RNA–Protein interactions for RNA: ENST00000498623.6

ARPC4-208, Transcript of actin related protein 2/3 complex subunit 4, human

TSL 2 BASIC

Gene ARPC4, Length 942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARPC4-208	ENST00000498623	ACE	P12821	1306 aa		32.74	■■■□□ 2.83
ARPC4-208	ENST00000498623	TONSL	Q96HA7	1378 aa		32.73	■■■□□ 2.83
ARPC4-208	ENST00000498623	GLI3	P10071	1580 aa		32.72	■■■□□ 2.83
ARPC4-208	ENST00000498623	SRPK2	P78362	688 aa	Known RBP	32.72	■■■□□ 2.83
ARPC4-208	ENST00000498623	UPF1	Q92900	1129 aa	Known RBP eCLIP	32.72	■■■□□ 2.83	2e-6	■■□□□ 14.5
ARPC4-208	ENST00000498623	GJD4	Q96KN9	370 aa	Predicted RBP	32.72	■■■□□ 2.83
ARPC4-208	ENST00000498623	COL14A1	Q05707	1796 aa	Known RBP	32.72	■■■□□ 2.83
ARPC4-208	ENST00000498623	PPIP5K1	Q6PFW1	1433 aa		32.71	■■■□□ 2.83
ARPC4-208	ENST00000498623	PHRF1	Q9P1Y6	1649 aa	Known RBP	32.7	■■■□□ 2.83
ARPC4-208	ENST00000498623	RALGAPB	Q86X10	1494 aa		32.7	■■■□□ 2.83
ARPC4-208	ENST00000498623	PAK3	O75914	559 aa	Predicted RBP	32.7	■■■□□ 2.83
ARPC4-208	ENST00000498623	NRAP	Q86VF7	1730 aa		32.7	■■■□□ 2.83
ARPC4-208	ENST00000498623	PLEKHG5	O94827	1062 aa		32.68	■■■□□ 2.82
ARPC4-208	ENST00000498623	CABP2	Q9NPB3	220 aa		32.68	■■■□□ 2.82
ARPC4-208	ENST00000498623	FAM83G	A6ND36	823 aa		32.66	■■■□□ 2.82
ARPC4-208	ENST00000498623	EVC2	Q86UK5	1308 aa		32.66	■■■□□ 2.82
ARPC4-208	ENST00000498623	BRD4	O60885	1362 aa	Predicted RBP	32.65	■■■□□ 2.82
ARPC4-208	ENST00000498623	VPS72	Q15906	364 aa		32.64	■■■□□ 2.82
ARPC4-208	ENST00000498623	SBNO2	Q9Y2G9	1366 aa		32.64	■■■□□ 2.82
ARPC4-208	ENST00000498623	ATAD2	Q6PL18	1390 aa		32.62	■■■□□ 2.81
ARPC4-208	ENST00000498623	NRK	Q7Z2Y5	1582 aa		32.58	■■■□□ 2.81
ARPC4-208	ENST00000498623	CARD11	Q9BXL7	1154 aa		32.58	■■■□□ 2.81
ARPC4-208	ENST00000498623	USP6	P35125	1406 aa		32.58	■■■□□ 2.81
ARPC4-208	ENST00000498623	CABP1	Q9NZU7	370 aa		32.57	■■■□□ 2.8
ARPC4-208	ENST00000498623	AKAP12	Q02952	1782 aa		32.57	■■■□□ 2.8
ARPC4-208	ENST00000498623	BRWD3	Q6RI45	1802 aa		32.56	■■■□□ 2.8
ARPC4-208	ENST00000498623	BTG4	Q9NY30	223 aa		32.55	■■■□□ 2.8
ARPC4-208	ENST00000498623	USP19	O94966	1318 aa		32.54	■■■□□ 2.8
ARPC4-208	ENST00000498623	ABTB2	Q8N961	1025 aa		32.54	■■■□□ 2.8
ARPC4-208	ENST00000498623	PRDM11	Q9NQV5	511 aa		32.53	■■■□□ 2.8
ARPC4-208	ENST00000498623	KIAA0232	Q92628	1395 aa		32.53	■■■□□ 2.8
ARPC4-208	ENST00000498623	SSH2	Q76I76	1423 aa		32.52	■■■□□ 2.8
ARPC4-208	ENST00000498623	ONECUT3	O60422	494 aa	Predicted RBP	32.52	■■■□□ 2.8
ARPC4-208	ENST00000498623	NUTM2G	Q5VZR2	741 aa		32.51	■■■□□ 2.79
ARPC4-208	ENST00000498623	CPD	O75976	1380 aa		32.48	■■■□□ 2.79
ARPC4-208	ENST00000498623	PIK3C2A	O00443	1686 aa		32.48	■■■□□ 2.79
ARPC4-208	ENST00000498623	NLRP13	Q86W25	1043 aa		32.48	■■■□□ 2.79
ARPC4-208	ENST00000498623	CCDC9	Q9Y3X0	531 aa	Known RBP	32.48	■■■□□ 2.79
ARPC4-208	ENST00000498623	LMO7	Q8WWI1	1683 aa		32.46	■■■□□ 2.79
ARPC4-208	ENST00000498623	EP400	Q96L91	3159 aa		32.46	■■■□□ 2.79
ARPC4-208	ENST00000498623	MON2	Q7Z3U7	1717 aa		32.46	■■■□□ 2.79
ARPC4-208	ENST00000498623	CPSF1	Q10570	1443 aa	Known RBP	32.45	■■■□□ 2.79
ARPC4-208	ENST00000498623	SEPT12	Q8IYM1	358 aa		32.45	■■■□□ 2.79
ARPC4-208	ENST00000498623	ZNF692	Q9BU19	519 aa	Predicted RBP	32.45	■■■□□ 2.79
ARPC4-208	ENST00000498623	SLIT3	O75094	1523 aa		32.45	■■■□□ 2.78
ARPC4-208	ENST00000498623	ZC3H6	P61129	1189 aa	Known RBP	32.43	■■■□□ 2.78
ARPC4-208	ENST00000498623	SPATA31A5	Q5VU36	1347 aa		32.43	■■■□□ 2.78
ARPC4-208	ENST00000498623	SPATA31A7	Q8IWB4	1347 aa		32.43	■■■□□ 2.78
ARPC4-208	ENST00000498623	CHRNA2	Q15822	529 aa		32.41	■■■□□ 2.78
ARPC4-208	ENST00000498623	CLSPN	Q9HAW4	1339 aa		32.41	■■■□□ 2.78
ARPC4-208	ENST00000498623	THSD7A	Q9UPZ6	1657 aa		32.4	■■■□□ 2.78
ARPC4-208	ENST00000498623	GC	P02774	474 aa		32.4	■■■□□ 2.78
ARPC4-208	ENST00000498623	CCDC125	Q86Z20	511 aa		32.39	■■■□□ 2.78
ARPC4-208	ENST00000498623	CAMTA1	Q9Y6Y1	1673 aa		32.39	■■■□□ 2.78
ARPC4-208	ENST00000498623	NLRP6	P59044	892 aa		32.37	■■■□□ 2.77
ARPC4-208	ENST00000498623	PUS7	Q96PZ0	661 aa	Known RBP	32.37	■■■□□ 2.77
ARPC4-208	ENST00000498623	TTC21B	Q7Z4L5	1316 aa		32.36	■■■□□ 2.77
ARPC4-208	ENST00000498623	TTC21A	Q8NDW8	1320 aa		32.36	■■■□□ 2.77
ARPC4-208	ENST00000498623	FAM98C	Q17RN3	349 aa	Known RBP	32.35	■■■□□ 2.77
ARPC4-208	ENST00000498623	CD163L1	Q9NR16	1453 aa		32.35	■■■□□ 2.77
ARPC4-208	ENST00000498623	KTN1	Q86UP2	1357 aa	Known RBP	32.34	■■■□□ 2.77
ARPC4-208	ENST00000498623	SPATA31A1	Q5TZJ5	1347 aa		32.34	■■■□□ 2.77
ARPC4-208	ENST00000498623	TIMELESS	Q9UNS1	1208 aa		32.34	■■■□□ 2.77
ARPC4-208	ENST00000498623	USP54	Q70EL1	1684 aa		32.34	■■■□□ 2.77
ARPC4-208	ENST00000498623	KRT27	Q7Z3Y8	459 aa		32.33	■■■□□ 2.77
ARPC4-208	ENST00000498623	TESK2	Q96S53	571 aa		32.32	■■■□□ 2.76
ARPC4-208	ENST00000498623	SLC24A1	O60721	1099 aa		32.31	■■■□□ 2.76
ARPC4-208	ENST00000498623	STRN4	Q9NRL3	753 aa		32.31	■■■□□ 2.76
ARPC4-208	ENST00000498623	BLM	P54132	1417 aa	Predicted RBP	32.31	■■■□□ 2.76
ARPC4-208	ENST00000498623	COL18A1	P39060	1754 aa		32.3	■■■□□ 2.76
ARPC4-208	ENST00000498623	ST20-MTHFS	A0A0A6YYL1	179 aa		32.3	■■■□□ 2.76
ARPC4-208	ENST00000498623	COL5A2	P05997	1499 aa	Predicted RBP	32.29	■■■□□ 2.76
ARPC4-208	ENST00000498623	AATK	Q6ZMQ8	1374 aa		32.29	■■■□□ 2.76
ARPC4-208	ENST00000498623		A0A0G2JS52	829 aa		32.28	■■■□□ 2.76
ARPC4-208	ENST00000498623	MYT1	Q01538	1121 aa		32.28	■■■□□ 2.76
ARPC4-208	ENST00000498623	EVA1C	P58658	441 aa		32.26	■■■□□ 2.75
ARPC4-208	ENST00000498623	PCGF6	Q9BYE7	350 aa		32.26	■■■□□ 2.75
ARPC4-208	ENST00000498623	NINL	Q9Y2I6	1382 aa		32.26	■■■□□ 2.75
ARPC4-208	ENST00000498623	KCNH5	Q8NCM2	988 aa		32.25	■■■□□ 2.75
ARPC4-208	ENST00000498623	NFAT5	O94916	1531 aa		32.25	■■■□□ 2.75
ARPC4-208	ENST00000498623	USP31	Q70CQ4	1352 aa		32.24	■■■□□ 2.75
ARPC4-208	ENST00000498623	USP47	Q96K76	1375 aa		32.24	■■■□□ 2.75
ARPC4-208	ENST00000498623	BARGIN	Q6ZT62	677 aa		32.23	■■■□□ 2.75
ARPC4-208	ENST00000498623	TMC1	Q8TDI8	760 aa		32.23	■■■□□ 2.75
ARPC4-208	ENST00000498623	SLC12A5	Q9H2X9	1139 aa		32.23	■■■□□ 2.75
ARPC4-208	ENST00000498623	EDC4	Q6P2E9	1401 aa	Known RBP	32.23	■■■□□ 2.75
ARPC4-208	ENST00000498623	LARP1	Q6PKG0	1096 aa	Known RBP	32.22	■■■□□ 2.75
ARPC4-208	ENST00000498623	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	32.22	■■■□□ 2.75
ARPC4-208	ENST00000498623	TERF2IP	Q9NYB0	399 aa		32.21	■■■□□ 2.75
ARPC4-208	ENST00000498623	ABCC6	O95255	1503 aa		32.21	■■■□□ 2.75
ARPC4-208	ENST00000498623		A0A1W2PP64	1363 aa		32.2	■■■□□ 2.75
ARPC4-208	ENST00000498623	CRB1	P82279	1406 aa		32.19	■■■□□ 2.74
ARPC4-208	ENST00000498623	ARHGEF25	Q86VW2	580 aa		32.19	■■■□□ 2.74
ARPC4-208	ENST00000498623	RGPD1	P0DJD0	1748 aa		32.19	■■■□□ 2.74
ARPC4-208	ENST00000498623	RGPD5	Q99666	1765 aa		32.19	■■■□□ 2.74
ARPC4-208	ENST00000498623	PARP4	Q9UKK3	1724 aa	Known RBP	32.18	■■■□□ 2.74
ARPC4-208	ENST00000498623	THRAP3	Q9Y2W1	955 aa	Known RBP	32.18	■■■□□ 2.74
ARPC4-208	ENST00000498623	TCP11L2	Q8N4U5	519 aa		32.17	■■■□□ 2.74
ARPC4-208	ENST00000498623	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	32.16	■■■□□ 2.74
ARPC4-208	ENST00000498623	USP35	Q9P2H5	1018 aa		32.16	■■■□□ 2.74

Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms