RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 NRAPQ86VF7 1730 aa18.69■□□□□ 0.58
FN1-226ENST00000496542 COL14A1Q05707 1796 aaKnown RBP18.69■□□□□ 0.58
FN1-226ENST00000496542 L3MBTL2Q969R5 705 aa18.68■□□□□ 0.58
FN1-226ENST00000496542 CENPJQ9HC77 1338 aaPredicted RBP18.68■□□□□ 0.58
FN1-226ENST00000496542 QRICH2Q9H0J4 1663 aa18.67■□□□□ 0.58
FN1-226ENST00000496542 SEPT12Q8IYM1 358 aa18.67■□□□□ 0.58
FN1-226ENST00000496542 SIN3AQ96ST3 1273 aa18.67■□□□□ 0.58
FN1-226ENST00000496542 BTG4Q9NY30 223 aa18.66■□□□□ 0.58
FN1-226ENST00000496542 CCDC61Q9Y6R9 512 aa18.66■□□□□ 0.58
FN1-226ENST00000496542 ACEP12821 1306 aa18.66■□□□□ 0.58
FN1-226ENST00000496542 SRPK2P78362 688 aaKnown RBP18.65■□□□□ 0.58
FN1-226ENST00000496542 NEUROD1Q13562 356 aa18.65■□□□□ 0.58
FN1-226ENST00000496542 POLR3AO14802 1390 aaPredicted RBP18.65■□□□□ 0.58
FN1-226ENST00000496542 PHRF1Q9P1Y6 1649 aaKnown RBP18.64■□□□□ 0.57
FN1-226ENST00000496542 A0A0G2JS52 829 aa18.64■□□□□ 0.57
FN1-226ENST00000496542 MYT1Q01538 1121 aa18.64■□□□□ 0.57
FN1-226ENST00000496542 NUTM2GQ5VZR2 741 aa18.64■□□□□ 0.57
FN1-226ENST00000496542 PRDM11Q9NQV5 511 aa18.64■□□□□ 0.57
FN1-226ENST00000496542 TRPM1Q7Z4N2 1603 aa18.63■□□□□ 0.57
FN1-226ENST00000496542 NBPF8Q3BBV2 869 aa18.63■□□□□ 0.57
FN1-226ENST00000496542 PLEKHG3A1L390 1219 aa18.62■□□□□ 0.57
FN1-226ENST00000496542 CCDC125Q86Z20 511 aa18.62■□□□□ 0.57
FN1-226ENST00000496542 CABP2Q9NPB3 220 aa18.62■□□□□ 0.57
FN1-226ENST00000496542 PPIP5K1Q6PFW1 1433 aa18.62■□□□□ 0.57
FN1-226ENST00000496542 KIAA0232Q92628 1395 aa18.61■□□□□ 0.57
FN1-226ENST00000496542 ONECUT3O60422 494 aaPredicted RBP18.6■□□□□ 0.57
FN1-226ENST00000496542 FAM98CQ17RN3 349 aaKnown RBP18.6■□□□□ 0.57
FN1-226ENST00000496542 BLMP54132 1417 aaPredicted RBP18.59■□□□□ 0.57
FN1-226ENST00000496542 ROCK2O75116 1388 aaKnown RBP18.59■□□□□ 0.57
FN1-226ENST00000496542 CHRNA2Q15822 529 aa18.59■□□□□ 0.57
FN1-226ENST00000496542 KRT27Q7Z3Y8 459 aa18.59■□□□□ 0.57
FN1-226ENST00000496542 ZC3H6P61129 1189 aaKnown RBP18.58■□□□□ 0.56
FN1-226ENST00000496542 SPATA31A5Q5VU36 1347 aa18.57■□□□□ 0.56
FN1-226ENST00000496542 SPATA31A7Q8IWB4 1347 aa18.57■□□□□ 0.56
FN1-226ENST00000496542 NRKQ7Z2Y5 1582 aa18.57■□□□□ 0.56
FN1-226ENST00000496542 ABTB2Q8N961 1025 aa18.57■□□□□ 0.56
FN1-226ENST00000496542 SF3B2Q13435 895 aaKnown RBP18.55■□□□□ 0.56
FN1-226ENST00000496542 STRN4Q9NRL3 753 aa18.55■□□□□ 0.56
FN1-226ENST00000496542 SRCAPQ6ZRS2 3230 aa18.55■□□□□ 0.56
FN1-226ENST00000496542 EVC2Q86UK5 1308 aa18.54■□□□□ 0.56
FN1-226ENST00000496542 CABP1Q9NZU7 370 aa18.54■□□□□ 0.56
FN1-226ENST00000496542 ZRANB1Q9UGI0 708 aa18.54■□□□□ 0.56
FN1-226ENST00000496542 USP19O94966 1318 aa18.53■□□□□ 0.56
FN1-226ENST00000496542 DEFB132Q7Z7B7 95 aa18.53■□□□□ 0.56
FN1-226ENST00000496542 THSD7AQ9UPZ6 1657 aa18.53■□□□□ 0.56
FN1-226ENST00000496542 USP6P35125 1406 aa18.52■□□□□ 0.56
FN1-226ENST00000496542 SPATA31A1Q5TZJ5 1347 aa18.51■□□□□ 0.55
FN1-226ENST00000496542 NLRP13Q86W25 1043 aa18.51■□□□□ 0.55
FN1-226ENST00000496542 BRD4O60885 1362 aaPredicted RBP18.51■□□□□ 0.55
FN1-226ENST00000496542 CPDO75976 1380 aa18.5■□□□□ 0.55
FN1-226ENST00000496542 SSH2Q76I76 1423 aa18.49■□□□□ 0.55
FN1-226ENST00000496542 EVA1CP58658 441 aa18.49■□□□□ 0.55
FN1-226ENST00000496542 FAM182BQ5T319 152 aa18.49■□□□□ 0.55
FN1-226ENST00000496542 USP35Q9P2H5 1018 aa18.49■□□□□ 0.55
FN1-226ENST00000496542 LMO7Q8WWI1 1683 aa18.49■□□□□ 0.55
FN1-226ENST00000496542 CAMTA1Q9Y6Y1 1673 aa18.49■□□□□ 0.55
FN1-226ENST00000496542 GCP02774 474 aa18.48■□□□□ 0.55
FN1-226ENST00000496542 PIK3C2AO00443 1686 aa18.47■□□□□ 0.55
FN1-226ENST00000496542 TONSLQ96HA7 1378 aa18.47■□□□□ 0.55
FN1-226ENST00000496542 ZBTB7CA1YPR0 619 aa18.47■□□□□ 0.55
FN1-226ENST00000496542 NLRP6P59044 892 aa18.47■□□□□ 0.55
FN1-226ENST00000496542 AKAP12Q02952 1782 aa18.47■□□□□ 0.55
FN1-226ENST00000496542 RGPD1P0DJD0 1748 aa18.46■□□□□ 0.55
FN1-226ENST00000496542 LARP1Q6PKG0 1096 aaKnown RBP18.46■□□□□ 0.55
FN1-226ENST00000496542 SLIT3O75094 1523 aa18.45■□□□□ 0.54
FN1-226ENST00000496542 BAG6P46379 1132 aa18.45■□□□□ 0.54
FN1-226ENST00000496542 CARD11Q9BXL7 1154 aa18.45■□□□□ 0.54
FN1-226ENST00000496542 COL5A2P05997 1499 aaPredicted RBP18.43■□□□□ 0.54
FN1-226ENST00000496542 BARGINQ6ZT62 677 aa18.42■□□□□ 0.54
FN1-226ENST00000496542 TCP11L2Q8N4U5 519 aa18.42■□□□□ 0.54
FN1-226ENST00000496542 TNS1Q9HBL0 1735 aaKnown RBP18.42■□□□□ 0.54
FN1-226ENST00000496542 TTC21BQ7Z4L5 1316 aa18.42■□□□□ 0.54
FN1-226ENST00000496542 SBNO2Q9Y2G9 1366 aa18.42■□□□□ 0.54
FN1-226ENST00000496542 ZNF692Q9BU19 519 aaPredicted RBP18.41■□□□□ 0.54
FN1-226ENST00000496542 AATKQ6ZMQ8 1374 aa18.4■□□□□ 0.54
FN1-226ENST00000496542 KTN1Q86UP2 1357 aaKnown RBP18.4■□□□□ 0.54
FN1-226ENST00000496542 SOX12O15370 315 aa18.39■□□□□ 0.53
FN1-226ENST00000496542 EN1Q05925 392 aaPredicted RBP18.39■□□□□ 0.53
FN1-226ENST00000496542 PDE3BQ13370 1112 aa18.39■□□□□ 0.53
FN1-226ENST00000496542 FAM196AQ6ZSG2 479 aa18.39■□□□□ 0.53
FN1-226ENST00000496542 MON2Q7Z3U7 1717 aa18.39■□□□□ 0.53
FN1-226ENST00000496542 CPSF1Q10570 1443 aaKnown RBP18.39■□□□□ 0.53
FN1-226ENST00000496542 COL18A1P39060 1754 aa18.38■□□□□ 0.53
FN1-226ENST00000496542 TRIM26Q12899 539 aaPredicted RBP18.38■□□□□ 0.53
FN1-226ENST00000496542 TTC21AQ8NDW8 1320 aa18.38■□□□□ 0.53
FN1-226ENST00000496542 CRB1P82279 1406 aa18.38■□□□□ 0.53
FN1-226ENST00000496542 TRIM37O94972 964 aa18.37■□□□□ 0.53
FN1-226ENST00000496542 THRAP3Q9Y2W1 955 aaKnown RBP18.37■□□□□ 0.53
FN1-226ENST00000496542 PARP4Q9UKK3 1724 aaKnown RBP18.37■□□□□ 0.53
FN1-226ENST00000496542 DISP2A7MBM2 1401 aa18.36■□□□□ 0.53
FN1-226ENST00000496542 RGPD5Q99666 1765 aa18.35■□□□□ 0.53
FN1-226ENST00000496542 PSDA5PKW4 1024 aaPredicted RBP18.35■□□□□ 0.53
FN1-226ENST00000496542 KCNH5Q8NCM2 988 aa18.35■□□□□ 0.53
FN1-226ENST00000496542 TMC1Q8TDI8 760 aa18.35■□□□□ 0.53
FN1-226ENST00000496542 TOM1L2Q6ZVM7 507 aa18.34■□□□□ 0.53
FN1-226ENST00000496542 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.34■□□□□ 0.53
FN1-226ENST00000496542 NFAT5O94916 1531 aa18.33■□□□□ 0.53
FN1-226ENST00000496542 ARHGEF25Q86VW2 580 aa18.33■□□□□ 0.52
FN1-226ENST00000496542 AXIN2Q9Y2T1 843 aa18.33■□□□□ 0.52
FN1-226ENST00000496542 CD163L1Q9NR16 1453 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms