RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 CFAP53Q96M91 514 aa17.74■□□□□ 0.43
LMNA-220ENST00000504687 ADAMTS8Q9UP79 889 aa17.74■□□□□ 0.43
LMNA-220ENST00000504687 NCBP3Q53F19 620 aaKnown RBP17.73■□□□□ 0.43
LMNA-220ENST00000504687 MTHFSP49914 203 aa17.72■□□□□ 0.43
LMNA-220ENST00000504687 ACEP12821 1306 aa17.72■□□□□ 0.43
LMNA-220ENST00000504687 TTC21AQ8NDW8 1320 aa17.72■□□□□ 0.43
LMNA-220ENST00000504687 GGNBP2Q9H3C7 697 aa17.71■□□□□ 0.43
LMNA-220ENST00000504687 MAP2P11137 1827 aaKnown RBP17.7■□□□□ 0.42
LMNA-220ENST00000504687 OVOS2A0A0J9YW53 1432 aa17.7■□□□□ 0.42
LMNA-220ENST00000504687 OVOS2Q6IE36 1432 aa17.7■□□□□ 0.42
LMNA-220ENST00000504687 TTC21BQ7Z4L5 1316 aa17.69■□□□□ 0.42
LMNA-220ENST00000504687 CDK12Q9NYV4 1490 aaPredicted RBP17.69■□□□□ 0.42
LMNA-220ENST00000504687 USP31Q70CQ4 1352 aa17.68■□□□□ 0.42
LMNA-220ENST00000504687 DCCP43146 1447 aa17.68■□□□□ 0.42
LMNA-220ENST00000504687 STRCP1A6NGW2 1772 aa17.67■□□□□ 0.42
LMNA-220ENST00000504687 NUDCQ9Y266 331 aa17.67■□□□□ 0.42
LMNA-220ENST00000504687 KIF1AQ12756 1690 aa17.65■□□□□ 0.42
LMNA-220ENST00000504687 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.65■□□□□ 0.42
LMNA-220ENST00000504687 COG3Q96JB2 828 aa17.65■□□□□ 0.42
LMNA-220ENST00000504687 DMRT2Q9Y5R5 561 aa17.65■□□□□ 0.42
LMNA-220ENST00000504687 ZNF521Q96K83 1311 aa17.65■□□□□ 0.42
LMNA-220ENST00000504687 PIK3C2AO00443 1686 aa17.64■□□□□ 0.42
LMNA-220ENST00000504687 IQSEC2Q5JU85 1478 aa17.64■□□□□ 0.41
LMNA-220ENST00000504687 TNNT2P45379 298 aaPredicted RBP17.63■□□□□ 0.41
LMNA-220ENST00000504687 NME9Q86XW9 330 aa17.63■□□□□ 0.41
LMNA-220ENST00000504687 POLKQ9UBT6 870 aa17.63■□□□□ 0.41
LMNA-220ENST00000504687 MARF1Q9Y4F3 1742 aaKnown RBP17.62■□□□□ 0.41
LMNA-220ENST00000504687 RUNDC1Q96C34 613 aa17.61■□□□□ 0.41
LMNA-220ENST00000504687 NGDNQ8NEJ9 315 aaKnown RBP17.6■□□□□ 0.41
LMNA-220ENST00000504687 C19orf44Q9H6X5 657 aa17.6■□□□□ 0.41
LMNA-220ENST00000504687 RNF123Q5XPI4 1314 aa17.6■□□□□ 0.41
LMNA-220ENST00000504687 KIF24Q5T7B8 1368 aa17.59■□□□□ 0.41
LMNA-220ENST00000504687 CCDC27Q2M243 656 aa17.59■□□□□ 0.41
LMNA-220ENST00000504687 PROSER2Q86WR7 435 aaPredicted RBP17.59■□□□□ 0.41
LMNA-220ENST00000504687 PHF23Q9BUL5 403 aaPredicted RBP17.59■□□□□ 0.41
LMNA-220ENST00000504687 PNNQ9H307 717 aaKnown RBP17.59■□□□□ 0.41
LMNA-220ENST00000504687 PHF8Q9UPP1 1060 aa17.59■□□□□ 0.41
LMNA-220ENST00000504687 MST1RQ04912 1400 aa17.58■□□□□ 0.41
LMNA-220ENST00000504687 DIAPH1O60610 1272 aaKnown RBP17.58■□□□□ 0.4
LMNA-220ENST00000504687 ERICH6BQ5W0A0 696 aa17.58■□□□□ 0.4
LMNA-220ENST00000504687 XIRP1Q702N8 1843 aaKnown RBP17.58■□□□□ 0.4
LMNA-220ENST00000504687 NUTM2FA1L443 756 aa17.57■□□□□ 0.4
LMNA-220ENST00000504687 PMFBP1Q8TBY8 1022 aa17.56■□□□□ 0.4
LMNA-220ENST00000504687 TRPM3Q9HCF6 1732 aaPredicted RBP17.55■□□□□ 0.4
LMNA-220ENST00000504687 PHRF1Q9P1Y6 1649 aaKnown RBP17.55■□□□□ 0.4
LMNA-220ENST00000504687 APAF1O14727 1248 aa17.55■□□□□ 0.4
LMNA-220ENST00000504687 NEFLP07196 543 aa17.55■□□□□ 0.4
LMNA-220ENST00000504687 TRMT2AQ8IZ69 625 aaKnown RBP17.55■□□□□ 0.4
LMNA-220ENST00000504687 C1orf167Q5SNV9 1468 aa17.55■□□□□ 0.4
LMNA-220ENST00000504687 RGPD1P0DJD0 1748 aa17.55■□□□□ 0.4
LMNA-220ENST00000504687 TMEM94Q12767 1356 aa17.54■□□□□ 0.4
LMNA-220ENST00000504687 ZNF335Q9H4Z2 1342 aaPredicted RBP17.54■□□□□ 0.4
LMNA-220ENST00000504687 FCHSD2O94868 740 aa17.54■□□□□ 0.4
LMNA-220ENST00000504687 PLEKHF1Q96S99 279 aa17.54■□□□□ 0.4
LMNA-220ENST00000504687 ZRANB1Q9UGI0 708 aa17.54■□□□□ 0.4
LMNA-220ENST00000504687 PEAK1Q9H792 1746 aa17.54■□□□□ 0.4
LMNA-220ENST00000504687 GOLGA2Q08379 1002 aa17.53■□□□□ 0.4
LMNA-220ENST00000504687 SUPT16HQ9Y5B9 1047 aaKnown RBP17.53■□□□□ 0.4
LMNA-220ENST00000504687 U2AF1L5P0DN76 240 aaPredicted RBP17.52■□□□□ 0.4
LMNA-220ENST00000504687 IL13P35225 146 aa17.52■□□□□ 0.4
LMNA-220ENST00000504687 U2AF1Q01081 240 aaKnown RBP eCLIP17.52■□□□□ 0.4
LMNA-220ENST00000504687 LTBP4Q8N2S1 1624 aa17.51■□□□□ 0.39
LMNA-220ENST00000504687 CCDC146Q8IYE0 955 aa17.51■□□□□ 0.39
LMNA-220ENST00000504687 TCP11L2Q8N4U5 519 aa17.51■□□□□ 0.39
LMNA-220ENST00000504687 EMILIN1Q9Y6C2 1016 aa17.51■□□□□ 0.39
LMNA-220ENST00000504687 SBNO1A3KN83 1393 aa17.51■□□□□ 0.39
LMNA-220ENST00000504687 SLFN5Q08AF3 891 aa17.5■□□□□ 0.39
LMNA-220ENST00000504687 C14orf37Q86TY3 774 aa17.5■□□□□ 0.39
LMNA-220ENST00000504687 WDR63Q8IWG1 891 aa17.5■□□□□ 0.39
LMNA-220ENST00000504687 SLIT3O75094 1523 aa17.49■□□□□ 0.39
LMNA-220ENST00000504687 E9PSI1 815 aa17.49■□□□□ 0.39
LMNA-220ENST00000504687 ESCO1Q5FWF5 840 aa17.49■□□□□ 0.39
LMNA-220ENST00000504687 CADPS2Q86UW7 1296 aa17.49■□□□□ 0.39
LMNA-220ENST00000504687 WWC1Q8IX03 1113 aa17.49■□□□□ 0.39
LMNA-220ENST00000504687 ALS2Q96Q42 1657 aa17.48■□□□□ 0.39
LMNA-220ENST00000504687 DUSP27Q5VZP5 1158 aa17.48■□□□□ 0.39
LMNA-220ENST00000504687 CDCA7LQ96GN5 454 aa17.48■□□□□ 0.39
LMNA-220ENST00000504687 RTL1A6NKG5 1358 aa17.48■□□□□ 0.39
LMNA-220ENST00000504687 FLT4P35916 1363 aa17.48■□□□□ 0.39
LMNA-220ENST00000504687 MSH6P52701 1360 aa17.48■□□□□ 0.39
LMNA-220ENST00000504687 NFAT5O94916 1531 aa17.47■□□□□ 0.39
LMNA-220ENST00000504687 ATF3P18847 181 aa17.47■□□□□ 0.39
LMNA-220ENST00000504687 RSPH6AQ9H0K4 717 aa17.47■□□□□ 0.39
LMNA-220ENST00000504687 U2SURPO15042 1029 aaKnown RBP17.46■□□□□ 0.39
LMNA-220ENST00000504687 FKBP8Q14318 412 aa17.46■□□□□ 0.39
LMNA-220ENST00000504687 RRS1Q15050 365 aaKnown RBP17.46■□□□□ 0.39
LMNA-220ENST00000504687 RBM33Q96EV2 1170 aaKnown RBP17.46■□□□□ 0.39
LMNA-220ENST00000504687 SALL2Q9Y467 1007 aaPredicted RBP17.46■□□□□ 0.39
LMNA-220ENST00000504687 FBLN1P23142 703 aa17.45■□□□□ 0.38
LMNA-220ENST00000504687 NLRP6P59044 892 aa17.45■□□□□ 0.38
LMNA-220ENST00000504687 PSME1Q06323 249 aa17.45■□□□□ 0.38
LMNA-220ENST00000504687 ABTB2Q8N961 1025 aa17.45■□□□□ 0.38
LMNA-220ENST00000504687 RCAN3Q9UKA8 241 aa17.45■□□□□ 0.38
LMNA-220ENST00000504687 LTN1O94822 1766 aa17.45■□□□□ 0.38
LMNA-220ENST00000504687 IL16Q14005 1332 aa17.45■□□□□ 0.38
LMNA-220ENST00000504687 MAP3K19Q56UN5 1328 aa17.45■□□□□ 0.38
LMNA-220ENST00000504687 TMPOP42166 694 aaKnown RBP17.44■□□□□ 0.38
LMNA-220ENST00000504687 ORAI2Q96SN7 254 aa17.44■□□□□ 0.38
LMNA-220ENST00000504687 MAPK8IP3Q9UPT6 1336 aa17.44■□□□□ 0.38
LMNA-220ENST00000504687 ARHGEF10O15013 1369 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms