RNA–Protein interactions for RNA: ENST00000494446.1

FN1-225, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 676 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-225ENST00000494446 NRKQ7Z2Y5 1582 aa10.48□□□□□ -0.73
FN1-225ENST00000494446 MYOM1P52179 1685 aa10.47□□□□□ -0.73
FN1-225ENST00000494446 PHF8Q9UPP1 1060 aa10.47□□□□□ -0.73
FN1-225ENST00000494446 KNDC1Q76NI1 1749 aa10.47□□□□□ -0.73
FN1-225ENST00000494446 UTRNP46939 3433 aa10.46□□□□□ -0.73
FN1-225ENST00000494446 SBNO1A3KN83 1393 aa10.46□□□□□ -0.74
FN1-225ENST00000494446 CASZ1Q86V15 1759 aa10.46□□□□□ -0.74
FN1-225ENST00000494446 ROCK1Q13464 1354 aa10.45□□□□□ -0.74
FN1-225ENST00000494446 PLEKHH1Q9ULM0 1364 aa10.45□□□□□ -0.74
FN1-225ENST00000494446 LOC105371045A0A1W2PR82 267 aa10.45□□□□□ -0.74
FN1-225ENST00000494446 TRPM3Q9HCF6 1732 aaPredicted RBP10.44□□□□□ -0.74
FN1-225ENST00000494446 PPP4R3CPQ6ZMV5 832 aa10.44□□□□□ -0.74
FN1-225ENST00000494446 ALS2Q96Q42 1657 aa10.44□□□□□ -0.74
FN1-225ENST00000494446 NRXN1Q9ULB1 1477 aa10.43□□□□□ -0.74
FN1-225ENST00000494446 RPGRIP1LQ68CZ1 1315 aa10.43□□□□□ -0.74
FN1-225ENST00000494446 SBF2Q86WG5 1849 aa10.43□□□□□ -0.74
FN1-225ENST00000494446 ITGAEP38570 1179 aa10.43□□□□□ -0.74
FN1-225ENST00000494446 PDE3BQ13370 1112 aa10.43□□□□□ -0.74
FN1-225ENST00000494446 CRYBG1Q9Y4K1 1723 aa10.43□□□□□ -0.74
FN1-225ENST00000494446 RRBP1Q9P2E9 1410 aaKnown RBP10.42□□□□□ -0.74
FN1-225ENST00000494446 SPATA31A1Q5TZJ5 1347 aa10.42□□□□□ -0.74
FN1-225ENST00000494446 GIGYF1O75420 1035 aaPredicted RBP10.42□□□□□ -0.74
FN1-225ENST00000494446 PMFBP1Q8TBY8 1022 aa10.42□□□□□ -0.74
FN1-225ENST00000494446 TECPR2O15040 1411 aa10.41□□□□□ -0.74
FN1-225ENST00000494446 ZBTB7AO95365 584 aa10.41□□□□□ -0.74
FN1-225ENST00000494446 TMEM132EQ6IEE7 984 aa10.41□□□□□ -0.74
FN1-225ENST00000494446 PRDM11Q9NQV5 511 aa10.41□□□□□ -0.74
FN1-225ENST00000494446 STRN4Q9NRL3 753 aa10.41□□□□□ -0.74
FN1-225ENST00000494446 USP35Q9P2H5 1018 aa10.41□□□□□ -0.74
FN1-225ENST00000494446 RGPD3A6NKT7 1758 aaPredicted RBP10.4□□□□□ -0.74
FN1-225ENST00000494446 RGPD4Q7Z3J3 1758 aa10.4□□□□□ -0.74
FN1-225ENST00000494446 PDGFDQ9GZP0 370 aaPredicted RBP10.4□□□□□ -0.74
FN1-225ENST00000494446 ATF5Q9Y2D1 282 aaPredicted RBP10.4□□□□□ -0.74
FN1-225ENST00000494446 ABCC11Q96J66 1382 aa10.39□□□□□ -0.75
FN1-225ENST00000494446 SYT17Q9BSW7 474 aa10.39□□□□□ -0.75
FN1-225ENST00000494446 FHDC1Q9C0D6 1143 aaPredicted RBP10.39□□□□□ -0.75
FN1-225ENST00000494446 ADGRF5Q8IZF2 1346 aa10.38□□□□□ -0.75
FN1-225ENST00000494446 CHRNA2Q15822 529 aa10.38□□□□□ -0.75
FN1-225ENST00000494446 ANO8Q9HCE9 1232 aaPredicted RBP10.38□□□□□ -0.75
FN1-225ENST00000494446 RNF216Q9NWF9 866 aaPredicted RBP10.38□□□□□ -0.75
FN1-225ENST00000494446 PTGER2P43116 358 aa10.37□□□□□ -0.75
FN1-225ENST00000494446 EVA1CP58658 441 aa10.37□□□□□ -0.75
FN1-225ENST00000494446 SAFB2Q14151 953 aaKnown RBP eCLIP10.37□□□□□ -0.75
FN1-225ENST00000494446 DLC1Q96QB1 1528 aa10.37□□□□□ -0.75
FN1-225ENST00000494446 PHRF1Q9P1Y6 1649 aaKnown RBP10.36□□□□□ -0.75
FN1-225ENST00000494446 YTHDC2Q9H6S0 1430 aaKnown RBP10.36□□□□□ -0.75
FN1-225ENST00000494446 PAK3O75914 559 aaPredicted RBP10.36□□□□□ -0.75
FN1-225ENST00000494446 CNKSR2Q8WXI2 1034 aa10.36□□□□□ -0.75
FN1-225ENST00000494446 BCL11BQ9C0K0 894 aaPredicted RBP10.36□□□□□ -0.75
FN1-225ENST00000494446 GPRASP1Q5JY77 1395 aa10.36□□□□□ -0.75
FN1-225ENST00000494446 KIAA0232Q92628 1395 aa10.36□□□□□ -0.75
FN1-225ENST00000494446 PARP4Q9UKK3 1724 aaKnown RBP10.36□□□□□ -0.75
FN1-225ENST00000494446 BARGINQ6ZT62 677 aa10.35□□□□□ -0.75
FN1-225ENST00000494446 ZC3H6P61129 1189 aaKnown RBP10.34□□□□□ -0.75
FN1-225ENST00000494446 GPR162Q16538 588 aa10.34□□□□□ -0.75
FN1-225ENST00000494446 RGL3Q3MIN7 710 aa10.34□□□□□ -0.75
FN1-225ENST00000494446 SHANK3Q9BYB0 1731 aa10.33□□□□□ -0.76
FN1-225ENST00000494446 PEAK1Q9H792 1746 aa10.33□□□□□ -0.76
FN1-225ENST00000494446 PLSCR1O15162 318 aa10.33□□□□□ -0.76
FN1-225ENST00000494446 SIRT1Q96EB6 747 aa10.33□□□□□ -0.76
FN1-225ENST00000494446 SSH2Q76I76 1423 aa10.33□□□□□ -0.76
FN1-225ENST00000494446 ANKARQ7Z5J8 1434 aa10.33□□□□□ -0.76
FN1-225ENST00000494446 ACIN1Q9UKV3 1341 aaKnown RBP10.33□□□□□ -0.76
FN1-225ENST00000494446 AKAP12Q02952 1782 aa10.32□□□□□ -0.76
FN1-225ENST00000494446 LARP1Q6PKG0 1096 aaKnown RBP10.32□□□□□ -0.76
FN1-225ENST00000494446 TCP11L2Q8N4U5 519 aa10.32□□□□□ -0.76
FN1-225ENST00000494446 KAT6BQ8WYB5 2073 aa10.32□□□□□ -0.76
FN1-225ENST00000494446 C11orf95C9JLR9 678 aaPredicted RBP10.31□□□□□ -0.76
FN1-225ENST00000494446 PELP1Q8IZL8 1130 aaKnown RBP10.31□□□□□ -0.76
FN1-225ENST00000494446 NGDNQ8NEJ9 315 aaKnown RBP10.31□□□□□ -0.76
FN1-225ENST00000494446 PRAM1Q96QH2 718 aa10.31□□□□□ -0.76
FN1-225ENST00000494446 ARXQ96QS3 562 aa10.31□□□□□ -0.76
FN1-225ENST00000494446 STK32BQ9NY57 414 aa10.31□□□□□ -0.76
FN1-225ENST00000494446 POGKQ9P215 609 aa10.31□□□□□ -0.76
FN1-225ENST00000494446 NUTM2GQ5VZR2 741 aa10.3□□□□□ -0.76
FN1-225ENST00000494446 PTF1AQ7RTS3 328 aa10.3□□□□□ -0.76
FN1-225ENST00000494446 PROM2Q8N271 834 aa10.3□□□□□ -0.76
FN1-225ENST00000494446 MTFR1LQ9H019 292 aa10.3□□□□□ -0.76
FN1-225ENST00000494446 OVOS2A0A0G2JMS6 1433 aa10.3□□□□□ -0.76
FN1-225ENST00000494446 OVOS2A0A0J9YW53 1432 aa10.3□□□□□ -0.76
FN1-225ENST00000494446 OVOS2Q6IE36 1432 aa10.3□□□□□ -0.76
FN1-225ENST00000494446 ANKRD30BQ9BXX2 1392 aa10.29□□□□□ -0.76
FN1-225ENST00000494446 SLC15A2Q16348 729 aa10.29□□□□□ -0.76
FN1-225ENST00000494446 POTEHQ6S545 545 aa10.29□□□□□ -0.76
FN1-225ENST00000494446 KLHL34Q8N239 644 aa10.29□□□□□ -0.76
FN1-225ENST00000494446 SGIP1Q9BQI5 828 aa10.29□□□□□ -0.76
FN1-225ENST00000494446 HIRIP3Q9BW71 556 aaPredicted RBP10.29□□□□□ -0.76
FN1-225ENST00000494446 PIK3C2GO75747 1445 aa10.29□□□□□ -0.76
FN1-225ENST00000494446 ITSN1Q15811 1721 aa10.29□□□□□ -0.76
FN1-225ENST00000494446 DHX57Q6P158 1386 aaKnown RBP10.28□□□□□ -0.76
FN1-225ENST00000494446 GOLGB1Q14789 3259 aaKnown RBP10.28□□□□□ -0.76
FN1-225ENST00000494446 SLC4A1APQ9BWU0 796 aaKnown RBP10.28□□□□□ -0.76
FN1-225ENST00000494446 THRAP3Q9Y2W1 955 aaKnown RBP10.28□□□□□ -0.76
FN1-225ENST00000494446 LRRC37A3O60309 1634 aa10.28□□□□□ -0.76
FN1-225ENST00000494446 WNK3Q9BYP7 1800 aa10.28□□□□□ -0.76
FN1-225ENST00000494446 LMO7Q8WWI1 1683 aa10.28□□□□□ -0.76
FN1-225ENST00000494446 PRR36Q9H6K5 1346 aa10.27□□□□□ -0.77
FN1-225ENST00000494446 ATP7BP35670 1465 aa10.26□□□□□ -0.77
FN1-225ENST00000494446 HSPA6P17066 643 aa10.26□□□□□ -0.77
FN1-225ENST00000494446 TXNRD1Q16881 649 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms