RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 POLR3AO14802 1390 aaPredicted RBP20.71■□□□□ 0.91
CDC42SE2-209ENST00000506419 SRPK2P78362 688 aaKnown RBP20.7■□□□□ 0.9
CDC42SE2-209ENST00000506419 SEPT12Q8IYM1 358 aa20.7■□□□□ 0.9
CDC42SE2-209ENST00000506419 GLI3P10071 1580 aa20.69■□□□□ 0.9
CDC42SE2-209ENST00000506419 CCDC9Q9Y3X0 531 aaKnown RBP20.69■□□□□ 0.9
CDC42SE2-209ENST00000506419 ALS2Q96Q42 1657 aa20.67■□□□□ 0.9
CDC42SE2-209ENST00000506419 CABP1Q9NZU7 370 aa20.67■□□□□ 0.9
CDC42SE2-209ENST00000506419 EP400Q96L91 3159 aa20.67■□□□□ 0.9
CDC42SE2-209ENST00000506419 ZC3H6P61129 1189 aaKnown RBP20.65■□□□□ 0.9
CDC42SE2-209ENST00000506419 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.64■□□□□ 0.9
CDC42SE2-209ENST00000506419 CHRNA2Q15822 529 aa20.64■□□□□ 0.89
CDC42SE2-209ENST00000506419 ABTB2Q8N961 1025 aa20.64■□□□□ 0.89
CDC42SE2-209ENST00000506419 PRDM11Q9NQV5 511 aa20.64■□□□□ 0.89
CDC42SE2-209ENST00000506419 FAM98CQ17RN3 349 aaKnown RBP20.63■□□□□ 0.89
CDC42SE2-209ENST00000506419 ABCA3Q99758 1704 aa20.63■□□□□ 0.89
CDC42SE2-209ENST00000506419 PPIP5K1Q6PFW1 1433 aa20.62■□□□□ 0.89
CDC42SE2-209ENST00000506419 KIAA0232Q92628 1395 aa20.62■□□□□ 0.89
CDC42SE2-209ENST00000506419 CCDC125Q86Z20 511 aa20.62■□□□□ 0.89
CDC42SE2-209ENST00000506419 ROCK2O75116 1388 aaKnown RBP20.61■□□□□ 0.89
CDC42SE2-209ENST00000506419 SPATA31A5Q5VU36 1347 aa20.6■□□□□ 0.89
CDC42SE2-209ENST00000506419 SPATA31A7Q8IWB4 1347 aa20.6■□□□□ 0.89
CDC42SE2-209ENST00000506419 TRIM26Q12899 539 aaPredicted RBP20.6■□□□□ 0.89
CDC42SE2-209ENST00000506419 KRT27Q7Z3Y8 459 aa20.6■□□□□ 0.89
CDC42SE2-209ENST00000506419 EVC2Q86UK5 1308 aa20.59■□□□□ 0.89
CDC42SE2-209ENST00000506419 PLCH1Q4KWH8 1693 aa20.59■□□□□ 0.89
CDC42SE2-209ENST00000506419 NWD2Q9ULI1 1742 aa20.58■□□□□ 0.89
CDC42SE2-209ENST00000506419 TOPAZ1Q8N9V7 1692 aa20.58■□□□□ 0.89
CDC42SE2-209ENST00000506419 GCP02774 474 aa20.57■□□□□ 0.88
CDC42SE2-209ENST00000506419 ITSN1Q15811 1721 aa20.57■□□□□ 0.88
CDC42SE2-209ENST00000506419 NLRP13Q86W25 1043 aa20.57■□□□□ 0.88
CDC42SE2-209ENST00000506419 TRPM1Q7Z4N2 1603 aa20.56■□□□□ 0.88
CDC42SE2-209ENST00000506419 USP19O94966 1318 aa20.56■□□□□ 0.88
CDC42SE2-209ENST00000506419 STRN4Q9NRL3 753 aa20.56■□□□□ 0.88
CDC42SE2-209ENST00000506419 CRYBG1Q9Y4K1 1723 aa20.56■□□□□ 0.88
CDC42SE2-209ENST00000506419 COL14A1Q05707 1796 aaKnown RBP20.55■□□□□ 0.88
CDC42SE2-209ENST00000506419 SPATA31A1Q5TZJ5 1347 aa20.54■□□□□ 0.88
CDC42SE2-209ENST00000506419 A0A0G2JS52 829 aa20.54■□□□□ 0.88
CDC42SE2-209ENST00000506419 MYT1Q01538 1121 aa20.54■□□□□ 0.88
CDC42SE2-209ENST00000506419 DEFB132Q7Z7B7 95 aa20.54■□□□□ 0.88
CDC42SE2-209ENST00000506419 CARD11Q9BXL7 1154 aa20.54■□□□□ 0.88
CDC42SE2-209ENST00000506419 SSH2Q76I76 1423 aa20.53■□□□□ 0.88
CDC42SE2-209ENST00000506419 NRAPQ86VF7 1730 aa20.53■□□□□ 0.88
CDC42SE2-209ENST00000506419 NLRP6P59044 892 aa20.53■□□□□ 0.88
CDC42SE2-209ENST00000506419 FAM182BQ5T319 152 aa20.53■□□□□ 0.88
CDC42SE2-209ENST00000506419 BRD4O60885 1362 aaPredicted RBP20.53■□□□□ 0.88
CDC42SE2-209ENST00000506419 SRCAPQ6ZRS2 3230 aa20.53■□□□□ 0.88
CDC42SE2-209ENST00000506419 USP6P35125 1406 aa20.53■□□□□ 0.88
CDC42SE2-209ENST00000506419 QRICH2Q9H0J4 1663 aa20.52■□□□□ 0.88
CDC42SE2-209ENST00000506419 EVA1CP58658 441 aa20.52■□□□□ 0.88
CDC42SE2-209ENST00000506419 BRWD3Q6RI45 1802 aa20.52■□□□□ 0.88
CDC42SE2-209ENST00000506419 BLMP54132 1417 aaPredicted RBP20.52■□□□□ 0.87
CDC42SE2-209ENST00000506419 CPDO75976 1380 aa20.51■□□□□ 0.87
CDC42SE2-209ENST00000506419 LARP1Q6PKG0 1096 aaKnown RBP20.51■□□□□ 0.87
CDC42SE2-209ENST00000506419 ZNF692Q9BU19 519 aaPredicted RBP20.51■□□□□ 0.87
CDC42SE2-209ENST00000506419 TTC21BQ7Z4L5 1316 aa20.5■□□□□ 0.87
CDC42SE2-209ENST00000506419 TONSLQ96HA7 1378 aa20.49■□□□□ 0.87
CDC42SE2-209ENST00000506419 USP35Q9P2H5 1018 aa20.49■□□□□ 0.87
CDC42SE2-209ENST00000506419 CAMTA1Q9Y6Y1 1673 aa20.48■□□□□ 0.87
CDC42SE2-209ENST00000506419 ZRANB1Q9UGI0 708 aa20.48■□□□□ 0.87
CDC42SE2-209ENST00000506419 PHRF1Q9P1Y6 1649 aaKnown RBP20.47■□□□□ 0.87
CDC42SE2-209ENST00000506419 SF3B2Q13435 895 aaKnown RBP20.46■□□□□ 0.87
CDC42SE2-209ENST00000506419 ZBTB7CA1YPR0 619 aa20.45■□□□□ 0.86
CDC42SE2-209ENST00000506419 BARGINQ6ZT62 677 aa20.45■□□□□ 0.86
CDC42SE2-209ENST00000506419 CPSF1Q10570 1443 aaKnown RBP20.44■□□□□ 0.86
CDC42SE2-209ENST00000506419 NRKQ7Z2Y5 1582 aa20.44■□□□□ 0.86
CDC42SE2-209ENST00000506419 SLC12A5Q9H2X9 1139 aa20.44■□□□□ 0.86
CDC42SE2-209ENST00000506419 AXIN2Q9Y2T1 843 aa20.44■□□□□ 0.86
CDC42SE2-209ENST00000506419 SBNO2Q9Y2G9 1366 aa20.44■□□□□ 0.86
CDC42SE2-209ENST00000506419 TCP11L2Q8N4U5 519 aa20.43■□□□□ 0.86
CDC42SE2-209ENST00000506419 AATKQ6ZMQ8 1374 aa20.42■□□□□ 0.86
CDC42SE2-209ENST00000506419 ARHGEF25Q86VW2 580 aa20.41■□□□□ 0.86
CDC42SE2-209ENST00000506419 TMC1Q8TDI8 760 aa20.41■□□□□ 0.86
CDC42SE2-209ENST00000506419 KTN1Q86UP2 1357 aaKnown RBP20.41■□□□□ 0.86
CDC42SE2-209ENST00000506419 ST20-MTHFSA0A0A6YYL1 179 aa20.4■□□□□ 0.86
CDC42SE2-209ENST00000506419 TTC21AQ8NDW8 1320 aa20.4■□□□□ 0.86
CDC42SE2-209ENST00000506419 TESK2Q96S53 571 aa20.4■□□□□ 0.86
CDC42SE2-209ENST00000506419 LMO7Q8WWI1 1683 aa20.39■□□□□ 0.86
CDC42SE2-209ENST00000506419 THSD7AQ9UPZ6 1657 aa20.39■□□□□ 0.86
CDC42SE2-209ENST00000506419 SLIT3O75094 1523 aa20.39■□□□□ 0.85
CDC42SE2-209ENST00000506419 SOX12O15370 315 aa20.39■□□□□ 0.85
CDC42SE2-209ENST00000506419 EN1Q05925 392 aaPredicted RBP20.39■□□□□ 0.85
CDC42SE2-209ENST00000506419 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.39■□□□□ 0.85
CDC42SE2-209ENST00000506419 THRAP3Q9Y2W1 955 aaKnown RBP20.39■□□□□ 0.85
CDC42SE2-209ENST00000506419 BAG6P46379 1132 aa20.38■□□□□ 0.85
CDC42SE2-209ENST00000506419 FAM196AQ6ZSG2 479 aa20.38■□□□□ 0.85
CDC42SE2-209ENST00000506419 KCNH5Q8NCM2 988 aa20.38■□□□□ 0.85
CDC42SE2-209ENST00000506419 PUS7Q96PZ0 661 aaKnown RBP20.38■□□□□ 0.85
CDC42SE2-209ENST00000506419 COL5A2P05997 1499 aaPredicted RBP20.37■□□□□ 0.85
CDC42SE2-209ENST00000506419 TRIM37O94972 964 aa20.37■□□□□ 0.85
CDC42SE2-209ENST00000506419 PDE3BQ13370 1112 aa20.37■□□□□ 0.85
CDC42SE2-209ENST00000506419 NME9Q86XW9 330 aa20.37■□□□□ 0.85
CDC42SE2-209ENST00000506419 CD163L1Q9NR16 1453 aa20.37■□□□□ 0.85
CDC42SE2-209ENST00000506419 PIK3C2AO00443 1686 aa20.36■□□□□ 0.85
CDC42SE2-209ENST00000506419 TOM1L2Q6ZVM7 507 aa20.34■□□□□ 0.85
CDC42SE2-209ENST00000506419 CRB1P82279 1406 aa20.34■□□□□ 0.85
CDC42SE2-209ENST00000506419 USP31Q70CQ4 1352 aa20.34■□□□□ 0.85
CDC42SE2-209ENST00000506419 EZH2Q15910 746 aaKnown RBP20.33■□□□□ 0.85
CDC42SE2-209ENST00000506419 HDGFL2Q7Z4V5 671 aaPredicted RBP20.33■□□□□ 0.85
CDC42SE2-209ENST00000506419 CAMKK2Q96RR4 588 aa20.32■□□□□ 0.84
CDC42SE2-209ENST00000506419 WDR17Q8IZU2 1322 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms