RNA–Protein interactions for RNA: ENST00000502484.6

PDE4D-208, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-208ENST00000502484 CDC42BPGQ6DT37 1551 aa10.82□□□□□ -0.68
PDE4D-208ENST00000502484 NWD1Q149M9 1564 aa10.81□□□□□ -0.68
PDE4D-208ENST00000502484 CPSF1Q10570 1443 aaKnown RBP10.81□□□□□ -0.68
PDE4D-208ENST00000502484 GOLGA2Q08379 1002 aa10.81□□□□□ -0.68
PDE4D-208ENST00000502484 GGNBP2Q9H3C7 697 aa10.81□□□□□ -0.68
PDE4D-208ENST00000502484 TSHZ2Q9NRE2 1034 aa10.81□□□□□ -0.68
PDE4D-208ENST00000502484 IQSEC2Q5JU85 1478 aa10.81□□□□□ -0.68
PDE4D-208ENST00000502484 MAP2P11137 1827 aaKnown RBP10.81□□□□□ -0.68
PDE4D-208ENST00000502484 TOPAZ1Q8N9V7 1692 aa10.81□□□□□ -0.68
PDE4D-208ENST00000502484 ROBO2Q9HCK4 1378 aa10.81□□□□□ -0.68
PDE4D-208ENST00000502484 XRN1Q8IZH2 1706 aaKnown RBP10.81□□□□□ -0.68
PDE4D-208ENST00000502484 PPIP5K1Q6PFW1 1433 aa10.81□□□□□ -0.68
PDE4D-208ENST00000502484 DUSP27Q5VZP5 1158 aa10.81□□□□□ -0.68
PDE4D-208ENST00000502484 PROSER2Q86WR7 435 aaPredicted RBP10.81□□□□□ -0.68
PDE4D-208ENST00000502484 COL3A1P02461 1466 aaPredicted RBP10.81□□□□□ -0.68
PDE4D-208ENST00000502484 LTBP4Q8N2S1 1624 aa10.8□□□□□ -0.68
PDE4D-208ENST00000502484 RBM33Q96EV2 1170 aaKnown RBP10.8□□□□□ -0.68
PDE4D-208ENST00000502484 NKTRP30414 1462 aaKnown RBP10.8□□□□□ -0.68
PDE4D-208ENST00000502484 EDC4Q6P2E9 1401 aaKnown RBP10.79□□□□□ -0.68
PDE4D-208ENST00000502484 SLFN5Q08AF3 891 aa10.79□□□□□ -0.68
PDE4D-208ENST00000502484 TRMT2AQ8IZ69 625 aaKnown RBP10.79□□□□□ -0.68
PDE4D-208ENST00000502484 B4GALNT3Q6L9W6 998 aa10.79□□□□□ -0.68
PDE4D-208ENST00000502484 RUNDC1Q96C34 613 aa10.79□□□□□ -0.68
PDE4D-208ENST00000502484 C14orf37Q86TY3 774 aa10.78□□□□□ -0.68
PDE4D-208ENST00000502484 NUDT16Q96DE0 195 aaKnown RBP10.78□□□□□ -0.68
PDE4D-208ENST00000502484 CCDC61Q9Y6R9 512 aa10.78□□□□□ -0.68
PDE4D-208ENST00000502484 LRRC7Q96NW7 1537 aa10.78□□□□□ -0.68
PDE4D-208ENST00000502484 TMEM94Q12767 1356 aa10.77□□□□□ -0.69
PDE4D-208ENST00000502484 PTCH1Q13635 1447 aa10.77□□□□□ -0.69
PDE4D-208ENST00000502484 NRKQ7Z2Y5 1582 aa10.77□□□□□ -0.69
PDE4D-208ENST00000502484 XIRP1Q702N8 1843 aaKnown RBP10.77□□□□□ -0.69
PDE4D-208ENST00000502484 PNPLA6Q8IY17 1366 aa10.77□□□□□ -0.69
PDE4D-208ENST00000502484 NCBP3Q53F19 620 aaKnown RBP10.77□□□□□ -0.69
PDE4D-208ENST00000502484 E9PSI1 815 aa10.76□□□□□ -0.69
PDE4D-208ENST00000502484 PRR36Q9H6K5 1346 aa10.76□□□□□ -0.69
PDE4D-208ENST00000502484 CERKQ8TCT0 537 aa10.76□□□□□ -0.69
PDE4D-208ENST00000502484 WWC1Q8IX03 1113 aa10.75□□□□□ -0.69
PDE4D-208ENST00000502484 TCP11L2Q8N4U5 519 aa10.75□□□□□ -0.69
PDE4D-208ENST00000502484 SPINK5Q9NQ38 1064 aaPredicted RBP10.75□□□□□ -0.69
PDE4D-208ENST00000502484 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.75□□□□□ -0.691e-6■■■□□ 15.3
PDE4D-208ENST00000502484 RGPD8O14715 1765 aaPredicted RBP10.74□□□□□ -0.69
PDE4D-208ENST00000502484 U2AF1L5P0DN76 240 aaPredicted RBP10.74□□□□□ -0.69
PDE4D-208ENST00000502484 U2AF1Q01081 240 aaKnown RBP eCLIP10.74□□□□□ -0.69
PDE4D-208ENST00000502484 CCDC27Q2M243 656 aa10.74□□□□□ -0.69
PDE4D-208ENST00000502484 CCDC136Q96JN2 1154 aa10.74□□□□□ -0.69
PDE4D-208ENST00000502484 ZNF692Q9BU19 519 aaPredicted RBP10.74□□□□□ -0.69
PDE4D-208ENST00000502484 EXOC6Q8TAG9 804 aa10.73□□□□□ -0.69
PDE4D-208ENST00000502484 C19orf44Q9H6X5 657 aa10.73□□□□□ -0.69
PDE4D-208ENST00000502484 NCOA3Q9Y6Q9 1424 aa10.73□□□□□ -0.69
PDE4D-208ENST00000502484 MSH6P52701 1360 aa10.73□□□□□ -0.69
PDE4D-208ENST00000502484 NALCNQ8IZF0 1738 aa10.73□□□□□ -0.69
PDE4D-208ENST00000502484 AATKQ6ZMQ8 1374 aa10.72□□□□□ -0.69
PDE4D-208ENST00000502484 PLIN1O60240 522 aa10.72□□□□□ -0.69
PDE4D-208ENST00000502484 DIAPH1O60610 1272 aaKnown RBP10.72□□□□□ -0.69
PDE4D-208ENST00000502484 WDR63Q8IWG1 891 aa10.72□□□□□ -0.69
PDE4D-208ENST00000502484 ADGRL3Q9HAR2 1447 aa10.72□□□□□ -0.69
PDE4D-208ENST00000502484 PLEKHG3A1L390 1219 aa10.72□□□□□ -0.69
PDE4D-208ENST00000502484 NME9Q86XW9 330 aa10.72□□□□□ -0.69
PDE4D-208ENST00000502484 PLEKHF1Q96S99 279 aa10.72□□□□□ -0.69
PDE4D-208ENST00000502484 POLKQ9UBT6 870 aa10.72□□□□□ -0.69
PDE4D-208ENST00000502484 CDK12Q9NYV4 1490 aaPredicted RBP10.71□□□□□ -0.69
PDE4D-208ENST00000502484 ATF3P18847 181 aa10.71□□□□□ -0.69
PDE4D-208ENST00000502484 NEUROD2Q15784 382 aa10.71□□□□□ -0.69
PDE4D-208ENST00000502484 RRP7AQ9Y3A4 280 aaKnown RBP10.71□□□□□ -0.69
PDE4D-208ENST00000502484 U2SURPO15042 1029 aaKnown RBP10.7□□□□□ -0.7
PDE4D-208ENST00000502484 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.7□□□□□ -0.7
PDE4D-208ENST00000502484 FMN2Q9NZ56 1722 aa10.7□□□□□ -0.7
PDE4D-208ENST00000502484 CADPS2Q86UW7 1296 aa10.69□□□□□ -0.7
PDE4D-208ENST00000502484 COG3Q96JB2 828 aa10.69□□□□□ -0.7
PDE4D-208ENST00000502484 USP6P35125 1406 aa10.69□□□□□ -0.7
PDE4D-208ENST00000502484 ACEP12821 1306 aa10.69□□□□□ -0.7
PDE4D-208ENST00000502484 PNNQ9H307 717 aaKnown RBP10.69□□□□□ -0.7
PDE4D-208ENST00000502484 UBAP1LF5GYI3 381 aa10.68□□□□□ -0.7
PDE4D-208ENST00000502484 TOM1O60784 492 aa10.68□□□□□ -0.7
PDE4D-208ENST00000502484 TTC21BQ7Z4L5 1316 aa10.68□□□□□ -0.7
PDE4D-208ENST00000502484 OVOS2A0A0J9YW53 1432 aa10.68□□□□□ -0.7
PDE4D-208ENST00000502484 DCCP43146 1447 aa10.68□□□□□ -0.7
PDE4D-208ENST00000502484 OVOS2Q6IE36 1432 aa10.68□□□□□ -0.7
PDE4D-208ENST00000502484 SSH2Q76I76 1423 aa10.68□□□□□ -0.7
PDE4D-208ENST00000502484 FBLN1P23142 703 aa10.68□□□□□ -0.7
PDE4D-208ENST00000502484 CRBNQ96SW2 442 aa10.68□□□□□ -0.7
PDE4D-208ENST00000502484 ZRANB1Q9UGI0 708 aa10.68□□□□□ -0.7
PDE4D-208ENST00000502484 MAPK8IP3Q9UPT6 1336 aa10.68□□□□□ -0.7
PDE4D-208ENST00000502484 NUTM2FA1L443 756 aa10.67□□□□□ -0.7
PDE4D-208ENST00000502484 FCHSD2O94868 740 aa10.67□□□□□ -0.7
PDE4D-208ENST00000502484 TMPOP42166 694 aaKnown RBP10.67□□□□□ -0.7
PDE4D-208ENST00000502484 EMILIN1Q9Y6C2 1016 aa10.67□□□□□ -0.7
PDE4D-208ENST00000502484 ANKARQ7Z5J8 1434 aa10.67□□□□□ -0.7
PDE4D-208ENST00000502484 C20orf194Q5TEA3 1177 aa10.67□□□□□ -0.7
PDE4D-208ENST00000502484 RBM19Q9Y4C8 960 aaKnown RBP10.67□□□□□ -0.7
PDE4D-208ENST00000502484 DLG5Q8TDM6 1919 aa10.67□□□□□ -0.7
PDE4D-208ENST00000502484 PPM1GO15355 546 aaPredicted RBP10.66□□□□□ -0.7
PDE4D-208ENST00000502484 SLAIN2Q9P270 581 aa10.66□□□□□ -0.7
PDE4D-208ENST00000502484 RSPH6AQ9H0K4 717 aa10.66□□□□□ -0.7
PDE4D-208ENST00000502484 BCAR3O75815 825 aa10.65□□□□□ -0.7
PDE4D-208ENST00000502484 IL13P35225 146 aa10.65□□□□□ -0.7
PDE4D-208ENST00000502484 PIP4K2BP78356 416 aa10.65□□□□□ -0.7
PDE4D-208ENST00000502484 MYH16Q9H6N6 1097 aa10.65□□□□□ -0.7
PDE4D-208ENST00000502484 TRIM35Q9UPQ4 493 aa10.65□□□□□ -0.7
PDE4D-208ENST00000502484 USP54Q70EL1 1684 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms