RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 HECW1Q76N89 1606 aa10.11□□□□□ -0.79
TRA2B-216ENST00000493864 LRRIQ1Q96JM4 1722 aa10.11□□□□□ -0.79
TRA2B-216ENST00000493864 MOXD2PA6NHM9 499 aa10.11□□□□□ -0.79
TRA2B-216ENST00000493864 NDUFV2P19404 249 aa10.11□□□□□ -0.79
TRA2B-216ENST00000493864 APLP1P51693 650 aa10.11□□□□□ -0.79
TRA2B-216ENST00000493864 SPNS2Q8IVW8 549 aa10.11□□□□□ -0.79
TRA2B-216ENST00000493864 UHRF1BP1LA0JNW5 1464 aa10.1□□□□□ -0.79
TRA2B-216ENST00000493864 HOXA2O43364 376 aa10.1□□□□□ -0.79
TRA2B-216ENST00000493864 CLK2P49760 499 aaKnown RBP10.1□□□□□ -0.79
TRA2B-216ENST00000493864 RIC3Q7Z5B4 369 aa10.1□□□□□ -0.79
TRA2B-216ENST00000493864 PRR14Q9BWN1 585 aa10.1□□□□□ -0.79
TRA2B-216ENST00000493864 MAP3K1Q13233 1512 aa10.1□□□□□ -0.79
TRA2B-216ENST00000493864 ABCC10Q5T3U5 1492 aa10.1□□□□□ -0.79
TRA2B-216ENST00000493864 TIAM1Q13009 1591 aa10.09□□□□□ -0.79
TRA2B-216ENST00000493864 ACTN4O43707 911 aaKnown RBP10.09□□□□□ -0.79
TRA2B-216ENST00000493864 PROCA1Q8NCQ7 364 aaPredicted RBP10.09□□□□□ -0.79
TRA2B-216ENST00000493864 HLA-CQ95604 372 aa10.09□□□□□ -0.79
TRA2B-216ENST00000493864 LIMD1Q9UGP4 676 aa10.09□□□□□ -0.79
TRA2B-216ENST00000493864 PLEKHD1A6NEE1 506 aa10.08□□□□□ -0.8
TRA2B-216ENST00000493864 ATP6V1AP38606 617 aa10.08□□□□□ -0.8
TRA2B-216ENST00000493864 PUS10Q3MIT2 529 aaKnown RBP10.08□□□□□ -0.8
TRA2B-216ENST00000493864 GRIPAP1Q4V328 841 aa10.08□□□□□ -0.8
TRA2B-216ENST00000493864 RSBN1LQ6PCB5 846 aaPredicted RBP10.08□□□□□ -0.8
TRA2B-216ENST00000493864 CDK11AQ9UQ88 783 aaPredicted RBP10.08□□□□□ -0.8
TRA2B-216ENST00000493864 CCDC18Q5T9S5 1454 aa10.08□□□□□ -0.8
TRA2B-216ENST00000493864 PPRC1Q5VV67 1664 aaKnown RBP10.08□□□□□ -0.8
TRA2B-216ENST00000493864 ASXL2Q76L83 1435 aa10.07□□□□□ -0.8
TRA2B-216ENST00000493864 KDM5BQ9UGL1 1544 aa10.07□□□□□ -0.8
TRA2B-216ENST00000493864 LRRC9Q6ZRR7 1453 aa10.07□□□□□ -0.8
TRA2B-216ENST00000493864 SPTLC1O15269 473 aa10.07□□□□□ -0.8
TRA2B-216ENST00000493864 GUCA2AQ02747 115 aa10.07□□□□□ -0.8
TRA2B-216ENST00000493864 FAM69CQ0P6D2 419 aa10.07□□□□□ -0.8
TRA2B-216ENST00000493864 CSPP1Q1MSJ5 1256 aa10.07□□□□□ -0.8
TRA2B-216ENST00000493864 MTUS2Q5JR59 1369 aa10.06□□□□□ -0.8
TRA2B-216ENST00000493864 FDX1P10109 184 aa10.06□□□□□ -0.8
TRA2B-216ENST00000493864 RNF166Q96A37 237 aaPredicted RBP10.06□□□□□ -0.8
TRA2B-216ENST00000493864 MAGI3Q5TCQ9 1506 aa10.06□□□□□ -0.8
TRA2B-216ENST00000493864 CFAP43Q8NDM7 1665 aa10.06□□□□□ -0.8
TRA2B-216ENST00000493864 PCDHB3Q9Y5E6 796 aa10.05□□□□□ -0.8
TRA2B-216ENST00000493864 PCDHB15Q9Y5E8 787 aa10.05□□□□□ -0.8
TRA2B-216ENST00000493864 GTF3C3Q9Y5Q9 886 aa10.05□□□□□ -0.8
TRA2B-216ENST00000493864 GJA5P36382 358 aa10.03□□□□□ -0.8
TRA2B-216ENST00000493864 MORN1Q5T089 497 aa10.03□□□□□ -0.8
TRA2B-216ENST00000493864 NYAP1Q6ZVC0 841 aa10.03□□□□□ -0.8
TRA2B-216ENST00000493864 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.03□□□□□ -0.8
TRA2B-216ENST00000493864 PCDHGC3Q9UN70 934 aa10.03□□□□□ -0.8
TRA2B-216ENST00000493864 MAP3K4Q9Y6R4 1608 aa10.03□□□□□ -0.8
TRA2B-216ENST00000493864 TROQ12816 1431 aaPredicted RBP10.02□□□□□ -0.81
TRA2B-216ENST00000493864 GLI2P10070 1586 aa10.01□□□□□ -0.81
TRA2B-216ENST00000493864 COPS2P61201 443 aa10.01□□□□□ -0.81
TRA2B-216ENST00000493864 TUSC1Q2TAM9 212 aa10.01□□□□□ -0.81
TRA2B-216ENST00000493864 BLOC1S3Q6QNY0 202 aa10.01□□□□□ -0.81
TRA2B-216ENST00000493864 SLC27A5Q9Y2P5 690 aa10.01□□□□□ -0.81
TRA2B-216ENST00000493864 WDR7Q9Y4E6 1490 aa10.01□□□□□ -0.81
TRA2B-216ENST00000493864 QPCTQ16769 361 aa10□□□□□ -0.81
TRA2B-216ENST00000493864 CABLES1Q8TDN4 633 aa10□□□□□ -0.81
TRA2B-216ENST00000493864 KDM6BO15054 1643 aa10□□□□□ -0.81
TRA2B-216ENST00000493864 EHBP1L1Q8N3D4 1523 aa9.99□□□□□ -0.81
TRA2B-216ENST00000493864 NUTM2BA6NNL0 878 aaPredicted RBP9.99□□□□□ -0.81
TRA2B-216ENST00000493864 NUTM2EB1AL46 878 aaPredicted RBP9.99□□□□□ -0.81
TRA2B-216ENST00000493864 C6orf229H3BNL8 230 aa9.99□□□□□ -0.81
TRA2B-216ENST00000493864 NR1I2O75469 434 aa9.99□□□□□ -0.81
TRA2B-216ENST00000493864 NUTM2DQ5VT03 806 aaPredicted RBP9.99□□□□□ -0.81
TRA2B-216ENST00000493864 NUTM2AQ8IVF1 878 aaPredicted RBP9.99□□□□□ -0.81
TRA2B-216ENST00000493864 HCSTQ9UBK5 93 aa9.99□□□□□ -0.81
TRA2B-216ENST00000493864 PHLDB1Q86UU1 1377 aa9.99□□□□□ -0.81
TRA2B-216ENST00000493864 NCOA2Q15596 1464 aa9.98□□□□□ -0.81
TRA2B-216ENST00000493864 LILRB3O75022 631 aa9.98□□□□□ -0.81
TRA2B-216ENST00000493864 HRCP23327 699 aa9.98□□□□□ -0.81
TRA2B-216ENST00000493864 MMRN1Q13201 1228 aa9.98□□□□□ -0.81
TRA2B-216ENST00000493864 FBXO31Q5XUX0 539 aaPredicted RBP9.98□□□□□ -0.81
TRA2B-216ENST00000493864 SCUBE3Q8IX30 993 aa9.98□□□□□ -0.81
TRA2B-216ENST00000493864 SYMPKQ92797 1274 aaKnown RBP9.98□□□□□ -0.81
TRA2B-216ENST00000493864 ZBTB3Q9H5J0 574 aa9.98□□□□□ -0.81
TRA2B-216ENST00000493864 TRIM26Q12899 539 aaPredicted RBP9.97□□□□□ -0.81
TRA2B-216ENST00000493864 MTMR2Q13614 643 aa9.97□□□□□ -0.81
TRA2B-216ENST00000493864 Q3C1V9 767 aa9.97□□□□□ -0.81
TRA2B-216ENST00000493864 PRPF38BQ5VTL8 546 aaKnown RBP9.97□□□□□ -0.81
TRA2B-216ENST00000493864 MTRQ99707 1265 aa9.97□□□□□ -0.81
TRA2B-216ENST00000493864 KIF14Q15058 1648 aa9.96□□□□□ -0.81
TRA2B-216ENST00000493864 SUPT6HQ7KZ85 1726 aaKnown RBP9.96□□□□□ -0.81
TRA2B-216ENST00000493864 RTL5Q5HYW3 569 aaPredicted RBP9.96□□□□□ -0.82
TRA2B-216ENST00000493864 CCNB3Q8WWL7 1395 aa9.96□□□□□ -0.82
TRA2B-216ENST00000493864 RFC5P40937 340 aa9.95□□□□□ -0.82
TRA2B-216ENST00000493864 RNF19BQ6ZMZ0 732 aa9.95□□□□□ -0.82
TRA2B-216ENST00000493864 PPP2R2DQ66LE6 453 aa9.94□□□□□ -0.82
TRA2B-216ENST00000493864 ABCA9Q8IUA7 1624 aa9.93□□□□□ -0.82
TRA2B-216ENST00000493864 GPATCH8Q9UKJ3 1502 aaKnown RBP9.93□□□□□ -0.82
TRA2B-216ENST00000493864 MYOM3Q5VTT5 1437 aa9.93□□□□□ -0.82
TRA2B-216ENST00000493864 FMNL1O95466 1100 aaPredicted RBP9.93□□□□□ -0.82
TRA2B-216ENST00000493864 TJAP1Q5JTD0 557 aa9.93□□□□□ -0.82
TRA2B-216ENST00000493864 PCGF6Q9BYE7 350 aa9.93□□□□□ -0.82
TRA2B-216ENST00000493864 CFDP1Q9UEE9 299 aaPredicted RBP9.93□□□□□ -0.82
TRA2B-216ENST00000493864 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.92□□□□□ -0.82
TRA2B-216ENST00000493864 ZNF644Q9H582 1327 aaPredicted RBP9.92□□□□□ -0.82
TRA2B-216ENST00000493864 SPDYE5A6NIY4 337 aa9.92□□□□□ -0.82
TRA2B-216ENST00000493864 ZPR1O75312 459 aa9.92□□□□□ -0.82
TRA2B-216ENST00000493864 FAM50AQ14320 339 aaKnown RBP9.92□□□□□ -0.82
TRA2B-216ENST00000493864 BRICD5Q6PL45 260 aa9.92□□□□□ -0.82
TRA2B-216ENST00000493864 TSC1Q92574 1164 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms