RNA–Protein interactions for RNA: ENST00000506706.5

RNF4-207, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 2,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-207ENST00000506706 ITSN1Q15811 1721 aa29.12■■■□□ 2.25
RNF4-207ENST00000506706 PRR36Q9H6K5 1346 aa29.12■■■□□ 2.25
RNF4-207ENST00000506706 NCKAP5LQ9HCH0 1330 aa29.11■■■□□ 2.25
RNF4-207ENST00000506706 SPINK5Q9NQ38 1064 aaPredicted RBP29.11■■■□□ 2.25
RNF4-207ENST00000506706 ZNF692Q9BU19 519 aaPredicted RBP29.11■■■□□ 2.25
RNF4-207ENST00000506706 NKTRP30414 1462 aaKnown RBP29.1■■■□□ 2.25
RNF4-207ENST00000506706 PTCH1Q13635 1447 aa29.1■■■□□ 2.25
RNF4-207ENST00000506706 PNPLA6Q8IY17 1366 aa29.1■■■□□ 2.25
RNF4-207ENST00000506706 NCBP3Q53F19 620 aaKnown RBP29.09■■■□□ 2.25
RNF4-207ENST00000506706 EXOC6Q8TAG9 804 aa29.08■■■□□ 2.25
RNF4-207ENST00000506706 U2SURPO15042 1029 aaKnown RBP29.07■■■□□ 2.24
RNF4-207ENST00000506706 RRP7AQ9Y3A4 280 aaKnown RBP29.07■■■□□ 2.24
RNF4-207ENST00000506706 ADAMTSL3P82987 1691 aa29.07■■■□□ 2.24
RNF4-207ENST00000506706 TOPAZ1Q8N9V7 1692 aa29.06■■■□□ 2.24
RNF4-207ENST00000506706 NEUROD2Q15784 382 aa29.06■■■□□ 2.24
RNF4-207ENST00000506706 CCDC27Q2M243 656 aa29.06■■■□□ 2.24
RNF4-207ENST00000506706 PHF23Q9BUL5 403 aaPredicted RBP29.06■■■□□ 2.24
RNF4-207ENST00000506706 DNAJC5Q9H3Z4 198 aa29.06■■■□□ 2.24
RNF4-207ENST00000506706 DMRT2Q9Y5R5 561 aa29.06■■■□□ 2.24
RNF4-207ENST00000506706 PLIN1O60240 522 aa29.06■■■□□ 2.24
RNF4-207ENST00000506706 DIAPH1O60610 1272 aaKnown RBP29.06■■■□□ 2.24
RNF4-207ENST00000506706 NME9Q86XW9 330 aa29.05■■■□□ 2.24
RNF4-207ENST00000506706 WDR63Q8IWG1 891 aa29.03■■■□□ 2.24
RNF4-207ENST00000506706 POLKQ9UBT6 870 aa29.03■■■□□ 2.24
RNF4-207ENST00000506706 XRN1Q8IZH2 1706 aaKnown RBP29.03■■■□□ 2.24
RNF4-207ENST00000506706 MAP2P11137 1827 aaKnown RBP29.02■■■□□ 2.24
RNF4-207ENST00000506706 PLEKHG3A1L390 1219 aa29.01■■■□□ 2.24
RNF4-207ENST00000506706 COG3Q96JB2 828 aa29.01■■■□□ 2.24
RNF4-207ENST00000506706 ZNF142P52746 1687 aaPredicted RBP29.01■■■□□ 2.24
RNF4-207ENST00000506706 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.01■■■□□ 2.23
RNF4-207ENST00000506706 PLEKHF1Q96S99 279 aa29.01■■■□□ 2.23
RNF4-207ENST00000506706 PIK3R4Q99570 1358 aa29.01■■■□□ 2.23
RNF4-207ENST00000506706 AATKQ6ZMQ8 1374 aa29■■■□□ 2.23
RNF4-207ENST00000506706 PNNQ9H307 717 aaKnown RBP29■■■□□ 2.23
RNF4-207ENST00000506706 ACEP12821 1306 aa28.98■■■□□ 2.23
RNF4-207ENST00000506706 ZRANB1Q9UGI0 708 aa28.98■■■□□ 2.23
RNF4-207ENST00000506706 NUTM2FA1L443 756 aa28.97■■■□□ 2.23
RNF4-207ENST00000506706 PPM1GO15355 546 aaPredicted RBP28.97■■■□□ 2.23
RNF4-207ENST00000506706 FBLN1P23142 703 aa28.97■■■□□ 2.23
RNF4-207ENST00000506706 MAPK8IP3Q9UPT6 1336 aa28.97■■■□□ 2.23
RNF4-207ENST00000506706 ANKLE2Q86XL3 938 aa28.97■■■□□ 2.23
RNF4-207ENST00000506706 NRKQ7Z2Y5 1582 aa28.96■■■□□ 2.23
RNF4-207ENST00000506706 CRBNQ96SW2 442 aa28.95■■■□□ 2.23
RNF4-207ENST00000506706 TTC21BQ7Z4L5 1316 aa28.94■■■□□ 2.22
RNF4-207ENST00000506706 SETD1BQ9UPS6 1966 aaKnown RBP28.93■■■□□ 2.22
RNF4-207ENST00000506706 CDK12Q9NYV4 1490 aaPredicted RBP28.93■■■□□ 2.22
RNF4-207ENST00000506706 USP6P35125 1406 aa28.93■■■□□ 2.22
RNF4-207ENST00000506706 TMPOP42166 694 aaKnown RBP28.92■■■□□ 2.22
RNF4-207ENST00000506706 EMILIN1Q9Y6C2 1016 aa28.92■■■□□ 2.22
RNF4-207ENST00000506706 FCHSD2O94868 740 aa28.92■■■□□ 2.22
RNF4-207ENST00000506706 KCNA6P17658 529 aa28.92■■■□□ 2.22
RNF4-207ENST00000506706 C20orf194Q5TEA3 1177 aa28.9■■■□□ 2.22
RNF4-207ENST00000506706 MYH16Q9H6N6 1097 aa28.89■■■□□ 2.22
RNF4-207ENST00000506706 RBM19Q9Y4C8 960 aaKnown RBP28.88■■■□□ 2.21
RNF4-207ENST00000506706 LRRC7Q96NW7 1537 aa28.87■■■□□ 2.21
RNF4-207ENST00000506706 BCAR3O75815 825 aa28.86■■■□□ 2.21
RNF4-207ENST00000506706 IL13P35225 146 aa28.85■■■□□ 2.21
RNF4-207ENST00000506706 RSPH6AQ9H0K4 717 aa28.85■■■□□ 2.21
RNF4-207ENST00000506706 CHD2O14647 1828 aaKnown RBP28.85■■■□□ 2.21
RNF4-207ENST00000506706 TRIM35Q9UPQ4 493 aa28.85■■■□□ 2.21
RNF4-207ENST00000506706 RGPD8O14715 1765 aaPredicted RBP28.85■■■□□ 2.21
RNF4-207ENST00000506706 OVOS2A0A0J9YW53 1432 aa28.85■■■□□ 2.21
RNF4-207ENST00000506706 OVOS2Q6IE36 1432 aa28.85■■■□□ 2.21
RNF4-207ENST00000506706 SSH2Q76I76 1423 aa28.85■■■□□ 2.21
RNF4-207ENST00000506706 ANKARQ7Z5J8 1434 aa28.85■■■□□ 2.21
RNF4-207ENST00000506706 NEFMP07197 916 aa28.84■■■□□ 2.21
RNF4-207ENST00000506706 RRS1Q15050 365 aaKnown RBP28.84■■■□□ 2.21
RNF4-207ENST00000506706 PMFBP1Q8TBY8 1022 aa28.84■■■□□ 2.21
RNF4-207ENST00000506706 TTC21AQ8NDW8 1320 aa28.83■■■□□ 2.21
RNF4-207ENST00000506706 RIPK4P57078 832 aa28.82■■■□□ 2.2
RNF4-207ENST00000506706 PRKAR2BP31323 418 aa28.82■■■□□ 2.2
RNF4-207ENST00000506706 NGDNQ8NEJ9 315 aaKnown RBP28.81■■■□□ 2.2
RNF4-207ENST00000506706 NALCNQ8IZF0 1738 aa28.81■■■□□ 2.2
RNF4-207ENST00000506706 FMN2Q9NZ56 1722 aa28.81■■■□□ 2.2
RNF4-207ENST00000506706 IL16Q14005 1332 aa28.8■■■□□ 2.2
RNF4-207ENST00000506706 HMOX1P09601 288 aa28.78■■■□□ 2.2
RNF4-207ENST00000506706 RARSP54136 660 aaKnown RBP28.78■■■□□ 2.2
RNF4-207ENST00000506706 USP31Q70CQ4 1352 aa28.77■■■□□ 2.2
RNF4-207ENST00000506706 PDE3AQ14432 1141 aa28.75■■■□□ 2.19
RNF4-207ENST00000506706 NPHP4O75161 1426 aaPredicted RBP28.75■■■□□ 2.19
RNF4-207ENST00000506706 FANCIQ9NVI1 1328 aa28.75■■■□□ 2.19
RNF4-207ENST00000506706 CT47B1P0C2W7 299 aaPredicted RBP28.74■■■□□ 2.19
RNF4-207ENST00000506706 CANXP27824 592 aaKnown RBP28.74■■■□□ 2.19
RNF4-207ENST00000506706 NFE2L2Q16236 605 aa28.73■■■□□ 2.19
RNF4-207ENST00000506706 TSR2Q969E8 191 aaKnown RBP28.71■■■□□ 2.19
RNF4-207ENST00000506706 PHACTR3Q96KR7 559 aa28.71■■■□□ 2.19
RNF4-207ENST00000506706 EIF4A2Q14240 407 aaKnown RBP28.68■■■□□ 2.18
RNF4-207ENST00000506706 PIK3C2AO00443 1686 aa28.68■■■□□ 2.18
RNF4-207ENST00000506706 PEAK1Q9H792 1746 aa28.68■■■□□ 2.18
RNF4-207ENST00000506706 FRAT1Q92837 279 aaPredicted RBP28.67■■■□□ 2.18
RNF4-207ENST00000506706 EXOSC9Q06265 439 aaKnown RBP28.66■■■□□ 2.18
RNF4-207ENST00000506706 ADGRL3Q9HAR2 1447 aa28.65■■■□□ 2.18
RNF4-207ENST00000506706 CALD1Q05682 793 aaKnown RBP28.65■■■□□ 2.18
RNF4-207ENST00000506706 SOX12O15370 315 aa28.63■■■□□ 2.17
RNF4-207ENST00000506706 KDM2BQ8NHM5 1336 aa28.63■■■□□ 2.17
RNF4-207ENST00000506706 BCL2L13Q9BXK5 485 aa28.63■■■□□ 2.17
RNF4-207ENST00000506706 LMOD3Q0VAK6 560 aa28.62■■■□□ 2.17
RNF4-207ENST00000506706 HSP90AB2PQ58FF8 381 aa28.62■■■□□ 2.17
RNF4-207ENST00000506706 CENPQQ7L2Z9 268 aaPredicted RBP28.62■■■□□ 2.17
RNF4-207ENST00000506706 PHF8Q9UPP1 1060 aa28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms