RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 ZNF511Q8NB15 262 aa10.06□□□□□ -0.8
SSR3-209ENST00000498205 GPSM3Q9Y4H4 160 aa10.06□□□□□ -0.8
SSR3-209ENST00000498205 PDXDC2PQ6P474 469 aa10.05□□□□□ -0.8
SSR3-209ENST00000498205 BPHLQ86WA6 291 aaPredicted RBP10.05□□□□□ -0.8
SSR3-209ENST00000498205 NDUFB9Q9Y6M9 179 aa10.05□□□□□ -0.8
SSR3-209ENST00000498205 WNT7AO00755 349 aa10.04□□□□□ -0.8
SSR3-209ENST00000498205 PRR20EP86478 221 aa10.04□□□□□ -0.8
SSR3-209ENST00000498205 PRR20CP86479 221 aa10.04□□□□□ -0.8
SSR3-209ENST00000498205 PRR20DP86480 221 aa10.04□□□□□ -0.8
SSR3-209ENST00000498205 PRR20BP86481 221 aa10.04□□□□□ -0.8
SSR3-209ENST00000498205 PRR20AP86496 221 aa10.04□□□□□ -0.8
SSR3-209ENST00000498205 MTMR14Q8NCE2 650 aa10.04□□□□□ -0.8
SSR3-209ENST00000498205 BAP1Q92560 729 aa10.04□□□□□ -0.8
SSR3-209ENST00000498205 GJD4Q96KN9 370 aaPredicted RBP10.04□□□□□ -0.8
SSR3-209ENST00000498205 HMX1Q9NP08 348 aaPredicted RBP10.04□□□□□ -0.8
SSR3-209ENST00000498205 VARSP26640 1264 aaKnown RBP10.03□□□□□ -0.8
SSR3-209ENST00000498205 MCM6Q14566 821 aa10.03□□□□□ -0.8
SSR3-209ENST00000498205 LAPTM4AQ15012 233 aa10.03□□□□□ -0.8
SSR3-209ENST00000498205 SH3BP2P78314 561 aa10.02□□□□□ -0.81
SSR3-209ENST00000498205 ZNF592Q92610 1267 aa10.02□□□□□ -0.81
SSR3-209ENST00000498205 TRIM34Q9BYJ4 488 aa10.02□□□□□ -0.81
SSR3-209ENST00000498205 SNRKQ9NRH2 765 aa10.02□□□□□ -0.81
SSR3-209ENST00000498205 PTK2Q05397 1052 aa10.01□□□□□ -0.81
SSR3-209ENST00000498205 LINC01559Q495D7 138 aa10□□□□□ -0.81
SSR3-209ENST00000498205 RC3H1Q5TC82 1133 aaKnown RBP10□□□□□ -0.81
SSR3-209ENST00000498205 EHBP1Q8NDI1 1231 aa10□□□□□ -0.81
SSR3-209ENST00000498205 SKOR1P84550 965 aa9.99□□□□□ -0.81
SSR3-209ENST00000498205 AGERQ15109 404 aa9.99□□□□□ -0.81
SSR3-209ENST00000498205 RAD21O60216 631 aa9.98□□□□□ -0.81
SSR3-209ENST00000498205 GDF9O60383 454 aa9.98□□□□□ -0.81
SSR3-209ENST00000498205 SH3BP5LQ7L8J4 393 aa9.98□□□□□ -0.81
SSR3-209ENST00000498205 SH3RF1Q7Z6J0 888 aa9.98□□□□□ -0.81
SSR3-209ENST00000498205 WWC1Q8IX03 1113 aa9.98□□□□□ -0.81
SSR3-209ENST00000498205 MPNDQ8N594 471 aa9.98□□□□□ -0.81
SSR3-209ENST00000498205 FAM174AQ8TBP5 190 aa9.98□□□□□ -0.81
SSR3-209ENST00000498205 EPS8L1Q8TE68 723 aa9.98□□□□□ -0.81
SSR3-209ENST00000498205 ZNF330Q9Y3S2 320 aaPredicted RBP9.98□□□□□ -0.81
SSR3-209ENST00000498205 ARHGAP9Q9BRR9 750 aa9.97□□□□□ -0.81
SSR3-209ENST00000498205 PKD2L1Q9P0L9 805 aa9.97□□□□□ -0.81
SSR3-209ENST00000498205 CDV3Q9UKY7 258 aaKnown RBP9.97□□□□□ -0.81
SSR3-209ENST00000498205 UBTFP17480 764 aaKnown RBP9.96□□□□□ -0.82
SSR3-209ENST00000498205 FOXC1Q12948 553 aa9.96□□□□□ -0.82
SSR3-209ENST00000498205 SNIP1Q8TAD8 396 aaKnown RBP9.96□□□□□ -0.82
SSR3-209ENST00000498205 PDZRN3Q9UPQ7 1066 aa9.96□□□□□ -0.82
SSR3-209ENST00000498205 GTF3C3Q9Y5Q9 886 aa9.96□□□□□ -0.82
SSR3-209ENST00000498205 ZBBXA8MT70 800 aa9.95□□□□□ -0.82
SSR3-209ENST00000498205 MCCD1P59942 119 aaPredicted RBP9.95□□□□□ -0.82
SSR3-209ENST00000498205 ZBTB33Q86T24 672 aa9.95□□□□□ -0.82
SSR3-209ENST00000498205 CYP4X1Q8N118 509 aa9.95□□□□□ -0.82
SSR3-209ENST00000498205 MRGPRX2Q96LB1 330 aa9.95□□□□□ -0.82
SSR3-209ENST00000498205 IRX2Q9BZI1 471 aaPredicted RBP9.95□□□□□ -0.82
SSR3-209ENST00000498205 NRG2O14511 850 aaPredicted RBP9.94□□□□□ -0.82
SSR3-209ENST00000498205 TRMT44Q8IYL2 757 aaKnown RBP9.94□□□□□ -0.82
SSR3-209ENST00000498205 FOXJ1Q92949 421 aa9.94□□□□□ -0.82
SSR3-209ENST00000498205 WASHC4Q2M389 1173 aa9.93□□□□□ -0.82
SSR3-209ENST00000498205 C1QTNF2Q9BXJ5 285 aa9.93□□□□□ -0.82
SSR3-209ENST00000498205 MAGEB6P1A0A0J9YX57 407 aa9.92□□□□□ -0.82
SSR3-209ENST00000498205 TTC24A2A3L6 582 aaPredicted RBP9.92□□□□□ -0.82
SSR3-209ENST00000498205 GFRA3O60609 400 aa9.92□□□□□ -0.82
SSR3-209ENST00000498205 TRIM67Q6ZTA4 783 aa9.92□□□□□ -0.82
SSR3-209ENST00000498205 TBC1D2BQ9UPU7 963 aa9.92□□□□□ -0.82
SSR3-209ENST00000498205 MAP4K5Q9Y4K4 846 aa9.92□□□□□ -0.82
SSR3-209ENST00000498205 TNFRSF10AO00220 468 aa9.91□□□□□ -0.82
SSR3-209ENST00000498205 SIAH2O43255 324 aa9.91□□□□□ -0.82
SSR3-209ENST00000498205 NR1H3Q13133 447 aa9.91□□□□□ -0.82
SSR3-209ENST00000498205 TOR4AQ9NXH8 423 aa9.91□□□□□ -0.82
SSR3-209ENST00000498205 ERICH6Q7L0X2 663 aa9.9□□□□□ -0.82
SSR3-209ENST00000498205 TRIM52Q96A61 297 aa9.9□□□□□ -0.82
SSR3-209ENST00000498205 SLC10A4Q96EP9 437 aa9.9□□□□□ -0.82
SSR3-209ENST00000498205 CDK15Q96Q40 435 aa9.9□□□□□ -0.82
SSR3-209ENST00000498205 GDPD2Q9HCC8 539 aa9.9□□□□□ -0.82
SSR3-209ENST00000498205 COG6Q9Y2V7 657 aa9.9□□□□□ -0.82
SSR3-209ENST00000498205 NBPF20Q3BBV1 942 aa9.89□□□□□ -0.83
SSR3-209ENST00000498205 ERFEQ4G0M1 354 aa9.89□□□□□ -0.83
SSR3-209ENST00000498205 C4orf48Q5BLP8 95 aa9.89□□□□□ -0.83
SSR3-209ENST00000498205 CARD14Q9BXL6 1004 aa9.89□□□□□ -0.83
SSR3-209ENST00000498205 ABL2P42684 1182 aa9.88□□□□□ -0.83
SSR3-209ENST00000498205 CCDC125Q86Z20 511 aa9.88□□□□□ -0.83
SSR3-209ENST00000498205 ADAM32Q8TC27 787 aa9.88□□□□□ -0.83
SSR3-209ENST00000498205 GPR37L1O60883 481 aa9.87□□□□□ -0.83
SSR3-209ENST00000498205 DGAT1O75907 488 aa9.87□□□□□ -0.83
SSR3-209ENST00000498205 SOX11P35716 441 aa9.87□□□□□ -0.83
SSR3-209ENST00000498205 EIF4G2P78344 907 aaKnown RBP eCLIP9.87□□□□□ -0.83
SSR3-209ENST00000498205 WASF2Q9Y6W5 498 aa9.87□□□□□ -0.83
SSR3-209ENST00000498205 ADH1CP00326 375 aa9.86□□□□□ -0.83
SSR3-209ENST00000498205 ALDH1A1P00352 501 aa9.86□□□□□ -0.83
SSR3-209ENST00000498205 FBXO45P0C2W1 286 aa9.86□□□□□ -0.83
SSR3-209ENST00000498205 NR5A1Q13285 461 aa9.86□□□□□ -0.83
SSR3-209ENST00000498205 DZIP3Q86Y13 1208 aaKnown RBP9.86□□□□□ -0.83
SSR3-209ENST00000498205 A6NJR5 290 aa9.85□□□□□ -0.83
SSR3-209ENST00000498205 PKDCCQ504Y2 493 aa9.85□□□□□ -0.83
SSR3-209ENST00000498205 VASH1Q7L8A9 365 aaPredicted RBP9.85□□□□□ -0.83
SSR3-209ENST00000498205 OCSTAMPQ9BR26 566 aa9.85□□□□□ -0.83
SSR3-209ENST00000498205 FAM187AA6NFU0 413 aa9.83□□□□□ -0.84
SSR3-209ENST00000498205 IRF5Q13568 498 aa9.83□□□□□ -0.84
SSR3-209ENST00000498205 ARID5BQ14865 1188 aa9.83□□□□□ -0.84
SSR3-209ENST00000498205 SEPT12Q8IYM1 358 aa9.83□□□□□ -0.84
SSR3-209ENST00000498205 TLL2Q9Y6L7 1015 aa9.83□□□□□ -0.84
SSR3-209ENST00000498205 CTC1Q2NKJ3 1217 aa9.82□□□□□ -0.84
SSR3-209ENST00000498205 AVPP01185 164 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 885.1 ms