
CALCOCO2-209ENST00000507076 CABP1Q9NZU7 370 aa33.24■■■□□ 2.91
CALCOCO2-209ENST00000507076 THRAP3Q9Y2W1 955 aaKnown RBP33.24■■■□□ 2.91
CALCOCO2-209ENST00000507076 PEAK1Q9H792 1746 aa33.23■■■□□ 2.91
CALCOCO2-209ENST00000507076 CRB1P82279 1406 aa33.23■■■□□ 2.91
CALCOCO2-209ENST00000507076 COL18A1P39060 1754 aa33.23■■■□□ 2.91
CALCOCO2-209ENST00000507076 RGPD5Q99666 1765 aa33.23■■■□□ 2.91
CALCOCO2-209ENST00000507076 AKAP12Q02952 1782 aa33.21■■■□□ 2.91
CALCOCO2-209ENST00000507076 NLRP6P59044 892 aa33.21■■■□□ 2.91
CALCOCO2-209ENST00000507076 AATKQ6ZMQ8 1374 aa33.17■■■□□ 2.9
CALCOCO2-209ENST00000507076 L3MBTL2Q969R5 705 aa33.16■■■□□ 2.9
CALCOCO2-209ENST00000507076 OVOS2A0A0G2JMS6 1433 aa33.15■■■□□ 2.9
CALCOCO2-209ENST00000507076 OVOS2A0A0J9YW53 1432 aa33.15■■■□□ 2.9
CALCOCO2-209ENST00000507076 RGPD3A6NKT7 1758 aaPredicted RBP33.15■■■□□ 2.9
CALCOCO2-209ENST00000507076 OVOS2Q6IE36 1432 aa33.15■■■□□ 2.9
CALCOCO2-209ENST00000507076 RGPD4Q7Z3J3 1758 aa33.15■■■□□ 2.9
CALCOCO2-209ENST00000507076 NBPF14Q5TI25 921 aa33.14■■■□□ 2.9
CALCOCO2-209ENST00000507076 EVC2Q86UK5 1308 aa33.13■■■□□ 2.89
CALCOCO2-209ENST00000507076 TOM1L2Q6ZVM7 507 aa33.11■■■□□ 2.89
CALCOCO2-209ENST00000507076 CPSF1Q10570 1443 aaKnown RBP33.1■■■□□ 2.89
CALCOCO2-209ENST00000507076 DDB1Q16531 1140 aa33.08■■■□□ 2.89
CALCOCO2-209ENST00000507076 SIN3AQ96ST3 1273 aa33.07■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms