RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 STK26Q9P289 416 aa19.32■□□□□ 0.68
LSM6-204ENST00000504181 SBNO1A3KN83 1393 aa19.32■□□□□ 0.68
LSM6-204ENST00000504181 PLEKHH1Q9ULM0 1364 aa19.32■□□□□ 0.68
LSM6-204ENST00000504181 NRXN1Q9ULB1 1477 aa19.3■□□□□ 0.68
LSM6-204ENST00000504181 FAM196AQ6ZSG2 479 aa19.3■□□□□ 0.68
LSM6-204ENST00000504181 PHF8Q9UPP1 1060 aa19.3■□□□□ 0.68
LSM6-204ENST00000504181 TECPR2O15040 1411 aa19.3■□□□□ 0.68
LSM6-204ENST00000504181 LOC105371045A0A1W2PR82 267 aa19.29■□□□□ 0.68
LSM6-204ENST00000504181 RRBP1Q9P2E9 1410 aaKnown RBP19.27■□□□□ 0.68
LSM6-204ENST00000504181 RGPD3A6NKT7 1758 aaPredicted RBP19.27■□□□□ 0.68
LSM6-204ENST00000504181 RGPD4Q7Z3J3 1758 aa19.27■□□□□ 0.68
LSM6-204ENST00000504181 SBF2Q86WG5 1849 aa19.27■□□□□ 0.68
LSM6-204ENST00000504181 RPGRIP1LQ68CZ1 1315 aa19.25■□□□□ 0.67
LSM6-204ENST00000504181 MSH5O43196 834 aa19.22■□□□□ 0.67
LSM6-204ENST00000504181 SPATA31A1Q5TZJ5 1347 aa19.22■□□□□ 0.67
LSM6-204ENST00000504181 PHRF1Q9P1Y6 1649 aaKnown RBP19.22■□□□□ 0.67
LSM6-204ENST00000504181 ITGAEP38570 1179 aa19.2■□□□□ 0.66
LSM6-204ENST00000504181 ABCC11Q96J66 1382 aa19.19■□□□□ 0.66
LSM6-204ENST00000504181 TMEM132EQ6IEE7 984 aa19.19■□□□□ 0.66
LSM6-204ENST00000504181 PMFBP1Q8TBY8 1022 aa19.19■□□□□ 0.66
LSM6-204ENST00000504181 ADGRF5Q8IZF2 1346 aa19.18■□□□□ 0.66
LSM6-204ENST00000504181 PARP4Q9UKK3 1724 aaKnown RBP19.17■□□□□ 0.66
LSM6-204ENST00000504181 PDE3BQ13370 1112 aa19.17■□□□□ 0.66
LSM6-204ENST00000504181 PRDM11Q9NQV5 511 aa19.16■□□□□ 0.66
LSM6-204ENST00000504181 STRN4Q9NRL3 753 aa19.16■□□□□ 0.66
LSM6-204ENST00000504181 USP35Q9P2H5 1018 aa19.16■□□□□ 0.66
LSM6-204ENST00000504181 YTHDC2Q9H6S0 1430 aaKnown RBP19.16■□□□□ 0.66
LSM6-204ENST00000504181 GIGYF1O75420 1035 aaPredicted RBP19.15■□□□□ 0.66
LSM6-204ENST00000504181 ZBTB7AO95365 584 aa19.15■□□□□ 0.66
LSM6-204ENST00000504181 PDGFDQ9GZP0 370 aaPredicted RBP19.15■□□□□ 0.66
LSM6-204ENST00000504181 ANO8Q9HCE9 1232 aaPredicted RBP19.14■□□□□ 0.65
LSM6-204ENST00000504181 DLC1Q96QB1 1528 aa19.14■□□□□ 0.65
LSM6-204ENST00000504181 PEAK1Q9H792 1746 aa19.14■□□□□ 0.65
LSM6-204ENST00000504181 PTGER2P43116 358 aa19.12■□□□□ 0.65
LSM6-204ENST00000504181 FHDC1Q9C0D6 1143 aaPredicted RBP19.12■□□□□ 0.65
LSM6-204ENST00000504181 KIAA0232Q92628 1395 aa19.11■□□□□ 0.65
LSM6-204ENST00000504181 CHRNA2Q15822 529 aa19.11■□□□□ 0.65
LSM6-204ENST00000504181 SYT17Q9BSW7 474 aa19.11■□□□□ 0.65
LSM6-204ENST00000504181 ATF5Q9Y2D1 282 aaPredicted RBP19.11■□□□□ 0.65
LSM6-204ENST00000504181 SHANK3Q9BYB0 1731 aa19.1■□□□□ 0.65
LSM6-204ENST00000504181 ANKARQ7Z5J8 1434 aa19.09■□□□□ 0.65
LSM6-204ENST00000504181 AKAP12Q02952 1782 aa19.09■□□□□ 0.65
LSM6-204ENST00000504181 GPRASP1Q5JY77 1395 aa19.09■□□□□ 0.65
LSM6-204ENST00000504181 SAFB2Q14151 953 aaKnown RBP eCLIP19.09■□□□□ 0.65
LSM6-204ENST00000504181 PIK3C2GO75747 1445 aa19.08■□□□□ 0.64
LSM6-204ENST00000504181 BARGINQ6ZT62 677 aa19.07■□□□□ 0.64
LSM6-204ENST00000504181 ITSN1Q15811 1721 aa19.07■□□□□ 0.64
LSM6-204ENST00000504181 SSH2Q76I76 1423 aa19.07■□□□□ 0.64
LSM6-204ENST00000504181 WNK3Q9BYP7 1800 aa19.07■□□□□ 0.64
LSM6-204ENST00000504181 LRRC37A3O60309 1634 aa19.06■□□□□ 0.64
LSM6-204ENST00000504181 ACIN1Q9UKV3 1341 aaKnown RBP19.05■□□□□ 0.64
LSM6-204ENST00000504181 PAK3O75914 559 aaPredicted RBP19.05■□□□□ 0.64
LSM6-204ENST00000504181 LMO7Q8WWI1 1683 aa19.05■□□□□ 0.64
LSM6-204ENST00000504181 RGL3Q3MIN7 710 aa19.04■□□□□ 0.64
LSM6-204ENST00000504181 SIRT1Q96EB6 747 aa19.04■□□□□ 0.64
LSM6-204ENST00000504181 BCL11BQ9C0K0 894 aaPredicted RBP19.04■□□□□ 0.64
LSM6-204ENST00000504181 EVA1CP58658 441 aa19.03■□□□□ 0.64
LSM6-204ENST00000504181 ZC3H6P61129 1189 aaKnown RBP19.03■□□□□ 0.64
LSM6-204ENST00000504181 GOLGB1Q14789 3259 aaKnown RBP19.03■□□□□ 0.64
LSM6-204ENST00000504181 OVOS2A0A0G2JMS6 1433 aa19.02■□□□□ 0.64
LSM6-204ENST00000504181 OVOS2A0A0J9YW53 1432 aa19.02■□□□□ 0.64
LSM6-204ENST00000504181 OVOS2Q6IE36 1432 aa19.02■□□□□ 0.64
LSM6-204ENST00000504181 PLSCR1O15162 318 aa19.02■□□□□ 0.64
LSM6-204ENST00000504181 PRAM1Q96QH2 718 aa19.02■□□□□ 0.64
LSM6-204ENST00000504181 ANKRD30BQ9BXX2 1392 aa19.02■□□□□ 0.64
LSM6-204ENST00000504181 LARP1Q6PKG0 1096 aaKnown RBP19.01■□□□□ 0.63
LSM6-204ENST00000504181 TCP11L2Q8N4U5 519 aa19.01■□□□□ 0.63
LSM6-204ENST00000504181 TULP4Q9NRJ4 1543 aa19■□□□□ 0.63
LSM6-204ENST00000504181 SPATA31E1Q6ZUB1 1445 aa18.99■□□□□ 0.63
LSM6-204ENST00000504181 GPR162Q16538 588 aa18.98■□□□□ 0.63
LSM6-204ENST00000504181 PTF1AQ7RTS3 328 aa18.98■□□□□ 0.63
LSM6-204ENST00000504181 PRR36Q9H6K5 1346 aa18.98■□□□□ 0.63
LSM6-204ENST00000504181 DHX57Q6P158 1386 aaKnown RBP18.97■□□□□ 0.63
LSM6-204ENST00000504181 C11orf95C9JLR9 678 aaPredicted RBP18.97■□□□□ 0.63
LSM6-204ENST00000504181 NGDNQ8NEJ9 315 aaKnown RBP18.97■□□□□ 0.63
LSM6-204ENST00000504181 SGIP1Q9BQI5 828 aa18.97■□□□□ 0.63
LSM6-204ENST00000504181 MTFR1LQ9H019 292 aa18.97■□□□□ 0.63
LSM6-204ENST00000504181 ATP7BP35670 1465 aa18.97■□□□□ 0.63
LSM6-204ENST00000504181 TOPAZ1Q8N9V7 1692 aa18.96■□□□□ 0.63
LSM6-204ENST00000504181 PROM2Q8N271 834 aa18.96■□□□□ 0.63
LSM6-204ENST00000504181 HIRIP3Q9BW71 556 aaPredicted RBP18.96■□□□□ 0.63
LSM6-204ENST00000504181 SLC4A1APQ9BWU0 796 aaKnown RBP18.96■□□□□ 0.63
LSM6-204ENST00000504181 STK32BQ9NY57 414 aa18.96■□□□□ 0.63
LSM6-204ENST00000504181 POGKQ9P215 609 aa18.96■□□□□ 0.63
LSM6-204ENST00000504181 NUTM2GQ5VZR2 741 aa18.95■□□□□ 0.62
LSM6-204ENST00000504181 ARXQ96QS3 562 aa18.95■□□□□ 0.62
LSM6-204ENST00000504181 THRAP3Q9Y2W1 955 aaKnown RBP18.94■□□□□ 0.62
LSM6-204ENST00000504181 MAP3K5Q99683 1374 aa18.93■□□□□ 0.62
LSM6-204ENST00000504181 SLC15A2Q16348 729 aa18.93■□□□□ 0.62
LSM6-204ENST00000504181 EIF3AQ14152 1382 aaKnown RBP18.93■□□□□ 0.62
LSM6-204ENST00000504181 PELP1Q8IZL8 1130 aaKnown RBP18.92■□□□□ 0.62
LSM6-204ENST00000504181 C14orf93Q9H972 538 aaKnown RBP18.92■□□□□ 0.62
LSM6-204ENST00000504181 CFAP70Q5T0N1 1121 aa18.91■□□□□ 0.62
LSM6-204ENST00000504181 COL5A2P05997 1499 aaPredicted RBP18.9■□□□□ 0.62
LSM6-204ENST00000504181 COL24A1Q17RW2 1714 aa18.9■□□□□ 0.62
LSM6-204ENST00000504181 MINK1Q8N4C8 1332 aaPredicted RBP18.9■□□□□ 0.62
LSM6-204ENST00000504181 KAT6BQ8WYB5 2073 aa18.89■□□□□ 0.62
LSM6-204ENST00000504181 PAPPAQ13219 1627 aa18.89■□□□□ 0.62
LSM6-204ENST00000504181 RGPD5Q99666 1765 aa18.89■□□□□ 0.61
LSM6-204ENST00000504181 TXNRD1Q16881 649 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms