RNA–Protein interactions for RNA: ENST00000504211.5

UBE2D3-217, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-217ENST00000504211 A6NJR5 290 aa12.18□□□□□ -0.46
UBE2D3-217ENST00000504211 RPIAP49247 311 aa12.18□□□□□ -0.46
UBE2D3-217ENST00000504211 GDPD2Q9HCC8 539 aa12.18□□□□□ -0.46
UBE2D3-217ENST00000504211 RAD21O60216 631 aa12.17□□□□□ -0.46
UBE2D3-217ENST00000504211 GPKOWQ92917 476 aaPredicted RBP eCLIP12.17□□□□□ -0.46
UBE2D3-217ENST00000504211 EMID1Q96A84 441 aaPredicted RBP12.17□□□□□ -0.46
UBE2D3-217ENST00000504211 TIMELESSQ9UNS1 1208 aa12.17□□□□□ -0.46
UBE2D3-217ENST00000504211 CLUAP1Q96AJ1 413 aa12.16□□□□□ -0.46
UBE2D3-217ENST00000504211 TRIM32Q13049 653 aa12.15□□□□□ -0.46
UBE2D3-217ENST00000504211 NBPF14Q5TI25 921 aa12.15□□□□□ -0.46
UBE2D3-217ENST00000504211 ZBTB24O43167 697 aaPredicted RBP12.14□□□□□ -0.47
UBE2D3-217ENST00000504211 ZMYND15Q9H091 742 aa12.14□□□□□ -0.47
UBE2D3-217ENST00000504211 IRF5Q13568 498 aa12.13□□□□□ -0.47
UBE2D3-217ENST00000504211 LIAT1Q6ZQX7 453 aa12.13□□□□□ -0.47
UBE2D3-217ENST00000504211 PDXDC2PQ6P474 469 aa12.12□□□□□ -0.47
UBE2D3-217ENST00000504211 PROSER2Q86WR7 435 aaPredicted RBP12.12□□□□□ -0.47
UBE2D3-217ENST00000504211 FNBP4Q8N3X1 1017 aaPredicted RBP12.12□□□□□ -0.47
UBE2D3-217ENST00000504211 ABL2P42684 1182 aa12.11□□□□□ -0.47
UBE2D3-217ENST00000504211 ZNF511Q8NB15 262 aa12.11□□□□□ -0.47
UBE2D3-217ENST00000504211 BAP1Q92560 729 aa12.11□□□□□ -0.47
UBE2D3-217ENST00000504211 GPSM3Q9Y4H4 160 aa12.11□□□□□ -0.47
UBE2D3-217ENST00000504211 SLC19A1P41440 591 aa12.1□□□□□ -0.47
UBE2D3-217ENST00000504211 SH3BP5LQ7L8J4 393 aa12.1□□□□□ -0.47
UBE2D3-217ENST00000504211 WNT7BP56706 349 aa12.09□□□□□ -0.47
UBE2D3-217ENST00000504211 V9GY48 417 aaPredicted RBP12.09□□□□□ -0.47
UBE2D3-217ENST00000504211 CD2BP2O95400 341 aaKnown RBP12.08□□□□□ -0.48
UBE2D3-217ENST00000504211 SH3BP2P78314 561 aa12.08□□□□□ -0.48
UBE2D3-217ENST00000504211 LINC01559Q495D7 138 aa12.08□□□□□ -0.48
UBE2D3-217ENST00000504211 SH3RF1Q7Z6J0 888 aa12.08□□□□□ -0.48
UBE2D3-217ENST00000504211 WWC1Q8IX03 1113 aa12.07□□□□□ -0.48
UBE2D3-217ENST00000504211 ZBBXA8MT70 800 aa12.06□□□□□ -0.48
UBE2D3-217ENST00000504211 SKOR1P84550 965 aa12.06□□□□□ -0.48
UBE2D3-217ENST00000504211 PTK2Q05397 1052 aa12.06□□□□□ -0.48
UBE2D3-217ENST00000504211 SPRYD7Q5W111 196 aa12.06□□□□□ -0.48
UBE2D3-217ENST00000504211 OCSTAMPQ9BR26 566 aa12.06□□□□□ -0.48
UBE2D3-217ENST00000504211 RGS20O76081 388 aa12.05□□□□□ -0.48
UBE2D3-217ENST00000504211 NR1H3Q13133 447 aa12.05□□□□□ -0.48
UBE2D3-217ENST00000504211 WASHC4Q2M389 1173 aa12.05□□□□□ -0.48
UBE2D3-217ENST00000504211 BPHLQ86WA6 291 aaPredicted RBP12.05□□□□□ -0.48
UBE2D3-217ENST00000504211 PRKD2Q9BZL6 878 aa12.05□□□□□ -0.48
UBE2D3-217ENST00000504211 FBXO45P0C2W1 286 aa12.04□□□□□ -0.48
UBE2D3-217ENST00000504211 TRAK2O60296 914 aa12.03□□□□□ -0.48
UBE2D3-217ENST00000504211 C4orf48Q5BLP8 95 aa12.03□□□□□ -0.48
UBE2D3-217ENST00000504211 FOXJ1Q92949 421 aa12.03□□□□□ -0.48
UBE2D3-217ENST00000504211 ZNF598Q86UK7 904 aaKnown RBP12.02□□□□□ -0.49
UBE2D3-217ENST00000504211 ARHGAP9Q9BRR9 750 aa12.02□□□□□ -0.49
UBE2D3-217ENST00000504211 C1QTNF2Q9BXJ5 285 aa12.02□□□□□ -0.49
UBE2D3-217ENST00000504211 ZNF697Q5TEC3 545 aa12□□□□□ -0.49
UBE2D3-217ENST00000504211 ZNF330Q9Y3S2 320 aaPredicted RBP12□□□□□ -0.49
UBE2D3-217ENST00000504211 WNT7AO00755 349 aa11.99□□□□□ -0.49
UBE2D3-217ENST00000504211 VAC14Q08AM6 782 aa11.99□□□□□ -0.49
UBE2D3-217ENST00000504211 AGERQ15109 404 aa11.99□□□□□ -0.49
UBE2D3-217ENST00000504211 RC3H1Q5TC82 1133 aaKnown RBP11.99□□□□□ -0.49
UBE2D3-217ENST00000504211 ADAM32Q8TC27 787 aa11.99□□□□□ -0.49
UBE2D3-217ENST00000504211 VARSP26640 1264 aaKnown RBP11.98□□□□□ -0.49
UBE2D3-217ENST00000504211 ERFEQ4G0M1 354 aa11.98□□□□□ -0.49
UBE2D3-217ENST00000504211 TRMT44Q8IYL2 757 aaKnown RBP11.98□□□□□ -0.49
UBE2D3-217ENST00000504211 MAGEB6P1A0A0J9YX57 407 aa11.97□□□□□ -0.49
UBE2D3-217ENST00000504211 SOX11P35716 441 aa11.97□□□□□ -0.49
UBE2D3-217ENST00000504211 POM121CA8CG34 1229 aa11.96□□□□□ -0.49
UBE2D3-217ENST00000504211 ZBTB33Q86T24 672 aa11.96□□□□□ -0.49
UBE2D3-217ENST00000504211 EHBP1Q8NDI1 1231 aa11.96□□□□□ -0.49
UBE2D3-217ENST00000504211 CARD14Q9BXL6 1004 aa11.96□□□□□ -0.49
UBE2D3-217ENST00000504211 EIF4G2P78344 907 aaKnown RBP eCLIP11.95□□□□□ -0.5
UBE2D3-217ENST00000504211 ZNF592Q92610 1267 aa11.95□□□□□ -0.5
UBE2D3-217ENST00000504211 PKD2L1Q9P0L9 805 aa11.95□□□□□ -0.5
UBE2D3-217ENST00000504211 FAM174AQ8TBP5 190 aa11.94□□□□□ -0.5
UBE2D3-217ENST00000504211 SIAH2O43255 324 aa11.93□□□□□ -0.5
UBE2D3-217ENST00000504211 MCCD1P59942 119 aaPredicted RBP11.93□□□□□ -0.5
UBE2D3-217ENST00000504211 MPNDQ8N594 471 aa11.93□□□□□ -0.5
UBE2D3-217ENST00000504211 MRGPRX2Q96LB1 330 aa11.93□□□□□ -0.5
UBE2D3-217ENST00000504211 GDF9O60383 454 aa11.92□□□□□ -0.5
UBE2D3-217ENST00000504211 ALG2Q9H553 416 aa11.92□□□□□ -0.5
UBE2D3-217ENST00000504211 MAP4K5Q9Y4K4 846 aa11.92□□□□□ -0.5
UBE2D3-217ENST00000504211 ADAMTS19Q8TE59 1207 aa11.91□□□□□ -0.5
UBE2D3-217ENST00000504211 SLC10A4Q96EP9 437 aa11.91□□□□□ -0.5
UBE2D3-217ENST00000504211 PRR20EP86478 221 aa11.9□□□□□ -0.5
UBE2D3-217ENST00000504211 PRR20CP86479 221 aa11.9□□□□□ -0.5
UBE2D3-217ENST00000504211 PRR20DP86480 221 aa11.9□□□□□ -0.5
UBE2D3-217ENST00000504211 PRR20BP86481 221 aa11.9□□□□□ -0.5
UBE2D3-217ENST00000504211 PRR20AP86496 221 aa11.9□□□□□ -0.5
UBE2D3-217ENST00000504211 TRIM67Q6ZTA4 783 aa11.9□□□□□ -0.5
UBE2D3-217ENST00000504211 CDV3Q9UKY7 258 aaKnown RBP11.9□□□□□ -0.5
UBE2D3-217ENST00000504211 PCDHB9Q9Y5E1 797 aa11.9□□□□□ -0.5
UBE2D3-217ENST00000504211 DZIP3Q86Y13 1208 aaKnown RBP11.89□□□□□ -0.51
UBE2D3-217ENST00000504211 GLMNQ92990 594 aa11.89□□□□□ -0.51
UBE2D3-217ENST00000504211 CDK15Q96Q40 435 aa11.89□□□□□ -0.51
UBE2D3-217ENST00000504211 ZNF777Q9ULD5 760 aaPredicted RBP11.89□□□□□ -0.51
UBE2D3-217ENST00000504211 FOXC1Q12948 553 aa11.87□□□□□ -0.51
UBE2D3-217ENST00000504211 SEMA3FQ13275 785 aa11.87□□□□□ -0.51
UBE2D3-217ENST00000504211 TLL2Q9Y6L7 1015 aa11.87□□□□□ -0.51
UBE2D3-217ENST00000504211 NBPF20Q3BBV1 942 aa11.86□□□□□ -0.51
UBE2D3-217ENST00000504211 HDGFL1Q5TGJ6 251 aa11.85□□□□□ -0.51
UBE2D3-217ENST00000504211 ESPNB1AK53 854 aa11.84□□□□□ -0.51
UBE2D3-217ENST00000504211 C1orf115Q9H7X2 142 aa11.84□□□□□ -0.51
UBE2D3-217ENST00000504211 TOR4AQ9NXH8 423 aa11.84□□□□□ -0.51
UBE2D3-217ENST00000504211 CEP126Q9P2H0 1117 aa11.84□□□□□ -0.51
UBE2D3-217ENST00000504211 ARID3CA6NKF2 412 aa11.83□□□□□ -0.52
UBE2D3-217ENST00000504211 TNFRSF10AO00220 468 aa11.83□□□□□ -0.52
UBE2D3-217ENST00000504211 ADH1CP00326 375 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms