RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 COL22A1Q8NFW1 1626 aaPredicted RBP22.98■■□□□ 1.27
SCLT1-205ENST00000503401 MON2Q7Z3U7 1717 aa22.97■■□□□ 1.27
SCLT1-205ENST00000503401 LRP6O75581 1613 aa22.96■■□□□ 1.27
SCLT1-205ENST00000503401 KTN1Q86UP2 1357 aaKnown RBP22.96■■□□□ 1.27
SCLT1-205ENST00000503401 MED1Q15648 1581 aaPredicted RBP22.96■■□□□ 1.27
SCLT1-205ENST00000503401 SPATA31A6Q5VVP1 1343 aa22.96■■□□□ 1.27
SCLT1-205ENST00000503401 A0A1W2PP64 1363 aa22.95■■□□□ 1.27
SCLT1-205ENST00000503401 NUTM2GQ5VZR2 741 aa22.95■■□□□ 1.26
SCLT1-205ENST00000503401 ZNF692Q9BU19 519 aaPredicted RBP22.95■■□□□ 1.26
SCLT1-205ENST00000503401 CABLES1Q8TDN4 633 aa22.94■■□□□ 1.26
SCLT1-205ENST00000503401 ARHGEF10O15013 1369 aa22.94■■□□□ 1.26
SCLT1-205ENST00000503401 NINLQ9Y2I6 1382 aa22.94■■□□□ 1.26
SCLT1-205ENST00000503401 NRKQ7Z2Y5 1582 aa22.94■■□□□ 1.26
SCLT1-205ENST00000503401 HDGFL2Q7Z4V5 671 aaPredicted RBP22.93■■□□□ 1.26
SCLT1-205ENST00000503401 SSH2Q76I76 1423 aa22.93■■□□□ 1.26
SCLT1-205ENST00000503401 TERF2IPQ9NYB0 399 aa22.93■■□□□ 1.26
SCLT1-205ENST00000503401 ABTB2Q8N961 1025 aa22.92■■□□□ 1.26
SCLT1-205ENST00000503401 ABCA3Q99758 1704 aa22.91■■□□□ 1.26
SCLT1-205ENST00000503401 KIF7Q2M1P5 1343 aa22.91■■□□□ 1.26
SCLT1-205ENST00000503401 TTC21BQ7Z4L5 1316 aa22.91■■□□□ 1.26
SCLT1-205ENST00000503401 ADAMTS2O95450 1211 aa22.9■■□□□ 1.26
SCLT1-205ENST00000503401 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.9■■□□□ 1.26
SCLT1-205ENST00000503401 PIK3C2AO00443 1686 aa22.9■■□□□ 1.26
SCLT1-205ENST00000503401 ANKRD36BQ8N2N9 1353 aa22.9■■□□□ 1.26
SCLT1-205ENST00000503401 BRD4O60885 1362 aaPredicted RBP22.88■■□□□ 1.25
SCLT1-205ENST00000503401 MEX3CQ5U5Q3 659 aaKnown RBP22.88■■□□□ 1.25
SCLT1-205ENST00000503401 CRYBG1Q9Y4K1 1723 aa22.87■■□□□ 1.25
SCLT1-205ENST00000503401 EDC4Q6P2E9 1401 aaKnown RBP22.86■■□□□ 1.25
SCLT1-205ENST00000503401 HAP1P54257 671 aaPredicted RBP22.86■■□□□ 1.25
SCLT1-205ENST00000503401 NLRP6P59044 892 aa22.85■■□□□ 1.25
SCLT1-205ENST00000503401 MARF1Q9Y4F3 1742 aaKnown RBP22.84■■□□□ 1.25
SCLT1-205ENST00000503401 NME9Q86XW9 330 aa22.84■■□□□ 1.25
SCLT1-205ENST00000503401 ZRANB1Q9UGI0 708 aa22.84■■□□□ 1.25
SCLT1-205ENST00000503401 PHRF1Q9P1Y6 1649 aaKnown RBP22.84■■□□□ 1.25
SCLT1-205ENST00000503401 WASHC2AQ641Q2 1341 aa22.84■■□□□ 1.25
SCLT1-205ENST00000503401 TTC21AQ8NDW8 1320 aa22.84■■□□□ 1.25
SCLT1-205ENST00000503401 CCDC7Q96M83 1385 aa22.83■■□□□ 1.25
SCLT1-205ENST00000503401 C8orf37Q96NL8 207 aa22.82■■□□□ 1.24
SCLT1-205ENST00000503401 CARD14Q9BXL6 1004 aa22.82■■□□□ 1.24
SCLT1-205ENST00000503401 NLRP13Q86W25 1043 aa22.82■■□□□ 1.24
SCLT1-205ENST00000503401 PHF23Q9BUL5 403 aaPredicted RBP22.81■■□□□ 1.24
SCLT1-205ENST00000503401 NSD3Q9BZ95 1437 aa22.8■■□□□ 1.24
SCLT1-205ENST00000503401 PANK3Q9H999 370 aa22.8■■□□□ 1.24
SCLT1-205ENST00000503401 USP19O94966 1318 aa22.79■■□□□ 1.24
SCLT1-205ENST00000503401 SOX12O15370 315 aa22.78■■□□□ 1.24
SCLT1-205ENST00000503401 NGLY1Q96IV0 654 aa22.78■■□□□ 1.24
SCLT1-205ENST00000503401 KIF20BQ96Q89 1820 aa22.76■■□□□ 1.23
SCLT1-205ENST00000503401 ZC3H6P61129 1189 aaKnown RBP22.76■■□□□ 1.23
SCLT1-205ENST00000503401 RGS17Q9UGC6 210 aaPredicted RBP22.76■■□□□ 1.23
SCLT1-205ENST00000503401 SLIT3O75094 1523 aa22.76■■□□□ 1.23
SCLT1-205ENST00000503401 AFF2P51816 1311 aa22.76■■□□□ 1.23
SCLT1-205ENST00000503401 GCP02774 474 aa22.75■■□□□ 1.23
SCLT1-205ENST00000503401 USP31Q70CQ4 1352 aa22.75■■□□□ 1.23
SCLT1-205ENST00000503401 USP54Q70EL1 1684 aa22.75■■□□□ 1.23
SCLT1-205ENST00000503401 KIAA0232Q92628 1395 aa22.74■■□□□ 1.23
SCLT1-205ENST00000503401 FAM83GA6ND36 823 aa22.74■■□□□ 1.23
SCLT1-205ENST00000503401 FYB1O15117 783 aa22.74■■□□□ 1.23
SCLT1-205ENST00000503401 GGNBP2Q9H3C7 697 aa22.74■■□□□ 1.23
SCLT1-205ENST00000503401 OVOS2A0A0J9YW53 1432 aa22.73■■□□□ 1.23
SCLT1-205ENST00000503401 OVOS2Q6IE36 1432 aa22.73■■□□□ 1.23
SCLT1-205ENST00000503401 CHRNA2Q15822 529 aa22.72■■□□□ 1.23
SCLT1-205ENST00000503401 PLCH1Q4KWH8 1693 aa22.72■■□□□ 1.23
SCLT1-205ENST00000503401 ZBTB7CA1YPR0 619 aa22.71■■□□□ 1.23
SCLT1-205ENST00000503401 PRDM11Q9NQV5 511 aa22.71■■□□□ 1.23
SCLT1-205ENST00000503401 COG3Q96JB2 828 aa22.7■■□□□ 1.22
SCLT1-205ENST00000503401 NFAT5O94916 1531 aa22.7■■□□□ 1.22
SCLT1-205ENST00000503401 FNBP4Q8N3X1 1017 aaPredicted RBP22.69■■□□□ 1.22
SCLT1-205ENST00000503401 COL14A1Q05707 1796 aaKnown RBP22.69■■□□□ 1.22
SCLT1-205ENST00000503401 KCNH5Q8NCM2 988 aa22.68■■□□□ 1.22
SCLT1-205ENST00000503401 USP21Q9UK80 565 aa22.68■■□□□ 1.22
SCLT1-205ENST00000503401 CGNL1Q0VF96 1302 aa22.68■■□□□ 1.22
SCLT1-205ENST00000503401 SLIT2O94813 1529 aa22.68■■□□□ 1.22
SCLT1-205ENST00000503401 BCL9LQ86UU0 1499 aa22.67■■□□□ 1.22
SCLT1-205ENST00000503401 FBLN1P23142 703 aa22.67■■□□□ 1.22
SCLT1-205ENST00000503401 POTEAQ6S8J7 498 aa22.67■■□□□ 1.22
SCLT1-205ENST00000503401 CPDO75976 1380 aa22.66■■□□□ 1.22
SCLT1-205ENST00000503401 BTG4Q9NY30 223 aa22.66■■□□□ 1.22
SCLT1-205ENST00000503401 LTN1O94822 1766 aa22.66■■□□□ 1.22
SCLT1-205ENST00000503401 NWD2Q9ULI1 1742 aa22.65■■□□□ 1.22
SCLT1-205ENST00000503401 ZNF772Q68DY9 489 aaPredicted RBP22.65■■□□□ 1.22
SCLT1-205ENST00000503401 KNSTRNQ9Y448 316 aa22.65■■□□□ 1.22
SCLT1-205ENST00000503401 NRAPQ86VF7 1730 aa22.63■■□□□ 1.21
SCLT1-205ENST00000503401 ANKRD26Q9UPS8 1709 aa22.63■■□□□ 1.21
SCLT1-205ENST00000503401 RGPD5Q99666 1765 aa22.63■■□□□ 1.21
SCLT1-205ENST00000503401 PER1O15534 1290 aaPredicted RBP22.63■■□□□ 1.21
SCLT1-205ENST00000503401 ARHGEF25Q86VW2 580 aa22.63■■□□□ 1.21
SCLT1-205ENST00000503401 LMO7Q8WWI1 1683 aa22.62■■□□□ 1.21
SCLT1-205ENST00000503401 UNC5CLQ8IV45 518 aa22.62■■□□□ 1.21
SCLT1-205ENST00000503401 CAMTA1Q9Y6Y1 1673 aa22.62■■□□□ 1.21
SCLT1-205ENST00000503401 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.62■■□□□ 1.21
SCLT1-205ENST00000503401 COL18A1P39060 1754 aa22.62■■□□□ 1.21
SCLT1-205ENST00000503401 QTRT2Q9H974 415 aaKnown RBP22.61■■□□□ 1.21
SCLT1-205ENST00000503401 CNGB1Q14028 1251 aaPredicted RBP22.6■■□□□ 1.21
SCLT1-205ENST00000503401 AMER1Q5JTC6 1135 aaPredicted RBP22.6■■□□□ 1.21
SCLT1-205ENST00000503401 AXIN2Q9Y2T1 843 aa22.6■■□□□ 1.21
SCLT1-205ENST00000503401 AATKQ6ZMQ8 1374 aa22.59■■□□□ 1.21
SCLT1-205ENST00000503401 TNNT2P45379 298 aaPredicted RBP22.59■■□□□ 1.21
SCLT1-205ENST00000503401 RRS1Q15050 365 aaKnown RBP22.59■■□□□ 1.21
SCLT1-205ENST00000503401 STRN4Q9NRL3 753 aa22.59■■□□□ 1.21
SCLT1-205ENST00000503401 ATRNO75882 1429 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms