RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 SCAPERQ9BY12 1400 aa12.88□□□□□ -0.35
VPS45-210ENST00000497638 ZPR1O75312 459 aa12.87□□□□□ -0.35
VPS45-210ENST00000497638 Q6ZNB5 142 aa12.86□□□□□ -0.35
VPS45-210ENST00000497638 BLOC1S3Q6QNY0 202 aa12.85□□□□□ -0.35
VPS45-210ENST00000497638 PXYLP1Q8TE99 480 aa12.85□□□□□ -0.35
VPS45-210ENST00000497638 PLCH2O75038 1416 aa12.85□□□□□ -0.35
VPS45-210ENST00000497638 CFHP08603 1231 aa12.84□□□□□ -0.35
VPS45-210ENST00000497638 CEBPAP49715 358 aaPredicted RBP12.84□□□□□ -0.35
VPS45-210ENST00000497638 LTBP4Q8N2S1 1624 aa12.84□□□□□ -0.35
VPS45-210ENST00000497638 GNPATO15228 680 aa12.83□□□□□ -0.36
VPS45-210ENST00000497638 ZNF518AQ6AHZ1 1483 aa12.81□□□□□ -0.36
VPS45-210ENST00000497638 ACTN4O43707 911 aaKnown RBP12.81□□□□□ -0.36
VPS45-210ENST00000497638 GFRA3O60609 400 aa12.81□□□□□ -0.36
VPS45-210ENST00000497638 LAPTM4AQ15012 233 aa12.81□□□□□ -0.36
VPS45-210ENST00000497638 METTL3Q86U44 580 aaKnown RBP12.81□□□□□ -0.36
VPS45-210ENST00000497638 V9GY48 417 aaPredicted RBP12.81□□□□□ -0.36
VPS45-210ENST00000497638 SLC10A3P09131 477 aa12.8□□□□□ -0.36
VPS45-210ENST00000497638 FECHP22830 423 aa12.8□□□□□ -0.36
VPS45-210ENST00000497638 RSPH4AQ5TD94 716 aa12.8□□□□□ -0.36
VPS45-210ENST00000497638 TMUB1Q9BVT8 246 aa12.8□□□□□ -0.36
VPS45-210ENST00000497638 KDM2AQ9Y2K7 1162 aa12.8□□□□□ -0.36
VPS45-210ENST00000497638 REREQ9P2R6 1566 aa12.8□□□□□ -0.36
VPS45-210ENST00000497638 KDM5CP41229 1560 aa12.79□□□□□ -0.36
VPS45-210ENST00000497638 EFCAB2Q5VUJ9 269 aa12.79□□□□□ -0.36
VPS45-210ENST00000497638 MYO5CQ9NQX4 1742 aa12.79□□□□□ -0.36
VPS45-210ENST00000497638 NCOA1Q15788 1441 aa12.79□□□□□ -0.36
VPS45-210ENST00000497638 CDK13Q14004 1512 aaKnown RBP12.78□□□□□ -0.36
VPS45-210ENST00000497638 C3P01024 1663 aa12.78□□□□□ -0.36
VPS45-210ENST00000497638 TRAPPC8Q9Y2L5 1435 aa12.77□□□□□ -0.37
VPS45-210ENST00000497638 DIP2CQ9Y2E4 1556 aa12.77□□□□□ -0.37
VPS45-210ENST00000497638 TLL1O43897 1013 aa12.76□□□□□ -0.37
VPS45-210ENST00000497638 AGLP35573 1532 aa12.75□□□□□ -0.37
VPS45-210ENST00000497638 GPIHBP1Q8IV16 184 aa12.75□□□□□ -0.37
VPS45-210ENST00000497638 CNTLNQ9NXG0 1405 aa12.74□□□□□ -0.37
VPS45-210ENST00000497638 GPR37O15354 613 aa12.74□□□□□ -0.37
VPS45-210ENST00000497638 RANGAP1P46060 587 aaPredicted RBP12.74□□□□□ -0.37
VPS45-210ENST00000497638 ESF1Q9H501 851 aaKnown RBP12.74□□□□□ -0.37
VPS45-210ENST00000497638 NR1I2O75469 434 aa12.73□□□□□ -0.37
VPS45-210ENST00000497638 ABCA6Q8N139 1617 aa12.73□□□□□ -0.37
VPS45-210ENST00000497638 ARHGAP5Q13017 1502 aa12.72□□□□□ -0.37
VPS45-210ENST00000497638 MLH3Q9UHC1 1453 aa12.72□□□□□ -0.37
VPS45-210ENST00000497638 RNF223E7ERA6 249 aa12.72□□□□□ -0.37
VPS45-210ENST00000497638 RDH13Q8NBN7 331 aa12.72□□□□□ -0.37
VPS45-210ENST00000497638 DAXXQ9UER7 740 aaPredicted RBP12.72□□□□□ -0.37
VPS45-210ENST00000497638 KIF14Q15058 1648 aa12.72□□□□□ -0.37
VPS45-210ENST00000497638 NPATQ14207 1427 aa12.71□□□□□ -0.37
VPS45-210ENST00000497638 EEA1Q15075 1411 aa12.71□□□□□ -0.37
VPS45-210ENST00000497638 UBAP1LF5GYI3 381 aa12.71□□□□□ -0.37
VPS45-210ENST00000497638 AFAP1Q8N556 730 aa12.71□□□□□ -0.37
VPS45-210ENST00000497638 CDK11AQ9UQ88 783 aaPredicted RBP12.71□□□□□ -0.37
VPS45-210ENST00000497638 CAMSAP1Q5T5Y3 1602 aa12.7□□□□□ -0.38
VPS45-210ENST00000497638 VSIG10Q8N0Z9 540 aa12.7□□□□□ -0.38
VPS45-210ENST00000497638 DDX11L8A8MPP1 907 aa12.69□□□□□ -0.38
VPS45-210ENST00000497638 TULP1O00294 542 aaPredicted RBP12.69□□□□□ -0.38
VPS45-210ENST00000497638 NRG2O14511 850 aaPredicted RBP12.69□□□□□ -0.38
VPS45-210ENST00000497638 S1PR4O95977 384 aa12.69□□□□□ -0.38
VPS45-210ENST00000497638 PUS10Q3MIT2 529 aaKnown RBP12.69□□□□□ -0.38
VPS45-210ENST00000497638 NLRP7Q8WX94 980 aa12.69□□□□□ -0.38
VPS45-210ENST00000497638 MROH2AA6NES4 1674 aa12.68□□□□□ -0.38
VPS45-210ENST00000497638 PPEF1O14829 653 aaPredicted RBP12.68□□□□□ -0.38
VPS45-210ENST00000497638 SCUBE3Q8IX30 993 aa12.68□□□□□ -0.38
VPS45-210ENST00000497638 PDZRN3Q9UPQ7 1066 aa12.68□□□□□ -0.38
VPS45-210ENST00000497638 CLIP1P30622 1438 aa12.68□□□□□ -0.38
VPS45-210ENST00000497638 TROQ12816 1431 aaPredicted RBP12.68□□□□□ -0.38
VPS45-210ENST00000497638 FMN1Q68DA7 1419 aa12.68□□□□□ -0.38
VPS45-210ENST00000497638 ZNF335Q9H4Z2 1342 aaPredicted RBP12.67□□□□□ -0.38
VPS45-210ENST00000497638 PLA2R1Q13018 1463 aa12.67□□□□□ -0.38
VPS45-210ENST00000497638 ADH1BP00325 375 aa12.67□□□□□ -0.38
VPS45-210ENST00000497638 SLC19A1P41440 591 aa12.67□□□□□ -0.38
VPS45-210ENST00000497638 ABCC1P33527 1531 aa12.66□□□□□ -0.38
VPS45-210ENST00000497638 MED1Q15648 1581 aaPredicted RBP12.65□□□□□ -0.38
VPS45-210ENST00000497638 ZNF142P52746 1687 aaPredicted RBP12.65□□□□□ -0.38
VPS45-210ENST00000497638 TRAF7Q6Q0C0 670 aa12.65□□□□□ -0.38
VPS45-210ENST00000497638 ANKLE1Q8NAG6 615 aa12.65□□□□□ -0.38
VPS45-210ENST00000497638 SLC6A16Q9GZN6 736 aa12.65□□□□□ -0.38
VPS45-210ENST00000497638 SULF1Q8IWU6 871 aa12.64□□□□□ -0.39
VPS45-210ENST00000497638 CDC42BPBQ9Y5S2 1711 aa12.64□□□□□ -0.39
VPS45-210ENST00000497638 TCOF1Q13428 1488 aaKnown RBP12.64□□□□□ -0.39
VPS45-210ENST00000497638 ITSN2Q9NZM3 1697 aa12.64□□□□□ -0.39
VPS45-210ENST00000497638 KIDINS220Q9ULH0 1771 aa12.64□□□□□ -0.39
VPS45-210ENST00000497638 PHOX2BQ99453 314 aa12.63□□□□□ -0.39
VPS45-210ENST00000497638 PREX2Q70Z35 1606 aa12.62□□□□□ -0.39
VPS45-210ENST00000497638 SPSB2Q99619 263 aa12.62□□□□□ -0.39
VPS45-210ENST00000497638 ATP1B4Q9UN42 357 aaPredicted RBP12.62□□□□□ -0.39
VPS45-210ENST00000497638 MYO3AQ8NEV4 1616 aa12.62□□□□□ -0.39
VPS45-210ENST00000497638 CEP170BQ9Y4F5 1589 aaPredicted RBP12.61□□□□□ -0.39
VPS45-210ENST00000497638 ZMYM3Q14202 1370 aa12.61□□□□□ -0.39
VPS45-210ENST00000497638 SUPT6HQ7KZ85 1726 aaKnown RBP12.6□□□□□ -0.39
VPS45-210ENST00000497638 FUT2Q10981 343 aa12.6□□□□□ -0.39
VPS45-210ENST00000497638 HSPA1LP34931 641 aa12.59□□□□□ -0.39
VPS45-210ENST00000497638 ATP6V1AP38606 617 aa12.59□□□□□ -0.39
VPS45-210ENST00000497638 SPRYD7Q5W111 196 aa12.59□□□□□ -0.39
VPS45-210ENST00000497638 GCGRP47871 477 aa12.58□□□□□ -0.4
VPS45-210ENST00000497638 MORN1Q5T089 497 aa12.58□□□□□ -0.4
VPS45-210ENST00000497638 EMID1Q96A84 441 aaPredicted RBP12.58□□□□□ -0.4
VPS45-210ENST00000497638 CPS1P31327 1500 aa12.57□□□□□ -0.4
VPS45-210ENST00000497638 SAMD9LQ8IVG5 1584 aa12.57□□□□□ -0.4
VPS45-210ENST00000497638 PTPRKQ15262 1439 aa12.57□□□□□ -0.4
VPS45-210ENST00000497638 TOM1O60784 492 aa12.57□□□□□ -0.4
VPS45-210ENST00000497638 ARHGAP35Q9NRY4 1499 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms