RNA–Protein interactions for RNA: ENST00000492275.5

TTC3-223, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 3

Gene TTC3, Length 769 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-223ENST00000492275 CPSF1Q10570 1443 aaKnown RBP36.17■■■■□ 3.38
TTC3-223ENST00000492275 SLC12A5Q9H2X9 1139 aa36.17■■■■□ 3.38
TTC3-223ENST00000492275 ABCA3Q99758 1704 aa36.17■■■■□ 3.38
TTC3-223ENST00000492275 MARF1Q9Y4F3 1742 aaKnown RBP36.17■■■■□ 3.38
TTC3-223ENST00000492275 PLEKHG5O94827 1062 aa36.16■■■■□ 3.38
TTC3-223ENST00000492275 TMC1Q8TDI8 760 aa36.16■■■■□ 3.38
TTC3-223ENST00000492275 ZNF692Q9BU19 519 aaPredicted RBP36.16■■■■□ 3.38
TTC3-223ENST00000492275 SSH2Q76I76 1423 aa36.15■■■■□ 3.38
TTC3-223ENST00000492275 BRD4O60885 1362 aaPredicted RBP36.15■■■■□ 3.38
TTC3-223ENST00000492275 CD163L1Q9NR16 1453 aa36.14■■■■□ 3.38
TTC3-223ENST00000492275 C8orf37Q96NL8 207 aa36.13■■■■□ 3.37
TTC3-223ENST00000492275 CRYBG1Q9Y4K1 1723 aa36.11■■■■□ 3.37
TTC3-223ENST00000492275 NUTM2GQ5VZR2 741 aa36.1■■■■□ 3.37
TTC3-223ENST00000492275 ABTB2Q8N961 1025 aa36.1■■■■□ 3.37
TTC3-223ENST00000492275 MON2Q7Z3U7 1717 aa36.1■■■■□ 3.37
TTC3-223ENST00000492275 KTN1Q86UP2 1357 aaKnown RBP36.08■■■■□ 3.37
TTC3-223ENST00000492275 NGLY1Q96IV0 654 aa36.08■■■■□ 3.37
TTC3-223ENST00000492275 AFF2P51816 1311 aa36.08■■■■□ 3.37
TTC3-223ENST00000492275 HAP1P54257 671 aaPredicted RBP36.07■■■■□ 3.36
TTC3-223ENST00000492275 CDCA8Q53HL2 280 aa36.07■■■■□ 3.36
TTC3-223ENST00000492275 POTEAQ6S8J7 498 aa36.07■■■■□ 3.36
TTC3-223ENST00000492275 ILDR2Q71H61 639 aa36.06■■■■□ 3.36
TTC3-223ENST00000492275 NRKQ7Z2Y5 1582 aa36.06■■■■□ 3.36
TTC3-223ENST00000492275 TTC21BQ7Z4L5 1316 aa36.06■■■■□ 3.36
TTC3-223ENST00000492275 NINLQ9Y2I6 1382 aa36.05■■■■□ 3.36
TTC3-223ENST00000492275 HDGFL2Q7Z4V5 671 aaPredicted RBP36.03■■■■□ 3.36
TTC3-223ENST00000492275 ZNF772Q68DY9 489 aaPredicted RBP36.02■■■■□ 3.36
TTC3-223ENST00000492275 FNBP4Q8N3X1 1017 aaPredicted RBP36.02■■■■□ 3.36
TTC3-223ENST00000492275 TERF2IPQ9NYB0 399 aa36.02■■■■□ 3.36
TTC3-223ENST00000492275 PIK3C2AO00443 1686 aa36.02■■■■□ 3.36
TTC3-223ENST00000492275 A0A1W2PP64 1363 aa36.02■■■■□ 3.36
TTC3-223ENST00000492275 PHRF1Q9P1Y6 1649 aaKnown RBP36.01■■■■□ 3.35
TTC3-223ENST00000492275 NLRP13Q86W25 1043 aa35.99■■■■□ 3.35
TTC3-223ENST00000492275 USP19O94966 1318 aa35.98■■■■□ 3.35
TTC3-223ENST00000492275 TTC21AQ8NDW8 1320 aa35.98■■■■□ 3.35
TTC3-223ENST00000492275 NLRP6P59044 892 aa35.97■■■■□ 3.35
TTC3-223ENST00000492275 MYOM1P52179 1685 aa35.97■■■■□ 3.35
TTC3-223ENST00000492275 FAM83GA6ND36 823 aa35.96■■■■□ 3.35
TTC3-223ENST00000492275 C11orf95C9JLR9 678 aaPredicted RBP35.94■■■■□ 3.34
TTC3-223ENST00000492275 SUGP2Q8IX01 1082 aaKnown RBP eCLIP35.94■■■■□ 3.347e-7■■■■■ 27.2
TTC3-223ENST00000492275 USP21Q9UK80 565 aa35.94■■■■□ 3.34
TTC3-223ENST00000492275 EDC4Q6P2E9 1401 aaKnown RBP35.93■■■■□ 3.34
TTC3-223ENST00000492275 ANKRD36BQ8N2N9 1353 aa35.93■■■■□ 3.34
TTC3-223ENST00000492275 SLIT2O94813 1529 aa35.93■■■■□ 3.34
TTC3-223ENST00000492275 BCL9LQ86UU0 1499 aa35.92■■■■□ 3.34
TTC3-223ENST00000492275 GCP02774 474 aa35.9■■■■□ 3.34
TTC3-223ENST00000492275 PLCH1Q4KWH8 1693 aa35.9■■■■□ 3.34
TTC3-223ENST00000492275 NME9Q86XW9 330 aa35.89■■■■□ 3.34
TTC3-223ENST00000492275 QTRT2Q9H974 415 aaKnown RBP35.89■■■■□ 3.34
TTC3-223ENST00000492275 ZRANB1Q9UGI0 708 aa35.89■■■■□ 3.34
TTC3-223ENST00000492275 ZC3H6P61129 1189 aaKnown RBP35.88■■■■□ 3.33
TTC3-223ENST00000492275 POLR3GLQ9BT43 218 aa35.88■■■■□ 3.33
TTC3-223ENST00000492275 SLIT3O75094 1523 aa35.88■■■■□ 3.33
TTC3-223ENST00000492275 COL14A1Q05707 1796 aaKnown RBP35.87■■■■□ 3.33
TTC3-223ENST00000492275 KIAA0232Q92628 1395 aa35.87■■■■□ 3.33
TTC3-223ENST00000492275 NWD2Q9ULI1 1742 aa35.86■■■■□ 3.33
TTC3-223ENST00000492275 USP31Q70CQ4 1352 aa35.86■■■■□ 3.33
TTC3-223ENST00000492275 TNKS1BP1Q9C0C2 1729 aaKnown RBP35.86■■■■□ 3.33
TTC3-223ENST00000492275 UNC5CLQ8IV45 518 aa35.84■■■■□ 3.33
TTC3-223ENST00000492275 PRDM11Q9NQV5 511 aa35.84■■■■□ 3.33
TTC3-223ENST00000492275 USP54Q70EL1 1684 aa35.84■■■■□ 3.33
TTC3-223ENST00000492275 TRPC5Q9UL62 973 aaPredicted RBP35.83■■■■□ 3.33
TTC3-223ENST00000492275 ATRNO75882 1429 aa35.83■■■■□ 3.33
TTC3-223ENST00000492275 CHRNA2Q15822 529 aa35.82■■■■□ 3.32
TTC3-223ENST00000492275 CPDO75976 1380 aa35.81■■■■□ 3.32
TTC3-223ENST00000492275 RXRBP28702 533 aa35.81■■■■□ 3.32
TTC3-223ENST00000492275 CARD14Q9BXL6 1004 aa35.81■■■■□ 3.32
TTC3-223ENST00000492275 BTG4Q9NY30 223 aa35.79■■■■□ 3.32
TTC3-223ENST00000492275 NRAPQ86VF7 1730 aa35.79■■■■□ 3.32
TTC3-223ENST00000492275 RBM6P78332 1123 aaKnown RBP35.76■■■■□ 3.32
TTC3-223ENST00000492275 KCNH5Q8NCM2 988 aa35.76■■■■□ 3.32
TTC3-223ENST00000492275 KIF7Q2M1P5 1343 aa35.76■■■■□ 3.31
TTC3-223ENST00000492275 OVOS2A0A0J9YW53 1432 aa35.74■■■■□ 3.31
TTC3-223ENST00000492275 OVOS2Q6IE36 1432 aa35.74■■■■□ 3.31
TTC3-223ENST00000492275 NFAT5O94916 1531 aa35.73■■■■□ 3.31
TTC3-223ENST00000492275 SOX12O15370 315 aa35.73■■■■□ 3.31
TTC3-223ENST00000492275 LMO7Q8WWI1 1683 aa35.72■■■■□ 3.31
TTC3-223ENST00000492275 FYB1O15117 783 aa35.72■■■■□ 3.31
TTC3-223ENST00000492275 VPS72Q15906 364 aa35.71■■■■□ 3.31
TTC3-223ENST00000492275 GJD4Q96KN9 370 aaPredicted RBP35.71■■■■□ 3.31
TTC3-223ENST00000492275 CAMTA1Q9Y6Y1 1673 aa35.71■■■■□ 3.31
TTC3-223ENST00000492275 COL18A1P39060 1754 aa35.7■■■■□ 3.31
TTC3-223ENST00000492275 ARHGEF25Q86VW2 580 aa35.7■■■■□ 3.31
TTC3-223ENST00000492275 NSD3Q9BZ95 1437 aa35.7■■■■□ 3.31
TTC3-223ENST00000492275 KIF20BQ96Q89 1820 aa35.69■■■■□ 3.3
TTC3-223ENST00000492275 ZBTB7CA1YPR0 619 aa35.68■■■■□ 3.3
TTC3-223ENST00000492275 PANK3Q9H999 370 aa35.68■■■■□ 3.3
TTC3-223ENST00000492275 GLI3P10071 1580 aa35.67■■■■□ 3.3
TTC3-223ENST00000492275 CDK12Q9NYV4 1490 aaPredicted RBP35.67■■■■□ 3.3
TTC3-223ENST00000492275 AATKQ6ZMQ8 1374 aa35.66■■■■□ 3.3
TTC3-223ENST00000492275 COG3Q96JB2 828 aa35.66■■■■□ 3.3
TTC3-223ENST00000492275 GGNBP2Q9H3C7 697 aa35.66■■■■□ 3.3
TTC3-223ENST00000492275 RGPD5Q99666 1765 aa35.64■■■■□ 3.3
TTC3-223ENST00000492275 WASHC2AQ641Q2 1341 aa35.62■■■■□ 3.29
TTC3-223ENST00000492275 LTN1O94822 1766 aa35.62■■■■□ 3.29
TTC3-223ENST00000492275 STRN4Q9NRL3 753 aa35.62■■■■□ 3.29
TTC3-223ENST00000492275 AXIN2Q9Y2T1 843 aa35.62■■■■□ 3.29
TTC3-223ENST00000492275 CCDC9Q9Y3X0 531 aaKnown RBP35.62■■■■□ 3.29
TTC3-223ENST00000492275 CCDC7Q96M83 1385 aa35.62■■■■□ 3.29
TTC3-223ENST00000492275 RGS12O14924 1447 aa35.61■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms