RNA–Protein interactions for RNA: ENST00000495929.3

ZNF48-202, Transcript of zinc finger protein 48, humanhuman

TSL 4

Gene ZNF48, Length 430 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48-202ENST00000495929 ATAD2Q6PL18 1390 aa33.63■■■□□ 2.97
ZNF48-202ENST00000495929 ITSN1Q15811 1721 aa33.63■■■□□ 2.97
ZNF48-202ENST00000495929 RBM6P78332 1123 aaKnown RBP33.62■■■□□ 2.97
ZNF48-202ENST00000495929 ZNF692Q9BU19 519 aaPredicted RBP33.62■■■□□ 2.97
ZNF48-202ENST00000495929 ABTB2Q8N961 1025 aa33.6■■■□□ 2.97
ZNF48-202ENST00000495929 BRD4O60885 1362 aaPredicted RBP33.6■■■□□ 2.97
ZNF48-202ENST00000495929 ST20-MTHFSA0A0A6YYL1 179 aa33.59■■■□□ 2.97
ZNF48-202ENST00000495929 UNC5CLQ8IV45 518 aa33.55■■■□□ 2.96
ZNF48-202ENST00000495929 PUS7Q96PZ0 661 aaKnown RBP33.55■■■□□ 2.96
ZNF48-202ENST00000495929 NUTM2GQ5VZR2 741 aa33.54■■■□□ 2.96
ZNF48-202ENST00000495929 NLRP13Q86W25 1043 aa33.54■■■□□ 2.96
ZNF48-202ENST00000495929 TMC1Q8TDI8 760 aa33.54■■■□□ 2.96
ZNF48-202ENST00000495929 USP47Q96K76 1375 aa33.49■■■□□ 2.95
ZNF48-202ENST00000495929 TOPAZ1Q8N9V7 1692 aa33.49■■■□□ 2.95
ZNF48-202ENST00000495929 FAM83GA6ND36 823 aa33.49■■■□□ 2.95
ZNF48-202ENST00000495929 TRPM3Q9HCF6 1732 aaPredicted RBP33.48■■■□□ 2.95
ZNF48-202ENST00000495929 TMF1P82094 1093 aa33.48■■■□□ 2.95
ZNF48-202ENST00000495929 HDGFL2Q7Z4V5 671 aaPredicted RBP33.48■■■□□ 2.95
ZNF48-202ENST00000495929 TESK2Q96S53 571 aa33.47■■■□□ 2.95
ZNF48-202ENST00000495929 PRDM11Q9NQV5 511 aa33.47■■■□□ 2.95
ZNF48-202ENST00000495929 USP6P35125 1406 aa33.46■■■□□ 2.95
ZNF48-202ENST00000495929 BCL9LQ86UU0 1499 aa33.45■■■□□ 2.95
ZNF48-202ENST00000495929 NLRP6P59044 892 aa33.45■■■□□ 2.95
ZNF48-202ENST00000495929 CDCA8Q53HL2 280 aa33.45■■■□□ 2.95
ZNF48-202ENST00000495929 GJD4Q96KN9 370 aaPredicted RBP33.45■■■□□ 2.95
ZNF48-202ENST00000495929 TERF2IPQ9NYB0 399 aa33.45■■■□□ 2.95
ZNF48-202ENST00000495929 CCDC9Q9Y3X0 531 aaKnown RBP33.45■■■□□ 2.95
ZNF48-202ENST00000495929 ATRNO75882 1429 aa33.44■■■□□ 2.94
ZNF48-202ENST00000495929 CDK12Q9NYV4 1490 aaPredicted RBP33.44■■■□□ 2.94
ZNF48-202ENST00000495929 BTG4Q9NY30 223 aa33.42■■■□□ 2.94
ZNF48-202ENST00000495929 KTN1Q86UP2 1357 aaKnown RBP33.42■■■□□ 2.94
ZNF48-202ENST00000495929 SLIT2O94813 1529 aa33.42■■■□□ 2.94
ZNF48-202ENST00000495929 ALS2Q96Q42 1657 aa33.42■■■□□ 2.94
ZNF48-202ENST00000495929 ZC3H6P61129 1189 aaKnown RBP33.41■■■□□ 2.94
ZNF48-202ENST00000495929 TTC21BQ7Z4L5 1316 aa33.4■■■□□ 2.94
ZNF48-202ENST00000495929 TTC21AQ8NDW8 1320 aa33.4■■■□□ 2.94
ZNF48-202ENST00000495929 VPS72Q15906 364 aa33.4■■■□□ 2.94
ZNF48-202ENST00000495929 SLC12A5Q9H2X9 1139 aa33.4■■■□□ 2.94
ZNF48-202ENST00000495929 GCP02774 474 aa33.38■■■□□ 2.93
ZNF48-202ENST00000495929 NINLQ9Y2I6 1382 aa33.36■■■□□ 2.93
ZNF48-202ENST00000495929 KIAA0232Q92628 1395 aa33.35■■■□□ 2.93
ZNF48-202ENST00000495929 USP19O94966 1318 aa33.35■■■□□ 2.93
ZNF48-202ENST00000495929 CPSF1Q10570 1443 aaKnown RBP33.35■■■□□ 2.93
ZNF48-202ENST00000495929 MARF1Q9Y4F3 1742 aaKnown RBP33.34■■■□□ 2.93
ZNF48-202ENST00000495929 EVA1CP58658 441 aa33.33■■■□□ 2.93
ZNF48-202ENST00000495929 KCNH5Q8NCM2 988 aa33.33■■■□□ 2.93
ZNF48-202ENST00000495929 CHRNA2Q15822 529 aa33.32■■■□□ 2.92
ZNF48-202ENST00000495929 SSH2Q76I76 1423 aa33.32■■■□□ 2.92
ZNF48-202ENST00000495929 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.32■■■□□ 2.92
ZNF48-202ENST00000495929 EIF4G2P78344 907 aaKnown RBP eCLIP33.31■■■□□ 2.92
ZNF48-202ENST00000495929 RGS12O14924 1447 aa33.28■■■□□ 2.92
ZNF48-202ENST00000495929 ZBTB7CA1YPR0 619 aa33.28■■■□□ 2.92
ZNF48-202ENST00000495929 CPDO75976 1380 aa33.27■■■□□ 2.92
ZNF48-202ENST00000495929 STRN4Q9NRL3 753 aa33.27■■■□□ 2.92
ZNF48-202ENST00000495929 ABCA3Q99758 1704 aa33.25■■■□□ 2.91
ZNF48-202ENST00000495929 COL14A1Q05707 1796 aaKnown RBP33.24■■■□□ 2.91
ZNF48-202ENST00000495929 A0A0G2JS52 829 aa33.24■■■□□ 2.91
ZNF48-202ENST00000495929 MYT1Q01538 1121 aa33.24■■■□□ 2.91
ZNF48-202ENST00000495929 EDC4Q6P2E9 1401 aaKnown RBP33.22■■■□□ 2.91
ZNF48-202ENST00000495929 SOX12O15370 315 aa33.21■■■□□ 2.91
ZNF48-202ENST00000495929 A0A1W2PP64 1363 aa33.21■■■□□ 2.91
ZNF48-202ENST00000495929 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.2■■■□□ 2.91
ZNF48-202ENST00000495929 NWD2Q9ULI1 1742 aa33.2■■■□□ 2.91
ZNF48-202ENST00000495929 SEPT12Q8IYM1 358 aa33.2■■■□□ 2.91
ZNF48-202ENST00000495929 NME9Q86XW9 330 aa33.19■■■□□ 2.9
ZNF48-202ENST00000495929 ONECUT3O60422 494 aaPredicted RBP33.18■■■□□ 2.9
ZNF48-202ENST00000495929 SPATA31A5Q5VU36 1347 aa33.18■■■□□ 2.9
ZNF48-202ENST00000495929 SPATA31A7Q8IWB4 1347 aa33.18■■■□□ 2.9
ZNF48-202ENST00000495929 CD163L1Q9NR16 1453 aa33.18■■■□□ 2.9
ZNF48-202ENST00000495929 HSPA5P11021 654 aaKnown RBP33.17■■■□□ 2.9
ZNF48-202ENST00000495929 UPF1Q92900 1129 aaKnown RBP eCLIP33.17■■■□□ 2.9
ZNF48-202ENST00000495929 PLCH1Q4KWH8 1693 aa33.17■■■□□ 2.9
ZNF48-202ENST00000495929 FAM98CQ17RN3 349 aaKnown RBP33.16■■■□□ 2.9
ZNF48-202ENST00000495929 USP31Q70CQ4 1352 aa33.16■■■□□ 2.9
ZNF48-202ENST00000495929 ANKRD36BQ8N2N9 1353 aa33.16■■■□□ 2.9
ZNF48-202ENST00000495929 PHRF1Q9P1Y6 1649 aaKnown RBP33.16■■■□□ 2.9
ZNF48-202ENST00000495929 POLR3GLQ9BT43 218 aa33.15■■■□□ 2.9
ZNF48-202ENST00000495929 AATKQ6ZMQ8 1374 aa33.14■■■□□ 2.9
ZNF48-202ENST00000495929 CRYBG1Q9Y4K1 1723 aa33.14■■■□□ 2.89
ZNF48-202ENST00000495929 NRKQ7Z2Y5 1582 aa33.13■■■□□ 2.89
ZNF48-202ENST00000495929 ARHGEF25Q86VW2 580 aa33.13■■■□□ 2.89
ZNF48-202ENST00000495929 ZRANB1Q9UGI0 708 aa33.13■■■□□ 2.89
ZNF48-202ENST00000495929 AKAP12Q02952 1782 aa33.13■■■□□ 2.89
ZNF48-202ENST00000495929 COG3Q96JB2 828 aa33.12■■■□□ 2.89
ZNF48-202ENST00000495929 SLIT3O75094 1523 aa33.12■■■□□ 2.89
ZNF48-202ENST00000495929 SPATA31A1Q5TZJ5 1347 aa33.11■■■□□ 2.89
ZNF48-202ENST00000495929 USP35Q9P2H5 1018 aa33.11■■■□□ 2.89
ZNF48-202ENST00000495929 LARP1Q6PKG0 1096 aaKnown RBP33.09■■■□□ 2.89
ZNF48-202ENST00000495929 KRT27Q7Z3Y8 459 aa33.09■■■□□ 2.89
ZNF48-202ENST00000495929 PIK3C2AO00443 1686 aa33.09■■■□□ 2.89
ZNF48-202ENST00000495929 GLI3P10071 1580 aa33.09■■■□□ 2.89
ZNF48-202ENST00000495929 THRAP3Q9Y2W1 955 aaKnown RBP33.07■■■□□ 2.88
ZNF48-202ENST00000495929 CSB-PGBD3P0DP91 1061 aa33.06■■■□□ 2.88
ZNF48-202ENST00000495929 TCP11L2Q8N4U5 519 aa33.06■■■□□ 2.88
ZNF48-202ENST00000495929 MON2Q7Z3U7 1717 aa33.05■■■□□ 2.88
ZNF48-202ENST00000495929 TOM1L2Q6ZVM7 507 aa33.05■■■□□ 2.88
ZNF48-202ENST00000495929 CCDC125Q86Z20 511 aa33.05■■■□□ 2.88
ZNF48-202ENST00000495929 CAMTA1Q9Y6Y1 1673 aa33.04■■■□□ 2.88
ZNF48-202ENST00000495929 BARGINQ6ZT62 677 aa33.03■■■□□ 2.88
ZNF48-202ENST00000495929 NRAPQ86VF7 1730 aa33.02■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms