RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 ATAD2Q6PL18 1390 aa21.74■■□□□ 1.07
NEK4-206ENST00000496822 FAM83GA6ND36 823 aa21.73■■□□□ 1.07
NEK4-206ENST00000496822 POLR3AO14802 1390 aaPredicted RBP21.73■■□□□ 1.07
NEK4-206ENST00000496822 CCDC61Q9Y6R9 512 aa21.71■■□□□ 1.07
NEK4-206ENST00000496822 ACEP12821 1306 aa21.71■■□□□ 1.07
NEK4-206ENST00000496822 NRAPQ86VF7 1730 aa21.7■■□□□ 1.06
NEK4-206ENST00000496822 PLEKHG3A1L390 1219 aa21.69■■□□□ 1.06
NEK4-206ENST00000496822 SRPK2P78362 688 aaKnown RBP21.69■■□□□ 1.06
NEK4-206ENST00000496822 VPS72Q15906 364 aa21.69■■□□□ 1.06
NEK4-206ENST00000496822 CABP2Q9NPB3 220 aa21.69■■□□□ 1.06
NEK4-206ENST00000496822 ROCK2O75116 1388 aaKnown RBP21.69■■□□□ 1.06
NEK4-206ENST00000496822 NBPF8Q3BBV2 869 aa21.68■■□□□ 1.06
NEK4-206ENST00000496822 PPIP5K1Q6PFW1 1433 aa21.68■■□□□ 1.06
NEK4-206ENST00000496822 PHRF1Q9P1Y6 1649 aaKnown RBP21.68■■□□□ 1.06
NEK4-206ENST00000496822 COL14A1Q05707 1796 aaKnown RBP21.68■■□□□ 1.06
NEK4-206ENST00000496822 NUTM2GQ5VZR2 741 aa21.66■■□□□ 1.06
NEK4-206ENST00000496822 EP400Q96L91 3159 aa21.65■■□□□ 1.06
NEK4-206ENST00000496822 BTG4Q9NY30 223 aa21.65■■□□□ 1.06
NEK4-206ENST00000496822 CCDC9Q9Y3X0 531 aaKnown RBP21.65■■□□□ 1.06
NEK4-206ENST00000496822 KIAA0232Q92628 1395 aa21.62■■□□□ 1.05
NEK4-206ENST00000496822 BRWD3Q6RI45 1802 aa21.62■■□□□ 1.05
NEK4-206ENST00000496822 NRKQ7Z2Y5 1582 aa21.62■■□□□ 1.05
NEK4-206ENST00000496822 SEPT12Q8IYM1 358 aa21.62■■□□□ 1.05
NEK4-206ENST00000496822 PRDM11Q9NQV5 511 aa21.62■■□□□ 1.05
NEK4-206ENST00000496822 TRIM26Q12899 539 aaPredicted RBP21.6■■□□□ 1.05
NEK4-206ENST00000496822 CHRNA2Q15822 529 aa21.6■■□□□ 1.05
NEK4-206ENST00000496822 ONECUT3O60422 494 aaPredicted RBP21.59■■□□□ 1.05
NEK4-206ENST00000496822 CABP1Q9NZU7 370 aa21.59■■□□□ 1.05
NEK4-206ENST00000496822 USP19O94966 1318 aa21.58■■□□□ 1.05
NEK4-206ENST00000496822 EVC2Q86UK5 1308 aa21.58■■□□□ 1.05
NEK4-206ENST00000496822 USP6P35125 1406 aa21.58■■□□□ 1.05
NEK4-206ENST00000496822 ZC3H6P61129 1189 aaKnown RBP21.58■■□□□ 1.05
NEK4-206ENST00000496822 ABTB2Q8N961 1025 aa21.58■■□□□ 1.05
NEK4-206ENST00000496822 TONSLQ96HA7 1378 aa21.58■■□□□ 1.04
NEK4-206ENST00000496822 FAM98CQ17RN3 349 aaKnown RBP21.57■■□□□ 1.04
NEK4-206ENST00000496822 SPATA31A5Q5VU36 1347 aa21.55■■□□□ 1.04
NEK4-206ENST00000496822 SPATA31A7Q8IWB4 1347 aa21.55■■□□□ 1.04
NEK4-206ENST00000496822 A0A0G2JS52 829 aa21.54■■□□□ 1.04
NEK4-206ENST00000496822 MYT1Q01538 1121 aa21.54■■□□□ 1.04
NEK4-206ENST00000496822 SSH2Q76I76 1423 aa21.54■■□□□ 1.04
NEK4-206ENST00000496822 BRD4O60885 1362 aaPredicted RBP21.53■■□□□ 1.04
NEK4-206ENST00000496822 KRT27Q7Z3Y8 459 aa21.53■■□□□ 1.04
NEK4-206ENST00000496822 CARD11Q9BXL7 1154 aa21.53■■□□□ 1.04
NEK4-206ENST00000496822 LMO7Q8WWI1 1683 aa21.53■■□□□ 1.04
NEK4-206ENST00000496822 THSD7AQ9UPZ6 1657 aa21.53■■□□□ 1.04
NEK4-206ENST00000496822 STRN4Q9NRL3 753 aa21.52■■□□□ 1.04
NEK4-206ENST00000496822 PIK3C2AO00443 1686 aa21.52■■□□□ 1.04
NEK4-206ENST00000496822 BLMP54132 1417 aaPredicted RBP21.52■■□□□ 1.04
NEK4-206ENST00000496822 CPDO75976 1380 aa21.51■■□□□ 1.03
NEK4-206ENST00000496822 SBNO2Q9Y2G9 1366 aa21.51■■□□□ 1.03
NEK4-206ENST00000496822 CAMTA1Q9Y6Y1 1673 aa21.51■■□□□ 1.03
NEK4-206ENST00000496822 NLRP13Q86W25 1043 aa21.51■■□□□ 1.03
NEK4-206ENST00000496822 CCDC125Q86Z20 511 aa21.5■■□□□ 1.03
NEK4-206ENST00000496822 SPATA31A1Q5TZJ5 1347 aa21.5■■□□□ 1.03
NEK4-206ENST00000496822 SLIT3O75094 1523 aa21.5■■□□□ 1.03
NEK4-206ENST00000496822 GCP02774 474 aa21.49■■□□□ 1.03
NEK4-206ENST00000496822 AKAP12Q02952 1782 aa21.48■■□□□ 1.03
NEK4-206ENST00000496822 NLRP6P59044 892 aa21.47■■□□□ 1.03
NEK4-206ENST00000496822 CPSF1Q10570 1443 aaKnown RBP21.46■■□□□ 1.03
NEK4-206ENST00000496822 FAM182BQ5T319 152 aa21.45■■□□□ 1.02
NEK4-206ENST00000496822 DEFB132Q7Z7B7 95 aa21.45■■□□□ 1.02
NEK4-206ENST00000496822 TTC21BQ7Z4L5 1316 aa21.45■■□□□ 1.02
NEK4-206ENST00000496822 LARP1Q6PKG0 1096 aaKnown RBP21.44■■□□□ 1.02
NEK4-206ENST00000496822 USP35Q9P2H5 1018 aa21.44■■□□□ 1.02
NEK4-206ENST00000496822 COL5A2P05997 1499 aaPredicted RBP21.44■■□□□ 1.02
NEK4-206ENST00000496822 ZBTB7CA1YPR0 619 aa21.42■■□□□ 1.02
NEK4-206ENST00000496822 EVA1CP58658 441 aa21.42■■□□□ 1.02
NEK4-206ENST00000496822 MON2Q7Z3U7 1717 aa21.42■■□□□ 1.02
NEK4-206ENST00000496822 KTN1Q86UP2 1357 aaKnown RBP21.42■■□□□ 1.02
NEK4-206ENST00000496822 ZNF692Q9BU19 519 aaPredicted RBP21.42■■□□□ 1.02
NEK4-206ENST00000496822 CD163L1Q9NR16 1453 aa21.42■■□□□ 1.02
NEK4-206ENST00000496822 AATKQ6ZMQ8 1374 aa21.39■■□□□ 1.02
NEK4-206ENST00000496822 TTC21AQ8NDW8 1320 aa21.39■■□□□ 1.01
NEK4-206ENST00000496822 SF3B2Q13435 895 aaKnown RBP21.39■■□□□ 1.01
NEK4-206ENST00000496822 COL18A1P39060 1754 aa21.38■■□□□ 1.01
NEK4-206ENST00000496822 BARGINQ6ZT62 677 aa21.38■■□□□ 1.01
NEK4-206ENST00000496822 ZRANB1Q9UGI0 708 aa21.38■■□□□ 1.01
NEK4-206ENST00000496822 SOX12O15370 315 aa21.37■■□□□ 1.01
NEK4-206ENST00000496822 NFAT5O94916 1531 aa21.37■■□□□ 1.01
NEK4-206ENST00000496822 TCP11L2Q8N4U5 519 aa21.36■■□□□ 1.01
NEK4-206ENST00000496822 TMC1Q8TDI8 760 aa21.36■■□□□ 1.01
NEK4-206ENST00000496822 TESK2Q96S53 571 aa21.36■■□□□ 1.01
NEK4-206ENST00000496822 SLC12A5Q9H2X9 1139 aa21.36■■□□□ 1.01
NEK4-206ENST00000496822 CRB1P82279 1406 aa21.36■■□□□ 1.01
NEK4-206ENST00000496822 RGPD1P0DJD0 1748 aa21.35■■□□□ 1.01
NEK4-206ENST00000496822 ST20-MTHFSA0A0A6YYL1 179 aa21.35■■□□□ 1.01
NEK4-206ENST00000496822 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.35■■□□□ 1.01
NEK4-206ENST00000496822 AXIN2Q9Y2T1 843 aa21.35■■□□□ 1.01
NEK4-206ENST00000496822 TNS1Q9HBL0 1735 aaKnown RBP21.35■■□□□ 1.01
NEK4-206ENST00000496822 ARHGEF25Q86VW2 580 aa21.34■■□□□ 1.01
NEK4-206ENST00000496822 NME9Q86XW9 330 aa21.33■■□□□ 1.01
NEK4-206ENST00000496822 USP54Q70EL1 1684 aa21.33■■□□□ 1
NEK4-206ENST00000496822 A0A1W2PP64 1363 aa21.33■■□□□ 1
NEK4-206ENST00000496822 KCNH5Q8NCM2 988 aa21.32■■□□□ 1
NEK4-206ENST00000496822 THRAP3Q9Y2W1 955 aaKnown RBP21.32■■□□□ 1
NEK4-206ENST00000496822 USP31Q70CQ4 1352 aa21.32■■□□□ 1
NEK4-206ENST00000496822 PARP4Q9UKK3 1724 aaKnown RBP21.32■■□□□ 1
NEK4-206ENST00000496822 BAG6P46379 1132 aa21.31■■□□□ 1
NEK4-206ENST00000496822 SRCAPQ6ZRS2 3230 aa21.31■■□□□ 1
NEK4-206ENST00000496822 EDC4Q6P2E9 1401 aaKnown RBP21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 8925.8 ms