RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 NUDT12Q9BQG2 462 aa9.98□□□□□ -0.81
SSR3-208ENST00000496050 KCNH2Q12809 1159 aa9.97□□□□□ -0.81
SSR3-208ENST00000496050 PPP1R12CQ9BZL4 782 aa9.97□□□□□ -0.81
SSR3-208ENST00000496050 MAP10Q9P2G4 905 aa9.97□□□□□ -0.81
SSR3-208ENST00000496050 PTPN5P54829 565 aa9.96□□□□□ -0.82
SSR3-208ENST00000496050 PDE4CQ08493 712 aa9.96□□□□□ -0.82
SSR3-208ENST00000496050 ADH1BP00325 375 aa9.95□□□□□ -0.82
SSR3-208ENST00000496050 GPKOWQ92917 476 aaPredicted RBP eCLIP9.95□□□□□ -0.823e-8■□□□□ 10.9
SSR3-208ENST00000496050 MTRQ99707 1265 aa9.95□□□□□ -0.82
SSR3-208ENST00000496050 FBXO45P0C2W1 286 aa9.94□□□□□ -0.82
SSR3-208ENST00000496050 RFX1P22670 979 aa9.94□□□□□ -0.82
SSR3-208ENST00000496050 PTK2Q05397 1052 aa9.94□□□□□ -0.82
SSR3-208ENST00000496050 ZNF592Q92610 1267 aa9.94□□□□□ -0.82
SSR3-208ENST00000496050 IL21Q9HBE4 155 aa9.94□□□□□ -0.82
SSR3-208ENST00000496050 TFIP11Q9UBB9 837 aaKnown RBP9.94□□□□□ -0.82
SSR3-208ENST00000496050 GPSM3Q9Y4H4 160 aa9.94□□□□□ -0.82
SSR3-208ENST00000496050 PALM3A6NDB9 673 aaPredicted RBP9.93□□□□□ -0.82
SSR3-208ENST00000496050 PDXDC2PQ6P474 469 aa9.93□□□□□ -0.82
SSR3-208ENST00000496050 CDAN1Q8IWY9 1227 aa9.93□□□□□ -0.82
SSR3-208ENST00000496050 PBXIP1Q96AQ6 731 aa9.93□□□□□ -0.82
SSR3-208ENST00000496050 POTEMA6NI47 508 aa9.92□□□□□ -0.82
SSR3-208ENST00000496050 MCCD1P59942 119 aaPredicted RBP9.92□□□□□ -0.82
SSR3-208ENST00000496050 CCDC24Q8N4L8 307 aa9.92□□□□□ -0.82
SSR3-208ENST00000496050 SLC6A16Q9GZN6 736 aa9.92□□□□□ -0.82
SSR3-208ENST00000496050 LMOD1P29536 600 aaPredicted RBP9.91□□□□□ -0.82
SSR3-208ENST00000496050 TJAP1Q5JTD0 557 aa9.91□□□□□ -0.82
SSR3-208ENST00000496050 CFAP70Q5T0N1 1121 aa9.91□□□□□ -0.82
SSR3-208ENST00000496050 NBPF14Q5TI25 921 aa9.91□□□□□ -0.82
SSR3-208ENST00000496050 TRAIPQ9BWF2 469 aa9.91□□□□□ -0.82
SSR3-208ENST00000496050 MYT1LQ9UL68 1186 aa9.91□□□□□ -0.82
SSR3-208ENST00000496050 TRIM26Q12899 539 aaPredicted RBP9.9□□□□□ -0.82
SSR3-208ENST00000496050 ZNF516Q92618 1163 aa9.9□□□□□ -0.82
SSR3-208ENST00000496050 PRDM9Q9NQV7 894 aa9.9□□□□□ -0.82
SSR3-208ENST00000496050 TLL1O43897 1013 aa9.89□□□□□ -0.83
SSR3-208ENST00000496050 ZBTB7CA1YPR0 619 aa9.88□□□□□ -0.83
SSR3-208ENST00000496050 POTEGQ6S5H5 508 aa9.88□□□□□ -0.83
SSR3-208ENST00000496050 UCN2Q96RP3 112 aa9.88□□□□□ -0.83
SSR3-208ENST00000496050 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.87□□□□□ -0.83
SSR3-208ENST00000496050 RETREG2Q8NC44 543 aa9.87□□□□□ -0.83
SSR3-208ENST00000496050 ATP9BO43861 1147 aa9.86□□□□□ -0.83
SSR3-208ENST00000496050 SRPK2P78362 688 aaKnown RBP9.86□□□□□ -0.83
SSR3-208ENST00000496050 TBC1D9Q6ZT07 1266 aa9.86□□□□□ -0.83
SSR3-208ENST00000496050 NFATC2IPQ8NCF5 419 aa9.86□□□□□ -0.83
SSR3-208ENST00000496050 UNC93B1Q9H1C4 597 aa9.86□□□□□ -0.83
SSR3-208ENST00000496050 PODXL2Q9NZ53 605 aa9.86□□□□□ -0.83
SSR3-208ENST00000496050 CSB-PGBD3P0DP91 1061 aa9.85□□□□□ -0.83
SSR3-208ENST00000496050 PTCRAQ6ISU1 281 aaPredicted RBP9.85□□□□□ -0.83
SSR3-208ENST00000496050 ZBTB33Q86T24 672 aa9.85□□□□□ -0.83
SSR3-208ENST00000496050 KCTD17Q8N5Z5 321 aa9.85□□□□□ -0.83
SSR3-208ENST00000496050 ARHGAP9Q9BRR9 750 aa9.85□□□□□ -0.83
SSR3-208ENST00000496050 CEP126Q9P2H0 1117 aa9.85□□□□□ -0.83
SSR3-208ENST00000496050 MAFBQ9Y5Q3 323 aaPredicted RBP9.85□□□□□ -0.83
SSR3-208ENST00000496050 VRTNQ9H8Y1 702 aa9.84□□□□□ -0.83
SSR3-208ENST00000496050 PCDHB9Q9Y5E1 797 aa9.84□□□□□ -0.83
SSR3-208ENST00000496050 SLFNL1Q499Z3 407 aa9.83□□□□□ -0.84
SSR3-208ENST00000496050 SKIP12755 728 aa9.82□□□□□ -0.84
SSR3-208ENST00000496050 NKX2-3Q8TAU0 364 aa9.82□□□□□ -0.84
SSR3-208ENST00000496050 ADAM32Q8TC27 787 aa9.82□□□□□ -0.84
SSR3-208ENST00000496050 ATG7O95352 703 aa9.81□□□□□ -0.84
SSR3-208ENST00000496050 S1PR4O95977 384 aa9.81□□□□□ -0.84
SSR3-208ENST00000496050 CDCA8Q53HL2 280 aa9.81□□□□□ -0.84
SSR3-208ENST00000496050 BAP1Q92560 729 aa9.81□□□□□ -0.84
SSR3-208ENST00000496050 HCSTQ9UBK5 93 aa9.81□□□□□ -0.84
SSR3-208ENST00000496050 LZTS3O60299 673 aaPredicted RBP9.8□□□□□ -0.84
SSR3-208ENST00000496050 AGERQ15109 404 aa9.8□□□□□ -0.84
SSR3-208ENST00000496050 SH3BP5LQ7L8J4 393 aa9.8□□□□□ -0.84
SSR3-208ENST00000496050 BPHLQ86WA6 291 aaPredicted RBP9.8□□□□□ -0.84
SSR3-208ENST00000496050 DZIP3Q86Y13 1208 aaKnown RBP9.8□□□□□ -0.84
SSR3-208ENST00000496050 OCSTAMPQ9BR26 566 aa9.8□□□□□ -0.84
SSR3-208ENST00000496050 FCF1Q9Y324 198 aaKnown RBP9.8□□□□□ -0.84
SSR3-208ENST00000496050 PIK3CDO00329 1044 aa9.79□□□□□ -0.84
SSR3-208ENST00000496050 KCNC4Q03721 635 aa9.79□□□□□ -0.84
SSR3-208ENST00000496050 RNF135Q8IUD6 432 aa9.79□□□□□ -0.84
SSR3-208ENST00000496050 AEBP1Q8IUX7 1158 aa9.79□□□□□ -0.84
SSR3-208ENST00000496050 USTQ9Y2C2 406 aa9.79□□□□□ -0.84
SSR3-208ENST00000496050 MAGEB6P1A0A0J9YX57 407 aa9.77□□□□□ -0.85
SSR3-208ENST00000496050 ZBTB24O43167 697 aaPredicted RBP9.77□□□□□ -0.85
SSR3-208ENST00000496050 KANK4Q5T7N3 995 aaPredicted RBP9.77□□□□□ -0.85
SSR3-208ENST00000496050 PLEKHM2Q8IWE5 1019 aa9.77□□□□□ -0.85
SSR3-208ENST00000496050 PHTF2Q8N3S3 785 aa9.77□□□□□ -0.85
SSR3-208ENST00000496050 USP17L3A6NCW0 530 aa9.76□□□□□ -0.85
SSR3-208ENST00000496050 USP17L4A6NCW7 530 aa9.76□□□□□ -0.85
SSR3-208ENST00000496050 USP17L5A8MUK1 530 aa9.76□□□□□ -0.85
SSR3-208ENST00000496050 GGCXP38435 758 aa9.76□□□□□ -0.85
SSR3-208ENST00000496050 MAP7D1Q3KQU3 841 aa9.76□□□□□ -0.85
SSR3-208ENST00000496050 USP17L2Q6R6M4 530 aa9.76□□□□□ -0.85
SSR3-208ENST00000496050 USP17L1Q7RTZ2 530 aa9.76□□□□□ -0.85
SSR3-208ENST00000496050 SH3RF1Q7Z6J0 888 aa9.76□□□□□ -0.85
SSR3-208ENST00000496050 ZNF511Q8NB15 262 aa9.76□□□□□ -0.85
SSR3-208ENST00000496050 CARD14Q9BXL6 1004 aa9.76□□□□□ -0.85
SSR3-208ENST00000496050 FAM174AQ8TBP5 190 aa9.75□□□□□ -0.85
SSR3-208ENST00000496050 PATL2C9JE40 543 aaKnown RBP9.74□□□□□ -0.85
SSR3-208ENST00000496050 LINC01559Q495D7 138 aa9.74□□□□□ -0.85
SSR3-208ENST00000496050 RNF20Q5VTR2 975 aa9.74□□□□□ -0.85
SSR3-208ENST00000496050 MKRN1Q9UHC7 482 aaKnown RBP9.74□□□□□ -0.85
SSR3-208ENST00000496050 ELOAQ14241 798 aaKnown RBP9.73□□□□□ -0.85
SSR3-208ENST00000496050 DEPDC4Q8N2C3 294 aa9.73□□□□□ -0.85
SSR3-208ENST00000496050 PLPP7Q8NBV4 271 aa9.73□□□□□ -0.85
SSR3-208ENST00000496050 FOXJ1Q92949 421 aa9.73□□□□□ -0.85
SSR3-208ENST00000496050 PCDH10Q9P2E7 1040 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms