RNA–Protein interactions for RNA: ENST00000495777.5

SORT1-208, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 391 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-208ENST00000495777 COL14A1Q05707 1796 aaKnown RBP12.91□□□□□ -0.34
SORT1-208ENST00000495777 ATP7BP35670 1465 aa12.91□□□□□ -0.34
SORT1-208ENST00000495777 SPATA31A5Q5VU36 1347 aa12.9□□□□□ -0.34
SORT1-208ENST00000495777 SPATA31A7Q8IWB4 1347 aa12.9□□□□□ -0.34
SORT1-208ENST00000495777 KDM2AQ9Y2K7 1162 aa12.9□□□□□ -0.34
SORT1-208ENST00000495777 CRYBG1Q9Y4K1 1723 aa12.89□□□□□ -0.35
SORT1-208ENST00000495777 NGDNQ8NEJ9 315 aaKnown RBP12.89□□□□□ -0.35
SORT1-208ENST00000495777 DISP2A7MBM2 1401 aa12.88□□□□□ -0.35
SORT1-208ENST00000495777 THSD7AQ9UPZ6 1657 aa12.87□□□□□ -0.35
SORT1-208ENST00000495777 POLR3AO14802 1390 aaPredicted RBP12.87□□□□□ -0.35
SORT1-208ENST00000495777 BAG6P46379 1132 aa12.87□□□□□ -0.35
SORT1-208ENST00000495777 NUDT16Q96DE0 195 aaKnown RBP12.87□□□□□ -0.35
SORT1-208ENST00000495777 PRDM11Q9NQV5 511 aa12.87□□□□□ -0.35
SORT1-208ENST00000495777 LRP5O75197 1615 aa12.87□□□□□ -0.35
SORT1-208ENST00000495777 A0A0G2JS52 829 aa12.86□□□□□ -0.35
SORT1-208ENST00000495777 MYT1Q01538 1121 aa12.86□□□□□ -0.35
SORT1-208ENST00000495777 SPATA31A1Q5TZJ5 1347 aa12.86□□□□□ -0.35
SORT1-208ENST00000495777 ARHGEF28Q8N1W1 1705 aaKnown RBP12.85□□□□□ -0.35
SORT1-208ENST00000495777 KIAA0232Q92628 1395 aa12.85□□□□□ -0.35
SORT1-208ENST00000495777 PAK3O75914 559 aaPredicted RBP12.85□□□□□ -0.35
SORT1-208ENST00000495777 CDK19Q9BWU1 502 aa12.84□□□□□ -0.35
SORT1-208ENST00000495777 PLEKHG3A1L390 1219 aa12.83□□□□□ -0.36
SORT1-208ENST00000495777 EN1Q05925 392 aaPredicted RBP12.83□□□□□ -0.36
SORT1-208ENST00000495777 TRIM26Q12899 539 aaPredicted RBP12.83□□□□□ -0.36
SORT1-208ENST00000495777 FAM182BQ5T319 152 aa12.83□□□□□ -0.36
SORT1-208ENST00000495777 CCDC61Q9Y6R9 512 aa12.83□□□□□ -0.36
SORT1-208ENST00000495777 ITSN1Q15811 1721 aa12.82□□□□□ -0.36
SORT1-208ENST00000495777 PHRF1Q9P1Y6 1649 aaKnown RBP12.82□□□□□ -0.36
SORT1-208ENST00000495777 PSDA5PKW4 1024 aaPredicted RBP12.82□□□□□ -0.36
SORT1-208ENST00000495777 CHRNA2Q15822 529 aa12.82□□□□□ -0.36
SORT1-208ENST00000495777 NBPF8Q3BBV2 869 aa12.82□□□□□ -0.36
SORT1-208ENST00000495777 TOPAZ1Q8N9V7 1692 aa12.82□□□□□ -0.36
SORT1-208ENST00000495777 ACEP12821 1306 aa12.82□□□□□ -0.36
SORT1-208ENST00000495777 RGPD1P0DJD0 1748 aa12.82□□□□□ -0.36
SORT1-208ENST00000495777 CPDO75976 1380 aa12.81□□□□□ -0.36
SORT1-208ENST00000495777 USP19O94966 1318 aa12.81□□□□□ -0.36
SORT1-208ENST00000495777 SSH2Q76I76 1423 aa12.8□□□□□ -0.36
SORT1-208ENST00000495777 ZC3H6P61129 1189 aaKnown RBP12.8□□□□□ -0.36
SORT1-208ENST00000495777 FAM196AQ6ZSG2 479 aa12.8□□□□□ -0.36
SORT1-208ENST00000495777 BARGINQ6ZT62 677 aa12.8□□□□□ -0.36
SORT1-208ENST00000495777 TNS1Q9HBL0 1735 aaKnown RBP12.79□□□□□ -0.36
SORT1-208ENST00000495777 KIAA1210Q9ULL0 1709 aa12.79□□□□□ -0.36
SORT1-208ENST00000495777 NRKQ7Z2Y5 1582 aa12.79□□□□□ -0.36
SORT1-208ENST00000495777 CAMKK2Q96RR4 588 aa12.79□□□□□ -0.36
SORT1-208ENST00000495777 PARD3Q8TEW0 1356 aa12.79□□□□□ -0.36
SORT1-208ENST00000495777 CAMTA1Q9Y6Y1 1673 aa12.78□□□□□ -0.36
SORT1-208ENST00000495777 EZH2Q15910 746 aaKnown RBP12.78□□□□□ -0.36
SORT1-208ENST00000495777 NBPF1Q3BBV0 1214 aa12.78□□□□□ -0.36
SORT1-208ENST00000495777 NUTM2GQ5VZR2 741 aa12.78□□□□□ -0.36
SORT1-208ENST00000495777 STRN4Q9NRL3 753 aa12.78□□□□□ -0.36
SORT1-208ENST00000495777 BRD4O60885 1362 aaPredicted RBP12.78□□□□□ -0.36
SORT1-208ENST00000495777 LMO7Q8WWI1 1683 aa12.77□□□□□ -0.36
SORT1-208ENST00000495777 R3HDM1Q15032 1099 aaKnown RBP12.77□□□□□ -0.37
SORT1-208ENST00000495777 ABTB2Q8N961 1025 aa12.77□□□□□ -0.37
SORT1-208ENST00000495777 TRIM37O94972 964 aa12.76□□□□□ -0.37
SORT1-208ENST00000495777 LARP1Q6PKG0 1096 aaKnown RBP12.76□□□□□ -0.37
SORT1-208ENST00000495777 GCP02774 474 aa12.75□□□□□ -0.37
SORT1-208ENST00000495777 EVA1CP58658 441 aa12.75□□□□□ -0.37
SORT1-208ENST00000495777 PPIP5K1Q6PFW1 1433 aa12.75□□□□□ -0.37
SORT1-208ENST00000495777 NLRP13Q86W25 1043 aa12.75□□□□□ -0.37
SORT1-208ENST00000495777 TCP11L2Q8N4U5 519 aa12.75□□□□□ -0.37
SORT1-208ENST00000495777 CENPJQ9HC77 1338 aaPredicted RBP12.75□□□□□ -0.37
SORT1-208ENST00000495777 THRAP3Q9Y2W1 955 aaKnown RBP12.75□□□□□ -0.37
SORT1-208ENST00000495777 COL5A2P05997 1499 aaPredicted RBP12.74□□□□□ -0.37
SORT1-208ENST00000495777 USP35Q9P2H5 1018 aa12.74□□□□□ -0.37
SORT1-208ENST00000495777 APBA3O96018 575 aa12.73□□□□□ -0.37
SORT1-208ENST00000495777 SRPK2P78362 688 aaKnown RBP12.73□□□□□ -0.37
SORT1-208ENST00000495777 PDE3BQ13370 1112 aa12.73□□□□□ -0.37
SORT1-208ENST00000495777 USP6P35125 1406 aa12.72□□□□□ -0.37
SORT1-208ENST00000495777 CABP2Q9NPB3 220 aa12.72□□□□□ -0.37
SORT1-208ENST00000495777 SLIT3O75094 1523 aa12.72□□□□□ -0.37
SORT1-208ENST00000495777 AATKQ6ZMQ8 1374 aa12.71□□□□□ -0.37
SORT1-208ENST00000495777 C11orf95C9JLR9 678 aaPredicted RBP12.71□□□□□ -0.37
SORT1-208ENST00000495777 CRB1P82279 1406 aa12.71□□□□□ -0.38
SORT1-208ENST00000495777 RREB1Q92766 1687 aa12.7□□□□□ -0.38
SORT1-208ENST00000495777 CABP1Q9NZU7 370 aa12.7□□□□□ -0.38
SORT1-208ENST00000495777 PARP4Q9UKK3 1724 aaKnown RBP12.69□□□□□ -0.38
SORT1-208ENST00000495777 NLRP6P59044 892 aa12.68□□□□□ -0.38
SORT1-208ENST00000495777 OVOS2A0A0G2JMS6 1433 aa12.68□□□□□ -0.38
SORT1-208ENST00000495777 OVOS2A0A0J9YW53 1432 aa12.68□□□□□ -0.38
SORT1-208ENST00000495777 OVOS2Q6IE36 1432 aa12.68□□□□□ -0.38
SORT1-208ENST00000495777 NUP188Q5SRE5 1749 aa12.68□□□□□ -0.38
SORT1-208ENST00000495777 QRICH2Q9H0J4 1663 aa12.67□□□□□ -0.38
SORT1-208ENST00000495777 NBPF14Q5TI25 921 aa12.67□□□□□ -0.38
SORT1-208ENST00000495777 L3MBTL2Q969R5 705 aa12.67□□□□□ -0.38
SORT1-208ENST00000495777 PEAK1Q9H792 1746 aa12.67□□□□□ -0.38
SORT1-208ENST00000495777 BCL9O00512 1426 aa12.66□□□□□ -0.38
SORT1-208ENST00000495777 PIK3C2AO00443 1686 aa12.66□□□□□ -0.38
SORT1-208ENST00000495777 EVC2Q86UK5 1308 aa12.65□□□□□ -0.38
SORT1-208ENST00000495777 WDR17Q8IZU2 1322 aa12.65□□□□□ -0.38
SORT1-208ENST00000495777 CPSF1Q10570 1443 aaKnown RBP12.65□□□□□ -0.38
SORT1-208ENST00000495777 PLSCR1O15162 318 aa12.65□□□□□ -0.38
SORT1-208ENST00000495777 AXIN2Q9Y2T1 843 aa12.65□□□□□ -0.38
SORT1-208ENST00000495777 LRRC37A3O60309 1634 aa12.65□□□□□ -0.38
SORT1-208ENST00000495777 COL18A1P39060 1754 aa12.64□□□□□ -0.39
SORT1-208ENST00000495777 DDB1Q16531 1140 aa12.64□□□□□ -0.39
SORT1-208ENST00000495777 ARHGEF25Q86VW2 580 aa12.64□□□□□ -0.39
SORT1-208ENST00000495777 ZNF692Q9BU19 519 aaPredicted RBP12.64□□□□□ -0.39
SORT1-208ENST00000495777 TTC21BQ7Z4L5 1316 aa12.63□□□□□ -0.39
SORT1-208ENST00000495777 TOM1L2Q6ZVM7 507 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 1049.7 ms