RNA–Protein interactions for RNA: ENST00000497380.1

USP13-205, Transcript of ubiquitin specific peptidase 13, humanhuman

TSL 3

Gene USP13, Length 509 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-205ENST00000497380 USP6P35125 1406 aa14.28□□□□□ -0.12
USP13-205ENST00000497380 KRT28Q7Z3Y7 464 aa14.28□□□□□ -0.12
USP13-205ENST00000497380 NPC1L1Q9UHC9 1359 aa14.28□□□□□ -0.12
USP13-205ENST00000497380 NSD2O96028 1365 aa14.27□□□□□ -0.12
USP13-205ENST00000497380 AKAP12Q02952 1782 aa14.27□□□□□ -0.13
USP13-205ENST00000497380 TTC21BQ7Z4L5 1316 aa14.26□□□□□ -0.13
USP13-205ENST00000497380 PAK3O75914 559 aaPredicted RBP14.25□□□□□ -0.13
USP13-205ENST00000497380 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.25□□□□□ -0.131e-6■■■■□ 20.1
USP13-205ENST00000497380 MON2Q7Z3U7 1717 aa14.24□□□□□ -0.13
USP13-205ENST00000497380 RALBP1Q15311 655 aa14.24□□□□□ -0.13
USP13-205ENST00000497380 AMER1Q5JTC6 1135 aaPredicted RBP14.24□□□□□ -0.13
USP13-205ENST00000497380 RGS17Q9UGC6 210 aaPredicted RBP14.24□□□□□ -0.13
USP13-205ENST00000497380 SBNO1A3KN83 1393 aa14.23□□□□□ -0.13
USP13-205ENST00000497380 FYB1O15117 783 aa14.23□□□□□ -0.13
USP13-205ENST00000497380 ABTB2Q8N961 1025 aa14.23□□□□□ -0.13
USP13-205ENST00000497380 SSH2Q76I76 1423 aa14.23□□□□□ -0.13
USP13-205ENST00000497380 CC2D1BQ5T0F9 858 aaKnown RBP14.22□□□□□ -0.13
USP13-205ENST00000497380 MORC1Q86VD1 984 aa14.22□□□□□ -0.13
USP13-205ENST00000497380 NLRP13Q86W25 1043 aa14.22□□□□□ -0.13
USP13-205ENST00000497380 COG3Q96JB2 828 aa14.22□□□□□ -0.13
USP13-205ENST00000497380 SOS2Q07890 1332 aaPredicted RBP14.21□□□□□ -0.13
USP13-205ENST00000497380 ROBO1Q9Y6N7 1651 aa14.2□□□□□ -0.14
USP13-205ENST00000497380 NLRP6P59044 892 aa14.2□□□□□ -0.14
USP13-205ENST00000497380 XPCQ01831 940 aaPredicted RBP14.2□□□□□ -0.14
USP13-205ENST00000497380 LRRC59Q96AG4 307 aaKnown RBP14.2□□□□□ -0.14
USP13-205ENST00000497380 GGNBP2Q9H3C7 697 aa14.2□□□□□ -0.14
USP13-205ENST00000497380 PRKRIP1Q9H875 184 aaPredicted RBP14.2□□□□□ -0.14
USP13-205ENST00000497380 ARHGEF10O15013 1369 aa14.2□□□□□ -0.14
USP13-205ENST00000497380 CNGB1Q14028 1251 aaPredicted RBP14.19□□□□□ -0.14
USP13-205ENST00000497380 LMOD2Q6P5Q4 547 aa14.19□□□□□ -0.14
USP13-205ENST00000497380 NME9Q86XW9 330 aa14.19□□□□□ -0.14
USP13-205ENST00000497380 DDX17Q92841 729 aaKnown RBP14.19□□□□□ -0.14
USP13-205ENST00000497380 USP31Q70CQ4 1352 aa14.19□□□□□ -0.14
USP13-205ENST00000497380 PXDNQ92626 1479 aa14.18□□□□□ -0.14
USP13-205ENST00000497380 SPATA31A3Q5VYP0 1347 aa14.18□□□□□ -0.14
USP13-205ENST00000497380 NRKQ7Z2Y5 1582 aa14.18□□□□□ -0.14
USP13-205ENST00000497380 NHSL1Q5SYE7 1610 aa14.18□□□□□ -0.14
USP13-205ENST00000497380 TNS3Q68CZ2 1445 aa14.17□□□□□ -0.14
USP13-205ENST00000497380 AHDC1Q5TGY3 1603 aaPredicted RBP14.17□□□□□ -0.14
USP13-205ENST00000497380 KCNH5Q8NCM2 988 aa14.17□□□□□ -0.14
USP13-205ENST00000497380 PARD3Q8TEW0 1356 aa14.17□□□□□ -0.14
USP13-205ENST00000497380 KIF20BQ96Q89 1820 aa14.17□□□□□ -0.14
USP13-205ENST00000497380 MYBBP1AQ9BQG0 1328 aaKnown RBP14.15□□□□□ -0.14
USP13-205ENST00000497380 TRPM3Q9HCF6 1732 aaPredicted RBP14.15□□□□□ -0.14
USP13-205ENST00000497380 OVOS2A0A0J9YW53 1432 aa14.15□□□□□ -0.14
USP13-205ENST00000497380 OVOS2Q6IE36 1432 aa14.15□□□□□ -0.14
USP13-205ENST00000497380 POTEAQ6S8J7 498 aa14.14□□□□□ -0.15
USP13-205ENST00000497380 ANKRD26Q9UPS8 1709 aa14.14□□□□□ -0.15
USP13-205ENST00000497380 AATKQ6ZMQ8 1374 aa14.13□□□□□ -0.15
USP13-205ENST00000497380 NUTM2GQ5VZR2 741 aa14.13□□□□□ -0.15
USP13-205ENST00000497380 PIK3C2AO00443 1686 aa14.12□□□□□ -0.15
USP13-205ENST00000497380 ALS2Q96Q42 1657 aa14.12□□□□□ -0.15
USP13-205ENST00000497380 CCER2I3L3R5 266 aa14.12□□□□□ -0.15
USP13-205ENST00000497380 TNNT2P45379 298 aaPredicted RBP14.12□□□□□ -0.15
USP13-205ENST00000497380 ZRANB1Q9UGI0 708 aa14.12□□□□□ -0.15
USP13-205ENST00000497380 PHLPP1O60346 1717 aa14.12□□□□□ -0.15
USP13-205ENST00000497380 GCP02774 474 aa14.11□□□□□ -0.15
USP13-205ENST00000497380 PPP2R1AP30153 589 aa14.11□□□□□ -0.15
USP13-205ENST00000497380 HAP1P54257 671 aaPredicted RBP14.11□□□□□ -0.15
USP13-205ENST00000497380 MIER1Q8N108 512 aa14.11□□□□□ -0.15
USP13-205ENST00000497380 USP19O94966 1318 aa14.11□□□□□ -0.15
USP13-205ENST00000497380 USP54Q70EL1 1684 aa14.1□□□□□ -0.15
USP13-205ENST00000497380 CFAP53Q96M91 514 aa14.1□□□□□ -0.15
USP13-205ENST00000497380 KIF24Q5T7B8 1368 aa14.09□□□□□ -0.15
USP13-205ENST00000497380 COL16A1Q07092 1604 aaPredicted RBP14.08□□□□□ -0.16
USP13-205ENST00000497380 JCADQ9P266 1359 aa14.08□□□□□ -0.16
USP13-205ENST00000497380 SLIT3O75094 1523 aa14.07□□□□□ -0.16
USP13-205ENST00000497380 SOX12O15370 315 aa14.07□□□□□ -0.16
USP13-205ENST00000497380 AMPHP49418 695 aa14.07□□□□□ -0.16
USP13-205ENST00000497380 MTHFSP49914 203 aa14.07□□□□□ -0.16
USP13-205ENST00000497380 POLKQ9UBT6 870 aa14.07□□□□□ -0.16
USP13-205ENST00000497380 PNPLA6Q8IY17 1366 aa14.07□□□□□ -0.16
USP13-205ENST00000497380 PPM1GO15355 546 aaPredicted RBP14.05□□□□□ -0.16
USP13-205ENST00000497380 PLEKHG5O94827 1062 aa14.05□□□□□ -0.16
USP13-205ENST00000497380 RRS1Q15050 365 aaKnown RBP14.05□□□□□ -0.16
USP13-205ENST00000497380 ARHGEF25Q86VW2 580 aa14.05□□□□□ -0.16
USP13-205ENST00000497380 MRS2Q9HD23 443 aa14.05□□□□□ -0.16
USP13-205ENST00000497380 CABLES1Q8TDN4 633 aa14.04□□□□□ -0.16
USP13-205ENST00000497380 NUDCQ9Y266 331 aa14.04□□□□□ -0.16
USP13-205ENST00000497380 MAP3K19Q56UN5 1328 aa14.04□□□□□ -0.16
USP13-205ENST00000497380 SPATA31A6Q5VVP1 1343 aa14.04□□□□□ -0.16
USP13-205ENST00000497380 RTL1A6NKG5 1358 aa14.04□□□□□ -0.16
USP13-205ENST00000497380 COL22A1Q8NFW1 1626 aaPredicted RBP14.04□□□□□ -0.16
USP13-205ENST00000497380 ZC3H6P61129 1189 aaKnown RBP14.03□□□□□ -0.16
USP13-205ENST00000497380 IP6K1Q92551 441 aa14.03□□□□□ -0.16
USP13-205ENST00000497380 EMILIN1Q9Y6C2 1016 aa14.03□□□□□ -0.16
USP13-205ENST00000497380 CPDO75976 1380 aa14.03□□□□□ -0.16
USP13-205ENST00000497380 FLT4P35916 1363 aa14.03□□□□□ -0.16
USP13-205ENST00000497380 SMG6Q86US8 1419 aaKnown RBP14.03□□□□□ -0.16
USP13-205ENST00000497380 MAP2P11137 1827 aaKnown RBP14.03□□□□□ -0.16
USP13-205ENST00000497380 SRCAPQ6ZRS2 3230 aa14.03□□□□□ -0.16
USP13-205ENST00000497380 MARF1Q9Y4F3 1742 aaKnown RBP14.02□□□□□ -0.16
USP13-205ENST00000497380 PHRF1Q9P1Y6 1649 aaKnown RBP14.02□□□□□ -0.16
USP13-205ENST00000497380 INSRP06213 1382 aa14.02□□□□□ -0.17
USP13-205ENST00000497380 ZBTB7CA1YPR0 619 aa14.02□□□□□ -0.17
USP13-205ENST00000497380 FBLN1P23142 703 aa14.02□□□□□ -0.17
USP13-205ENST00000497380 PRDM11Q9NQV5 511 aa14.02□□□□□ -0.17
USP13-205ENST00000497380 SHPRHQ149N8 1683 aa14.01□□□□□ -0.17
USP13-205ENST00000497380 NFAT5O94916 1531 aa14.01□□□□□ -0.17
USP13-205ENST00000497380 CDK12Q9NYV4 1490 aaPredicted RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms