RNA–Protein interactions for RNA: ENST00000506312.3

RACK1-213, Transcript of receptor for activated C kinase 1, humanhuman

TSL 5

Gene RACK1, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-213ENST00000506312 ARHGEF10O15013 1369 aa12.4□□□□□ -0.42
RACK1-213ENST00000506312 COL14A1Q05707 1796 aaKnown RBP12.39□□□□□ -0.43
RACK1-213ENST00000506312 WAPLQ7Z5K2 1190 aa12.39□□□□□ -0.43
RACK1-213ENST00000506312 ZNF526Q8TF50 670 aaPredicted RBP12.39□□□□□ -0.43
RACK1-213ENST00000506312 SPATA31A1Q5TZJ5 1347 aa12.38□□□□□ -0.43
RACK1-213ENST00000506312 TECPR2O15040 1411 aa12.38□□□□□ -0.43
RACK1-213ENST00000506312 TNS4Q8IZW8 715 aa12.38□□□□□ -0.43
RACK1-213ENST00000506312 PRDM11Q9NQV5 511 aa12.38□□□□□ -0.43
RACK1-213ENST00000506312 STK26Q9P289 416 aa12.38□□□□□ -0.43
RACK1-213ENST00000506312 ATP10DQ9P241 1426 aa12.37□□□□□ -0.43
RACK1-213ENST00000506312 ARXQ96QS3 562 aa12.37□□□□□ -0.43
RACK1-213ENST00000506312 PHF8Q9UPP1 1060 aa12.37□□□□□ -0.43
RACK1-213ENST00000506312 RRBP1Q9P2E9 1410 aaKnown RBP12.37□□□□□ -0.43
RACK1-213ENST00000506312 PRELPP51888 382 aa12.36□□□□□ -0.43
RACK1-213ENST00000506312 GPBP1L1Q9HC44 474 aaPredicted RBP12.36□□□□□ -0.43
RACK1-213ENST00000506312 SBNO1A3KN83 1393 aa12.35□□□□□ -0.43
RACK1-213ENST00000506312 CHRNA2Q15822 529 aa12.35□□□□□ -0.43
RACK1-213ENST00000506312 MTFR1LQ9H019 292 aa12.35□□□□□ -0.43
RACK1-213ENST00000506312 PLEKHH1Q9ULM0 1364 aa12.34□□□□□ -0.43
RACK1-213ENST00000506312 STK32BQ9NY57 414 aa12.34□□□□□ -0.43
RACK1-213ENST00000506312 PRAG1Q86YV5 1406 aa12.34□□□□□ -0.43
RACK1-213ENST00000506312 FMN2Q9NZ56 1722 aa12.34□□□□□ -0.43
RACK1-213ENST00000506312 NUP155O75694 1391 aa12.33□□□□□ -0.44
RACK1-213ENST00000506312 FAM50AQ14320 339 aaKnown RBP12.33□□□□□ -0.44
RACK1-213ENST00000506312 PTF1AQ7RTS3 328 aa12.32□□□□□ -0.44
RACK1-213ENST00000506312 PMFBP1Q8TBY8 1022 aa12.32□□□□□ -0.44
RACK1-213ENST00000506312 SGIP1Q9BQI5 828 aa12.32□□□□□ -0.44
RACK1-213ENST00000506312 GOLGB1Q14789 3259 aaKnown RBP12.31□□□□□ -0.44
RACK1-213ENST00000506312 CLTCL1P53675 1640 aa12.3□□□□□ -0.44
RACK1-213ENST00000506312 VGFO15240 615 aaPredicted RBP12.3□□□□□ -0.44
RACK1-213ENST00000506312 RGPD8O14715 1765 aaPredicted RBP12.3□□□□□ -0.44
RACK1-213ENST00000506312 NRXN1Q9ULB1 1477 aa12.29□□□□□ -0.44
RACK1-213ENST00000506312 EVA1CP58658 441 aa12.29□□□□□ -0.44
RACK1-213ENST00000506312 SLC15A2Q16348 729 aa12.29□□□□□ -0.44
RACK1-213ENST00000506312 KIAA0232Q92628 1395 aa12.29□□□□□ -0.44
RACK1-213ENST00000506312 MAP3K5Q99683 1374 aa12.29□□□□□ -0.44
RACK1-213ENST00000506312 PLSCR1O15162 318 aa12.28□□□□□ -0.44
RACK1-213ENST00000506312 PROM2Q8N271 834 aa12.28□□□□□ -0.44
RACK1-213ENST00000506312 NLGN2Q8NFZ4 835 aa12.28□□□□□ -0.44
RACK1-213ENST00000506312 PAK3O75914 559 aaPredicted RBP12.27□□□□□ -0.45
RACK1-213ENST00000506312 YBX3P16989 372 aaKnown RBP eCLIP12.27□□□□□ -0.457e-61■□□□□ 10.4
RACK1-213ENST00000506312 APLP1P51693 650 aa12.27□□□□□ -0.45
RACK1-213ENST00000506312 VPS8Q8N3P4 1428 aa12.27□□□□□ -0.45
RACK1-213ENST00000506312 RGPD3A6NKT7 1758 aaPredicted RBP12.26□□□□□ -0.45
RACK1-213ENST00000506312 RGPD4Q7Z3J3 1758 aa12.26□□□□□ -0.45
RACK1-213ENST00000506312 ZC3H6P61129 1189 aaKnown RBP12.26□□□□□ -0.45
RACK1-213ENST00000506312 LARP1Q6PKG0 1096 aaKnown RBP12.26□□□□□ -0.45
RACK1-213ENST00000506312 BARGINQ6ZT62 677 aa12.26□□□□□ -0.45
RACK1-213ENST00000506312 OVOS2A0A0G2JMS6 1433 aa12.26□□□□□ -0.45
RACK1-213ENST00000506312 OVOS2A0A0J9YW53 1432 aa12.26□□□□□ -0.45
RACK1-213ENST00000506312 OVOS2Q6IE36 1432 aa12.26□□□□□ -0.45
RACK1-213ENST00000506312 TXNRD1Q16881 649 aa12.25□□□□□ -0.45
RACK1-213ENST00000506312 TCP11L2Q8N4U5 519 aa12.25□□□□□ -0.45
RACK1-213ENST00000506312 SSH2Q76I76 1423 aa12.25□□□□□ -0.45
RACK1-213ENST00000506312 SAFB2Q14151 953 aaKnown RBP eCLIP12.24□□□□□ -0.45
RACK1-213ENST00000506312 TMEM132EQ6IEE7 984 aa12.24□□□□□ -0.45
RACK1-213ENST00000506312 DNAJC5GQ8N7S2 189 aa12.24□□□□□ -0.45
RACK1-213ENST00000506312 IFT172Q9UG01 1749 aa12.24□□□□□ -0.45
RACK1-213ENST00000506312 GRIN3BO60391 1043 aa12.23□□□□□ -0.45
RACK1-213ENST00000506312 TRPM3Q9HCF6 1732 aaPredicted RBP12.23□□□□□ -0.45
RACK1-213ENST00000506312 GPRASP1Q5JY77 1395 aa12.22□□□□□ -0.45
RACK1-213ENST00000506312 HTRA3P83110 453 aa12.22□□□□□ -0.45
RACK1-213ENST00000506312 WWC3Q9ULE0 1092 aa12.22□□□□□ -0.45
RACK1-213ENST00000506312 KIF1BO60333 1816 aa12.22□□□□□ -0.45
RACK1-213ENST00000506312 ALS2Q96Q42 1657 aa12.22□□□□□ -0.45
RACK1-213ENST00000506312 NUTM2GQ5VZR2 741 aa12.21□□□□□ -0.45
RACK1-213ENST00000506312 PCDH10Q9P2E7 1040 aa12.21□□□□□ -0.45
RACK1-213ENST00000506312 CRYBG1Q9Y4K1 1723 aa12.2□□□□□ -0.46
RACK1-213ENST00000506312 POLD1P28340 1107 aa12.2□□□□□ -0.46
RACK1-213ENST00000506312 PEAK1Q9H792 1746 aa12.2□□□□□ -0.46
RACK1-213ENST00000506312 ACIN1Q9UKV3 1341 aaKnown RBP12.18□□□□□ -0.46
RACK1-213ENST00000506312 C11orf95C9JLR9 678 aaPredicted RBP12.18□□□□□ -0.46
RACK1-213ENST00000506312 KIF3CO14782 793 aa12.18□□□□□ -0.46
RACK1-213ENST00000506312 SBF2Q86WG5 1849 aa12.18□□□□□ -0.46
RACK1-213ENST00000506312 ADCY9O60503 1353 aa12.18□□□□□ -0.46
RACK1-213ENST00000506312 PARP4Q9UKK3 1724 aaKnown RBP12.17□□□□□ -0.46
RACK1-213ENST00000506312 ADGRF5Q8IZF2 1346 aa12.17□□□□□ -0.46
RACK1-213ENST00000506312 DDB1Q16531 1140 aa12.17□□□□□ -0.46
RACK1-213ENST00000506312 DHX57Q6P158 1386 aaKnown RBP12.17□□□□□ -0.46
RACK1-213ENST00000506312 ABCC11Q96J66 1382 aa12.17□□□□□ -0.46
RACK1-213ENST00000506312 ATP7BP35670 1465 aa12.16□□□□□ -0.46
RACK1-213ENST00000506312 PPLO60437 1756 aa12.16□□□□□ -0.46
RACK1-213ENST00000506312 ZBTB7CA1YPR0 619 aa12.16□□□□□ -0.46
RACK1-213ENST00000506312 APLP2Q06481 763 aa12.16□□□□□ -0.46
RACK1-213ENST00000506312 ZNF827Q17R98 1081 aa12.16□□□□□ -0.46
RACK1-213ENST00000506312 KLRG1Q96E93 195 aa12.16□□□□□ -0.46
RACK1-213ENST00000506312 TOPAZ1Q8N9V7 1692 aa12.16□□□□□ -0.46
RACK1-213ENST00000506312 LRRC37A3O60309 1634 aa12.15□□□□□ -0.46
RACK1-213ENST00000506312 RPGRIP1LQ68CZ1 1315 aa12.15□□□□□ -0.46
RACK1-213ENST00000506312 KNDC1Q76NI1 1749 aa12.15□□□□□ -0.46
RACK1-213ENST00000506312 NGDNQ8NEJ9 315 aaKnown RBP12.15□□□□□ -0.46
RACK1-213ENST00000506312 PHRF1Q9P1Y6 1649 aaKnown RBP12.15□□□□□ -0.47
RACK1-213ENST00000506312 YTHDC2Q9H6S0 1430 aaKnown RBP12.14□□□□□ -0.47
RACK1-213ENST00000506312 ITGAEP38570 1179 aa12.14□□□□□ -0.47
RACK1-213ENST00000506312 HIRIP3Q9BW71 556 aaPredicted RBP12.14□□□□□ -0.47
RACK1-213ENST00000506312 THRAP3Q9Y2W1 955 aaKnown RBP12.14□□□□□ -0.47
RACK1-213ENST00000506312 MARCH10Q8NA82 808 aaPredicted RBP12.13□□□□□ -0.47
RACK1-213ENST00000506312 WDR90Q96KV7 1748 aa12.13□□□□□ -0.47
RACK1-213ENST00000506312 JMYQ8N9B5 988 aa12.12□□□□□ -0.47
RACK1-213ENST00000506312 PRAM1Q96QH2 718 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms