RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 DCCP43146 1447 aa19.06■□□□□ 0.64
PDZRN3-210ENST00000492909 BRD4O60885 1362 aaPredicted RBP19.05■□□□□ 0.64
PDZRN3-210ENST00000492909 MST1RQ04912 1400 aa19.04■□□□□ 0.64
PDZRN3-210ENST00000492909 POLR3AO14802 1390 aaPredicted RBP19.04■□□□□ 0.64
PDZRN3-210ENST00000492909 PMFBP1Q8TBY8 1022 aa19.04■□□□□ 0.64
PDZRN3-210ENST00000492909 MORC1Q86VD1 984 aa19.04■□□□□ 0.64
PDZRN3-210ENST00000492909 NRKQ7Z2Y5 1582 aa19.03■□□□□ 0.64
PDZRN3-210ENST00000492909 NGDNQ8NEJ9 315 aaKnown RBP19.03■□□□□ 0.64
PDZRN3-210ENST00000492909 USP6P35125 1406 aa19.02■□□□□ 0.64
PDZRN3-210ENST00000492909 FYB1O15117 783 aa19.02■□□□□ 0.64
PDZRN3-210ENST00000492909 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.02■□□□□ 0.64
PDZRN3-210ENST00000492909 PPP2R1AP30153 589 aa19.01■□□□□ 0.63
PDZRN3-210ENST00000492909 GGNBP2Q9H3C7 697 aa19.01■□□□□ 0.63
PDZRN3-210ENST00000492909 PHF8Q9UPP1 1060 aa19.01■□□□□ 0.63
PDZRN3-210ENST00000492909 C1orf167Q5SNV9 1468 aa19.01■□□□□ 0.63
PDZRN3-210ENST00000492909 ILDR1Q86SU0 546 aaPredicted RBP19■□□□□ 0.63
PDZRN3-210ENST00000492909 ROBO1Q9Y6N7 1651 aa18.99■□□□□ 0.63
PDZRN3-210ENST00000492909 ESCO1Q5FWF5 840 aa18.99■□□□□ 0.63
PDZRN3-210ENST00000492909 ORAI2Q96SN7 254 aa18.99■□□□□ 0.63
PDZRN3-210ENST00000492909 BRINP3Q76B58 766 aa18.98■□□□□ 0.63
PDZRN3-210ENST00000492909 TTC21BQ7Z4L5 1316 aa18.97■□□□□ 0.63
PDZRN3-210ENST00000492909 KIF1AQ12756 1690 aa18.97■□□□□ 0.63
PDZRN3-210ENST00000492909 SSH2Q76I76 1423 aa18.97■□□□□ 0.63
PDZRN3-210ENST00000492909 NME9Q86XW9 330 aa18.96■□□□□ 0.63
PDZRN3-210ENST00000492909 DDX17Q92841 729 aaKnown RBP18.96■□□□□ 0.63
PDZRN3-210ENST00000492909 TNNT2P45379 298 aaPredicted RBP18.96■□□□□ 0.63
PDZRN3-210ENST00000492909 TTC21AQ8NDW8 1320 aa18.95■□□□□ 0.62
PDZRN3-210ENST00000492909 FAM9BQ8IZU0 186 aa18.94■□□□□ 0.62
PDZRN3-210ENST00000492909 HSPA1LP34931 641 aa18.93■□□□□ 0.62
PDZRN3-210ENST00000492909 PNISRQ8TF01 805 aaKnown RBP18.93■□□□□ 0.62
PDZRN3-210ENST00000492909 COG3Q96JB2 828 aa18.93■□□□□ 0.62
PDZRN3-210ENST00000492909 PSME1Q06323 249 aa18.91■□□□□ 0.62
PDZRN3-210ENST00000492909 ZRANB1Q9UGI0 708 aa18.91■□□□□ 0.62
PDZRN3-210ENST00000492909 PIK3C2AO00443 1686 aa18.9■□□□□ 0.62
PDZRN3-210ENST00000492909 MAP2P11137 1827 aaKnown RBP18.89■□□□□ 0.62
PDZRN3-210ENST00000492909 FOXO3O43524 673 aa18.89■□□□□ 0.61
PDZRN3-210ENST00000492909 XPCQ01831 940 aaPredicted RBP18.89■□□□□ 0.61
PDZRN3-210ENST00000492909 OVOS2A0A0J9YW53 1432 aa18.89■□□□□ 0.61
PDZRN3-210ENST00000492909 OVOS2Q6IE36 1432 aa18.89■□□□□ 0.61
PDZRN3-210ENST00000492909 MTHFSP49914 203 aa18.88■□□□□ 0.61
PDZRN3-210ENST00000492909 PAK3O75914 559 aaPredicted RBP18.87■□□□□ 0.61
PDZRN3-210ENST00000492909 USP31Q70CQ4 1352 aa18.87■□□□□ 0.61
PDZRN3-210ENST00000492909 USP54Q70EL1 1684 aa18.87■□□□□ 0.61
PDZRN3-210ENST00000492909 PHLPP1O60346 1717 aa18.86■□□□□ 0.61
PDZRN3-210ENST00000492909 AATKQ6ZMQ8 1374 aa18.86■□□□□ 0.61
PDZRN3-210ENST00000492909 CFAP53Q96M91 514 aa18.86■□□□□ 0.61
PDZRN3-210ENST00000492909 TRPM3Q9HCF6 1732 aaPredicted RBP18.85■□□□□ 0.61
PDZRN3-210ENST00000492909 ABTB2Q8N961 1025 aa18.85■□□□□ 0.61
PDZRN3-210ENST00000492909 NHSL1Q5SYE7 1610 aa18.85■□□□□ 0.61
PDZRN3-210ENST00000492909 AHDC1Q5TGY3 1603 aaPredicted RBP18.85■□□□□ 0.61
PDZRN3-210ENST00000492909 MARF1Q9Y4F3 1742 aaKnown RBP18.84■□□□□ 0.61
PDZRN3-210ENST00000492909 NPHP3Q7Z494 1330 aa18.84■□□□□ 0.61
PDZRN3-210ENST00000492909 NLRP6P59044 892 aa18.83■□□□□ 0.61
PDZRN3-210ENST00000492909 WDR43Q15061 677 aaKnown RBP eCLIP18.83■□□□□ 0.61
PDZRN3-210ENST00000492909 KRT28Q7Z3Y7 464 aa18.83■□□□□ 0.61
PDZRN3-210ENST00000492909 COL16A1Q07092 1604 aaPredicted RBP18.82■□□□□ 0.6
PDZRN3-210ENST00000492909 POLKQ9UBT6 870 aa18.82■□□□□ 0.6
PDZRN3-210ENST00000492909 SHPRHQ149N8 1683 aa18.81■□□□□ 0.6
PDZRN3-210ENST00000492909 FBLN1P23142 703 aa18.81■□□□□ 0.6
PDZRN3-210ENST00000492909 HNRNPUQ00839 825 aaKnown RBP eCLIP18.81■□□□□ 0.6
PDZRN3-210ENST00000492909 SMG6Q86US8 1419 aaKnown RBP18.81■□□□□ 0.6
PDZRN3-210ENST00000492909 INSRP06213 1382 aa18.8■□□□□ 0.6
PDZRN3-210ENST00000492909 PXDNQ92626 1479 aa18.8■□□□□ 0.6
PDZRN3-210ENST00000492909 SOS2Q07890 1332 aaPredicted RBP18.8■□□□□ 0.6
PDZRN3-210ENST00000492909 NUTM2GQ5VZR2 741 aa18.8■□□□□ 0.6
PDZRN3-210ENST00000492909 ALS2Q96Q42 1657 aa18.79■□□□□ 0.6
PDZRN3-210ENST00000492909 ADAMTS8Q9UP79 889 aa18.79■□□□□ 0.6
PDZRN3-210ENST00000492909 PNPLA6Q8IY17 1366 aa18.79■□□□□ 0.6
PDZRN3-210ENST00000492909 PPM1GO15355 546 aaPredicted RBP18.78■□□□□ 0.6
PDZRN3-210ENST00000492909 EMILIN1Q9Y6C2 1016 aa18.78■□□□□ 0.6
PDZRN3-210ENST00000492909 COL3A1P02461 1466 aaPredicted RBP18.78■□□□□ 0.6
PDZRN3-210ENST00000492909 CDK12Q9NYV4 1490 aaPredicted RBP18.78■□□□□ 0.6
PDZRN3-210ENST00000492909 RRS1Q15050 365 aaKnown RBP18.78■□□□□ 0.6
PDZRN3-210ENST00000492909 SBNO1A3KN83 1393 aa18.78■□□□□ 0.6
PDZRN3-210ENST00000492909 SOX12O15370 315 aa18.76■□□□□ 0.59
PDZRN3-210ENST00000492909 BLMP54132 1417 aaPredicted RBP18.76■□□□□ 0.59
PDZRN3-210ENST00000492909 LMOD2Q6P5Q4 547 aa18.76■□□□□ 0.59
PDZRN3-210ENST00000492909 LRRC59Q96AG4 307 aaKnown RBP18.75■□□□□ 0.59
PDZRN3-210ENST00000492909 NUDCQ9Y266 331 aa18.75■□□□□ 0.59
PDZRN3-210ENST00000492909 PLEKHG5O94827 1062 aa18.74■□□□□ 0.59
PDZRN3-210ENST00000492909 TNS3Q68CZ2 1445 aa18.73■□□□□ 0.59
PDZRN3-210ENST00000492909 DIAPH1O60610 1272 aaKnown RBP18.73■□□□□ 0.59
PDZRN3-210ENST00000492909 PEAK1Q9H792 1746 aa18.73■□□□□ 0.59
PDZRN3-210ENST00000492909 KCNH5Q8NCM2 988 aa18.73■□□□□ 0.59
PDZRN3-210ENST00000492909 MAP3K19Q56UN5 1328 aa18.72■□□□□ 0.59
PDZRN3-210ENST00000492909 LTN1O94822 1766 aa18.72■□□□□ 0.59
PDZRN3-210ENST00000492909 SLIT3O75094 1523 aa18.72■□□□□ 0.59
PDZRN3-210ENST00000492909 SPATA31A3Q5VYP0 1347 aa18.72■□□□□ 0.59
PDZRN3-210ENST00000492909 JCADQ9P266 1359 aa18.72■□□□□ 0.59
PDZRN3-210ENST00000492909 NFAT5O94916 1531 aa18.71■□□□□ 0.59
PDZRN3-210ENST00000492909 USP19O94966 1318 aa18.71■□□□□ 0.59
PDZRN3-210ENST00000492909 ZBED9Q6R2W3 1325 aa18.71■□□□□ 0.59
PDZRN3-210ENST00000492909 ARHGEF10O15013 1369 aa18.7■□□□□ 0.58
PDZRN3-210ENST00000492909 KIF24Q5T7B8 1368 aa18.7■□□□□ 0.58
PDZRN3-210ENST00000492909 U2SURPO15042 1029 aaKnown RBP18.7■□□□□ 0.58
PDZRN3-210ENST00000492909 U2AF1L5P0DN76 240 aaPredicted RBP18.7■□□□□ 0.58
PDZRN3-210ENST00000492909 U2AF1Q01081 240 aaKnown RBP eCLIP18.7■□□□□ 0.58
PDZRN3-210ENST00000492909 FLT4P35916 1363 aa18.7■□□□□ 0.58
PDZRN3-210ENST00000492909 AMPHP49418 695 aa18.69■□□□□ 0.58
PDZRN3-210ENST00000492909 SUPT16HQ9Y5B9 1047 aaKnown RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms