RNA–Protein interactions for RNA: ENST00000498872.2

AP004609.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP004609.1, Length 1,646 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004609.1-201ENST00000498872 NWD2Q9ULI1 1742 aa24.33■■□□□ 1.49
AP004609.1-201ENST00000498872 NEUROD1Q13562 356 aa24.32■■□□□ 1.48
AP004609.1-201ENST00000498872 TOPAZ1Q8N9V7 1692 aa24.31■■□□□ 1.48
AP004609.1-201ENST00000498872 CRYBG1Q9Y4K1 1723 aa24.31■■□□□ 1.48
AP004609.1-201ENST00000498872 FAM83GA6ND36 823 aa24.3■■□□□ 1.48
AP004609.1-201ENST00000498872 BRWD3Q6RI45 1802 aa24.29■■□□□ 1.48
AP004609.1-201ENST00000498872 CCDC9Q9Y3X0 531 aaKnown RBP24.29■■□□□ 1.48
AP004609.1-201ENST00000498872 QRICH2Q9H0J4 1663 aa24.29■■□□□ 1.48
AP004609.1-201ENST00000498872 NRAPQ86VF7 1730 aa24.26■■□□□ 1.47
AP004609.1-201ENST00000498872 TRPM1Q7Z4N2 1603 aa24.26■■□□□ 1.47
AP004609.1-201ENST00000498872 CENPJQ9HC77 1338 aaPredicted RBP24.26■■□□□ 1.47
AP004609.1-201ENST00000498872 VPS72Q15906 364 aa24.25■■□□□ 1.47
AP004609.1-201ENST00000498872 ACEP12821 1306 aa24.25■■□□□ 1.47
AP004609.1-201ENST00000498872 COL14A1Q05707 1796 aaKnown RBP24.25■■□□□ 1.47
AP004609.1-201ENST00000498872 ZNF316A6NFI3 1004 aaPredicted RBP24.24■■□□□ 1.47
AP004609.1-201ENST00000498872 NUTM2GQ5VZR2 741 aa24.24■■□□□ 1.47
AP004609.1-201ENST00000498872 BTG4Q9NY30 223 aa24.24■■□□□ 1.47
AP004609.1-201ENST00000498872 SRPK2P78362 688 aaKnown RBP24.24■■□□□ 1.47
AP004609.1-201ENST00000498872 CCDC61Q9Y6R9 512 aa24.24■■□□□ 1.47
AP004609.1-201ENST00000498872 CABP2Q9NPB3 220 aa24.23■■□□□ 1.47
AP004609.1-201ENST00000498872 PHRF1Q9P1Y6 1649 aaKnown RBP24.22■■□□□ 1.47
AP004609.1-201ENST00000498872 POLR3AO14802 1390 aaPredicted RBP24.22■■□□□ 1.47
AP004609.1-201ENST00000498872 NBPF8Q3BBV2 869 aa24.21■■□□□ 1.47
AP004609.1-201ENST00000498872 SEPT12Q8IYM1 358 aa24.21■■□□□ 1.47
AP004609.1-201ENST00000498872 PPIP5K1Q6PFW1 1433 aa24.2■■□□□ 1.46
AP004609.1-201ENST00000498872 A0A0G2JS52 829 aa24.18■■□□□ 1.46
AP004609.1-201ENST00000498872 PLEKHG3A1L390 1219 aa24.18■■□□□ 1.46
AP004609.1-201ENST00000498872 MYT1Q01538 1121 aa24.18■■□□□ 1.46
AP004609.1-201ENST00000498872 PRDM11Q9NQV5 511 aa24.18■■□□□ 1.46
AP004609.1-201ENST00000498872 ROCK2O75116 1388 aaKnown RBP24.17■■□□□ 1.46
AP004609.1-201ENST00000498872 KIAA0232Q92628 1395 aa24.16■■□□□ 1.46
AP004609.1-201ENST00000498872 CHRNA2Q15822 529 aa24.16■■□□□ 1.46
AP004609.1-201ENST00000498872 ZC3H6P61129 1189 aaKnown RBP24.15■■□□□ 1.46
AP004609.1-201ENST00000498872 FAM98CQ17RN3 349 aaKnown RBP24.15■■□□□ 1.46
AP004609.1-201ENST00000498872 ABTB2Q8N961 1025 aa24.14■■□□□ 1.46
AP004609.1-201ENST00000498872 ONECUT3O60422 494 aaPredicted RBP24.13■■□□□ 1.45
AP004609.1-201ENST00000498872 NRKQ7Z2Y5 1582 aa24.12■■□□□ 1.45
AP004609.1-201ENST00000498872 KRT27Q7Z3Y8 459 aa24.11■■□□□ 1.45
AP004609.1-201ENST00000498872 CABP1Q9NZU7 370 aa24.11■■□□□ 1.45
AP004609.1-201ENST00000498872 TIMELESSQ9UNS1 1208 aa24.11■■□□□ 1.45
AP004609.1-201ENST00000498872 DIEXFQ68CQ4 756 aaKnown RBP24.1■■□□□ 1.45
AP004609.1-201ENST00000498872 CCDC125Q86Z20 511 aa24.1■■□□□ 1.45
AP004609.1-201ENST00000498872 STRN4Q9NRL3 753 aa24.1■■□□□ 1.45
AP004609.1-201ENST00000498872 SPATA31A5Q5VU36 1347 aa24.09■■□□□ 1.45
AP004609.1-201ENST00000498872 SPATA31A7Q8IWB4 1347 aa24.09■■□□□ 1.45
AP004609.1-201ENST00000498872 EVC2Q86UK5 1308 aa24.08■■□□□ 1.45
AP004609.1-201ENST00000498872 BLMP54132 1417 aaPredicted RBP24.08■■□□□ 1.45
AP004609.1-201ENST00000498872 FAM182BQ5T319 152 aa24.06■■□□□ 1.44
AP004609.1-201ENST00000498872 USP6P35125 1406 aa24.05■■□□□ 1.44
AP004609.1-201ENST00000498872 DEFB132Q7Z7B7 95 aa24.05■■□□□ 1.44
AP004609.1-201ENST00000498872 NLRP13Q86W25 1043 aa24.04■■□□□ 1.44
AP004609.1-201ENST00000498872 USP35Q9P2H5 1018 aa24.04■■□□□ 1.44
AP004609.1-201ENST00000498872 SRCAPQ6ZRS2 3230 aa24.04■■□□□ 1.44
AP004609.1-201ENST00000498872 USP19O94966 1318 aa24.04■■□□□ 1.44
AP004609.1-201ENST00000498872 THSD7AQ9UPZ6 1657 aa24.04■■□□□ 1.44
AP004609.1-201ENST00000498872 TONSLQ96HA7 1378 aa24.03■■□□□ 1.44
AP004609.1-201ENST00000498872 CAMTA1Q9Y6Y1 1673 aa24.03■■□□□ 1.44
AP004609.1-201ENST00000498872 SPATA31A1Q5TZJ5 1347 aa24.02■■□□□ 1.44
AP004609.1-201ENST00000498872 PIK3C2AO00443 1686 aa24.02■■□□□ 1.44
AP004609.1-201ENST00000498872 LMO7Q8WWI1 1683 aa24.02■■□□□ 1.44
AP004609.1-201ENST00000498872 ZBTB7CA1YPR0 619 aa24.02■■□□□ 1.44
AP004609.1-201ENST00000498872 GCP02774 474 aa24.02■■□□□ 1.44
AP004609.1-201ENST00000498872 SF3B2Q13435 895 aaKnown RBP24.02■■□□□ 1.44
AP004609.1-201ENST00000498872 EVA1CP58658 441 aa24.01■■□□□ 1.43
AP004609.1-201ENST00000498872 NLRP6P59044 892 aa24.01■■□□□ 1.43
AP004609.1-201ENST00000498872 AKAP12Q02952 1782 aa24.01■■□□□ 1.43
AP004609.1-201ENST00000498872 CARD11Q9BXL7 1154 aa24.01■■□□□ 1.43
AP004609.1-201ENST00000498872 ZRANB1Q9UGI0 708 aa24.01■■□□□ 1.43
AP004609.1-201ENST00000498872 SSH2Q76I76 1423 aa24■■□□□ 1.43
AP004609.1-201ENST00000498872 CPDO75976 1380 aa23.99■■□□□ 1.43
AP004609.1-201ENST00000498872 BRD4O60885 1362 aaPredicted RBP23.98■■□□□ 1.43
AP004609.1-201ENST00000498872 LARP1Q6PKG0 1096 aaKnown RBP23.98■■□□□ 1.43
AP004609.1-201ENST00000498872 SLIT3O75094 1523 aa23.95■■□□□ 1.42
AP004609.1-201ENST00000498872 RGPD1P0DJD0 1748 aa23.94■■□□□ 1.42
AP004609.1-201ENST00000498872 COL5A2P05997 1499 aaPredicted RBP23.93■■□□□ 1.42
AP004609.1-201ENST00000498872 TTC21BQ7Z4L5 1316 aa23.93■■□□□ 1.42
AP004609.1-201ENST00000498872 SOX12O15370 315 aa23.92■■□□□ 1.42
AP004609.1-201ENST00000498872 ZNF692Q9BU19 519 aaPredicted RBP23.92■■□□□ 1.42
AP004609.1-201ENST00000498872 MON2Q7Z3U7 1717 aa23.91■■□□□ 1.42
AP004609.1-201ENST00000498872 KTN1Q86UP2 1357 aaKnown RBP23.91■■□□□ 1.42
AP004609.1-201ENST00000498872 CPSF1Q10570 1443 aaKnown RBP23.9■■□□□ 1.42
AP004609.1-201ENST00000498872 SBNO2Q9Y2G9 1366 aa23.9■■□□□ 1.42
AP004609.1-201ENST00000498872 TNS1Q9HBL0 1735 aaKnown RBP23.9■■□□□ 1.42
AP004609.1-201ENST00000498872 RGPD5Q99666 1765 aa23.9■■□□□ 1.42
AP004609.1-201ENST00000498872 BAG6P46379 1132 aa23.89■■□□□ 1.42
AP004609.1-201ENST00000498872 COL18A1P39060 1754 aa23.89■■□□□ 1.42
AP004609.1-201ENST00000498872 BARGINQ6ZT62 677 aa23.88■■□□□ 1.41
AP004609.1-201ENST00000498872 TCP11L2Q8N4U5 519 aa23.88■■□□□ 1.41
AP004609.1-201ENST00000498872 EN1Q05925 392 aaPredicted RBP23.87■■□□□ 1.41
AP004609.1-201ENST00000498872 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.87■■□□□ 1.41
AP004609.1-201ENST00000498872 TMC1Q8TDI8 760 aa23.87■■□□□ 1.41
AP004609.1-201ENST00000498872 AATKQ6ZMQ8 1374 aa23.86■■□□□ 1.41
AP004609.1-201ENST00000498872 TTC21AQ8NDW8 1320 aa23.86■■□□□ 1.41
AP004609.1-201ENST00000498872 CRB1P82279 1406 aa23.85■■□□□ 1.41
AP004609.1-201ENST00000498872 TRIM37O94972 964 aa23.85■■□□□ 1.41
AP004609.1-201ENST00000498872 PDE3BQ13370 1112 aa23.85■■□□□ 1.41
AP004609.1-201ENST00000498872 AXIN2Q9Y2T1 843 aa23.85■■□□□ 1.41
AP004609.1-201ENST00000498872 CD163L1Q9NR16 1453 aa23.85■■□□□ 1.41
AP004609.1-201ENST00000498872 PARP4Q9UKK3 1724 aaKnown RBP23.84■■□□□ 1.41
AP004609.1-201ENST00000498872 FAM196AQ6ZSG2 479 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms