RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 APLP1P51693 650 aa9.21□□□□□ -0.94
HMGB1P3-201ENST00000502802 THAP11Q96EK4 314 aa9.21□□□□□ -0.94
HMGB1P3-201ENST00000502802 STAC3Q96MF2 364 aa9.21□□□□□ -0.94
HMGB1P3-201ENST00000502802 HPS5Q9UPZ3 1129 aa9.21□□□□□ -0.94
HMGB1P3-201ENST00000502802 ZC3H4Q9UPT8 1303 aaKnown RBP9.21□□□□□ -0.94
HMGB1P3-201ENST00000502802 JUNDP17535 347 aa9.2□□□□□ -0.94
HMGB1P3-201ENST00000502802 PTPRNQ16849 979 aa9.2□□□□□ -0.94
HMGB1P3-201ENST00000502802 TSR3Q9UJK0 312 aaKnown RBP9.2□□□□□ -0.94
HMGB1P3-201ENST00000502802 PCDHB3Q9Y5E6 796 aa9.2□□□□□ -0.94
HMGB1P3-201ENST00000502802 POTEB3A0JP26 581 aa9.19□□□□□ -0.94
HMGB1P3-201ENST00000502802 LHX8Q68G74 356 aa9.19□□□□□ -0.94
HMGB1P3-201ENST00000502802 POTEBQ6S5H4 581 aa9.19□□□□□ -0.94
HMGB1P3-201ENST00000502802 VRTNQ9H8Y1 702 aa9.19□□□□□ -0.94
HMGB1P3-201ENST00000502802 CARNS1A5YM72 827 aa9.18□□□□□ -0.94
HMGB1P3-201ENST00000502802 MAP10Q9P2G4 905 aa9.18□□□□□ -0.94
HMGB1P3-201ENST00000502802 TMEM88BA6NKF7 163 aa9.17□□□□□ -0.94
HMGB1P3-201ENST00000502802 BCAMP50895 628 aa9.17□□□□□ -0.94
HMGB1P3-201ENST00000502802 MFAP1P55081 439 aaKnown RBP9.17□□□□□ -0.94
HMGB1P3-201ENST00000502802 NFATC2IPQ8NCF5 419 aa9.17□□□□□ -0.94
HMGB1P3-201ENST00000502802 CTHP32929 405 aa9.16□□□□□ -0.94
HMGB1P3-201ENST00000502802 KANK4Q5T7N3 995 aaPredicted RBP9.16□□□□□ -0.94
HMGB1P3-201ENST00000502802 PIK3CDO00329 1044 aa9.15□□□□□ -0.94
HMGB1P3-201ENST00000502802 ELOAQ14241 798 aaKnown RBP9.15□□□□□ -0.94
HMGB1P3-201ENST00000502802 MSS51Q4VC12 460 aa9.15□□□□□ -0.94
HMGB1P3-201ENST00000502802 RGS22Q8NE09 1264 aa9.15□□□□□ -0.94
HMGB1P3-201ENST00000502802 WNT2BQ93097 391 aa9.15□□□□□ -0.94
HMGB1P3-201ENST00000502802 CCNYL3P0C7X3 344 aa9.14□□□□□ -0.95
HMGB1P3-201ENST00000502802 SKIP12755 728 aa9.14□□□□□ -0.95
HMGB1P3-201ENST00000502802 ARMC2Q8NEN0 867 aa9.14□□□□□ -0.95
HMGB1P3-201ENST00000502802 ZNF592Q92610 1267 aa9.14□□□□□ -0.95
HMGB1P3-201ENST00000502802 EVA1BQ9NVM1 165 aa9.14□□□□□ -0.95
HMGB1P3-201ENST00000502802 GPSM3Q9Y4H4 160 aa9.14□□□□□ -0.95
HMGB1P3-201ENST00000502802 PTK2Q05397 1052 aa9.13□□□□□ -0.95
HMGB1P3-201ENST00000502802 PDXDC2PQ6P474 469 aa9.13□□□□□ -0.95
HMGB1P3-201ENST00000502802 PLEKHM2Q8IWE5 1019 aa9.13□□□□□ -0.95
HMGB1P3-201ENST00000502802 GPKOWQ92917 476 aaPredicted RBP eCLIP9.13□□□□□ -0.95
HMGB1P3-201ENST00000502802 FAM163AQ96GL9 167 aaPredicted RBP9.13□□□□□ -0.95
HMGB1P3-201ENST00000502802 USP17L3A6NCW0 530 aa9.12□□□□□ -0.95
HMGB1P3-201ENST00000502802 USP17L4A6NCW7 530 aa9.12□□□□□ -0.95
HMGB1P3-201ENST00000502802 DXOO77932 396 aaKnown RBP9.12□□□□□ -0.95
HMGB1P3-201ENST00000502802 MCCD1P59942 119 aaPredicted RBP9.12□□□□□ -0.95
HMGB1P3-201ENST00000502802 KCNH2Q12809 1159 aa9.12□□□□□ -0.95
HMGB1P3-201ENST00000502802 USP17L2Q6R6M4 530 aa9.12□□□□□ -0.95
HMGB1P3-201ENST00000502802 ANKRD13DQ6ZTN6 518 aa9.12□□□□□ -0.95
HMGB1P3-201ENST00000502802 USP17L1Q7RTZ2 530 aa9.12□□□□□ -0.95
HMGB1P3-201ENST00000502802 SPSB2Q99619 263 aa9.12□□□□□ -0.95
HMGB1P3-201ENST00000502802 NUDT12Q9BQG2 462 aa9.12□□□□□ -0.95
HMGB1P3-201ENST00000502802 MTMR7Q9Y216 660 aa9.12□□□□□ -0.95
HMGB1P3-201ENST00000502802 USP17L5A8MUK1 530 aa9.11□□□□□ -0.95
HMGB1P3-201ENST00000502802 FAM160A2Q8N612 972 aaPredicted RBP9.11□□□□□ -0.95
HMGB1P3-201ENST00000502802 CEP126Q9P2H0 1117 aa9.11□□□□□ -0.95
HMGB1P3-201ENST00000502802 IVNS1ABPQ9Y6Y0 642 aa9.11□□□□□ -0.95
HMGB1P3-201ENST00000502802 MMP16P51512 607 aa9.1□□□□□ -0.95
HMGB1P3-201ENST00000502802 SLFNL1Q499Z3 407 aa9.1□□□□□ -0.95
HMGB1P3-201ENST00000502802 B4GALNT3Q6L9W6 998 aa9.1□□□□□ -0.95
HMGB1P3-201ENST00000502802 FAM174AQ8TBP5 190 aa9.1□□□□□ -0.95
HMGB1P3-201ENST00000502802 WBP1LQ9NX94 342 aa9.1□□□□□ -0.95
HMGB1P3-201ENST00000502802 NBPF14Q5TI25 921 aa9.09□□□□□ -0.95
HMGB1P3-201ENST00000502802 ZMIZ1Q9ULJ6 1067 aa9.09□□□□□ -0.95
HMGB1P3-201ENST00000502802 NOVA2Q9UNW9 492 aaKnown RBP9.09□□□□□ -0.95
HMGB1P3-201ENST00000502802 OCSTAMPQ9BR26 566 aa9.08□□□□□ -0.96
HMGB1P3-201ENST00000502802 MKRN1Q9UHC7 482 aaKnown RBP9.08□□□□□ -0.96
HMGB1P3-201ENST00000502802 PCDHB9Q9Y5E1 797 aa9.08□□□□□ -0.96
HMGB1P3-201ENST00000502802 FAM196BA6NMK8 535 aa9.07□□□□□ -0.96
HMGB1P3-201ENST00000502802 LZTS3O60299 673 aaPredicted RBP9.07□□□□□ -0.96
HMGB1P3-201ENST00000502802 COPS2P61201 443 aa9.07□□□□□ -0.96
HMGB1P3-201ENST00000502802 TMEM164Q5U3C3 297 aa9.07□□□□□ -0.96
HMGB1P3-201ENST00000502802 RNF135Q8IUD6 432 aa9.07□□□□□ -0.96
HMGB1P3-201ENST00000502802 DEPDC4Q8N2C3 294 aa9.07□□□□□ -0.96
HMGB1P3-201ENST00000502802 PHTF2Q8N3S3 785 aa9.07□□□□□ -0.96
HMGB1P3-201ENST00000502802 USP17L15C9J2P7 530 aa9.06□□□□□ -0.96
HMGB1P3-201ENST00000502802 USP17L10C9JJH3 530 aa9.06□□□□□ -0.96
HMGB1P3-201ENST00000502802 USP17L13C9JLJ4 530 aa9.06□□□□□ -0.96
HMGB1P3-201ENST00000502802 USP17L12C9JPN9 530 aa9.06□□□□□ -0.96
HMGB1P3-201ENST00000502802 USP17L11C9JVI0 530 aa9.06□□□□□ -0.96
HMGB1P3-201ENST00000502802 USP17L21D6R901 530 aa9.06□□□□□ -0.96
HMGB1P3-201ENST00000502802 USP17L18D6R9N7 530 aa9.06□□□□□ -0.96
HMGB1P3-201ENST00000502802 USP17L22D6RA61 530 aa9.06□□□□□ -0.96
HMGB1P3-201ENST00000502802 USP17L17D6RBQ6 530 aa9.06□□□□□ -0.96
HMGB1P3-201ENST00000502802 USP17L19D6RCP7 530 aa9.06□□□□□ -0.96
HMGB1P3-201ENST00000502802 USP17L20D6RJB6 530 aa9.06□□□□□ -0.96
HMGB1P3-201ENST00000502802 USP17L24Q0WX57 530 aa9.06□□□□□ -0.96
HMGB1P3-201ENST00000502802 STK32AQ8WU08 396 aa9.06□□□□□ -0.96
HMGB1P3-201ENST00000502802 ARHGAP9Q9BRR9 750 aa9.06□□□□□ -0.96
HMGB1P3-201ENST00000502802 PRDM9Q9NQV7 894 aa9.06□□□□□ -0.96
HMGB1P3-201ENST00000502802 ATP5J2-PTCD1G3V325 749 aa9.05□□□□□ -0.96
HMGB1P3-201ENST00000502802 NCOA4Q13772 614 aa9.05□□□□□ -0.96
HMGB1P3-201ENST00000502802 LARP1Q6PKG0 1096 aaKnown RBP9.05□□□□□ -0.96
HMGB1P3-201ENST00000502802 PLPP7Q8NBV4 271 aa9.05□□□□□ -0.96
HMGB1P3-201ENST00000502802 GNEQ9Y223 722 aaKnown RBP9.05□□□□□ -0.96
HMGB1P3-201ENST00000502802 MAP7D1Q3KQU3 841 aa9.04□□□□□ -0.96
HMGB1P3-201ENST00000502802 CRTC2Q53ET0 693 aaPredicted RBP9.04□□□□□ -0.96
HMGB1P3-201ENST00000502802 FOXD4L5Q5VV16 416 aaPredicted RBP9.04□□□□□ -0.96
HMGB1P3-201ENST00000502802 SND1Q7KZF4 910 aaKnown RBP eCLIP9.04□□□□□ -0.96
HMGB1P3-201ENST00000502802 ZBTB33Q86T24 672 aa9.04□□□□□ -0.96
HMGB1P3-201ENST00000502802 ADAM32Q8TC27 787 aa9.04□□□□□ -0.96
HMGB1P3-201ENST00000502802 FOXD4L4Q8WXT5 416 aaPredicted RBP9.04□□□□□ -0.96
HMGB1P3-201ENST00000502802 ADH1BP00325 375 aa9.03□□□□□ -0.96
HMGB1P3-201ENST00000502802 RASA1P20936 1047 aa9.03□□□□□ -0.96
HMGB1P3-201ENST00000502802 PTK7Q13308 1070 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms