RNA–Protein interactions for RNA: ENST00000491464.1

HDAC7-225, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-225ENST00000491464 CCDC61Q9Y6R9 512 aa14□□□□□ -0.17
HDAC7-225ENST00000491464 TRPM1Q7Z4N2 1603 aa13.99□□□□□ -0.17
HDAC7-225ENST00000491464 GLI3P10071 1580 aa13.99□□□□□ -0.17
HDAC7-225ENST00000491464 VPS72Q15906 364 aa13.98□□□□□ -0.17
HDAC7-225ENST00000491464 COL14A1Q05707 1796 aaKnown RBP13.98□□□□□ -0.17
HDAC7-225ENST00000491464 POLR3AO14802 1390 aaPredicted RBP13.97□□□□□ -0.17
HDAC7-225ENST00000491464 ROCK2O75116 1388 aaKnown RBP13.97□□□□□ -0.17
HDAC7-225ENST00000491464 ACEP12821 1306 aa13.97□□□□□ -0.17
HDAC7-225ENST00000491464 FAM83GA6ND36 823 aa13.97□□□□□ -0.17
HDAC7-225ENST00000491464 CRYBG1Q9Y4K1 1723 aa13.96□□□□□ -0.17
HDAC7-225ENST00000491464 PLEKHG3A1L390 1219 aa13.96□□□□□ -0.17
HDAC7-225ENST00000491464 NBPF8Q3BBV2 869 aa13.96□□□□□ -0.17
HDAC7-225ENST00000491464 PPIP5K1Q6PFW1 1433 aa13.96□□□□□ -0.18
HDAC7-225ENST00000491464 CABP2Q9NPB3 220 aa13.95□□□□□ -0.18
HDAC7-225ENST00000491464 PRDM11Q9NQV5 511 aa13.95□□□□□ -0.18
HDAC7-225ENST00000491464 BTG4Q9NY30 223 aa13.95□□□□□ -0.18
HDAC7-225ENST00000491464 NRAPQ86VF7 1730 aa13.95□□□□□ -0.18
HDAC7-225ENST00000491464 PHRF1Q9P1Y6 1649 aaKnown RBP13.94□□□□□ -0.18
HDAC7-225ENST00000491464 A0A0G2JS52 829 aa13.94□□□□□ -0.18
HDAC7-225ENST00000491464 MYT1Q01538 1121 aa13.94□□□□□ -0.18
HDAC7-225ENST00000491464 BRWD3Q6RI45 1802 aa13.94□□□□□ -0.18
HDAC7-225ENST00000491464 EVC2Q86UK5 1308 aa13.93□□□□□ -0.18
HDAC7-225ENST00000491464 NUTM2GQ5VZR2 741 aa13.93□□□□□ -0.18
HDAC7-225ENST00000491464 CCDC125Q86Z20 511 aa13.93□□□□□ -0.18
HDAC7-225ENST00000491464 SEPT12Q8IYM1 358 aa13.93□□□□□ -0.18
HDAC7-225ENST00000491464 ABTB2Q8N961 1025 aa13.93□□□□□ -0.18
HDAC7-225ENST00000491464 TONSLQ96HA7 1378 aa13.93□□□□□ -0.18
HDAC7-225ENST00000491464 EP400Q96L91 3159 aa13.93□□□□□ -0.18
HDAC7-225ENST00000491464 TRIM26Q12899 539 aaPredicted RBP13.92□□□□□ -0.18
HDAC7-225ENST00000491464 BRD4O60885 1362 aaPredicted RBP13.91□□□□□ -0.18
HDAC7-225ENST00000491464 KIAA0232Q92628 1395 aa13.91□□□□□ -0.18
HDAC7-225ENST00000491464 ONECUT3O60422 494 aaPredicted RBP13.9□□□□□ -0.18
HDAC7-225ENST00000491464 ZC3H6P61129 1189 aaKnown RBP13.9□□□□□ -0.18
HDAC7-225ENST00000491464 NLRP13Q86W25 1043 aa13.9□□□□□ -0.18
HDAC7-225ENST00000491464 CABP1Q9NZU7 370 aa13.9□□□□□ -0.18
HDAC7-225ENST00000491464 CHRNA2Q15822 529 aa13.89□□□□□ -0.19
HDAC7-225ENST00000491464 FAM98CQ17RN3 349 aaKnown RBP13.89□□□□□ -0.19
HDAC7-225ENST00000491464 KRT27Q7Z3Y8 459 aa13.89□□□□□ -0.19
HDAC7-225ENST00000491464 NRKQ7Z2Y5 1582 aa13.88□□□□□ -0.19
HDAC7-225ENST00000491464 SF3B2Q13435 895 aaKnown RBP13.88□□□□□ -0.19
HDAC7-225ENST00000491464 CARD11Q9BXL7 1154 aa13.88□□□□□ -0.19
HDAC7-225ENST00000491464 STRN4Q9NRL3 753 aa13.88□□□□□ -0.19
HDAC7-225ENST00000491464 USP6P35125 1406 aa13.88□□□□□ -0.19
HDAC7-225ENST00000491464 BLMP54132 1417 aaPredicted RBP13.88□□□□□ -0.19
HDAC7-225ENST00000491464 USP19O94966 1318 aa13.88□□□□□ -0.19
HDAC7-225ENST00000491464 SPATA31A5Q5VU36 1347 aa13.88□□□□□ -0.19
HDAC7-225ENST00000491464 SPATA31A7Q8IWB4 1347 aa13.88□□□□□ -0.19
HDAC7-225ENST00000491464 EVA1CP58658 441 aa13.86□□□□□ -0.19
HDAC7-225ENST00000491464 CPDO75976 1380 aa13.85□□□□□ -0.19
HDAC7-225ENST00000491464 NLRP6P59044 892 aa13.85□□□□□ -0.19
HDAC7-225ENST00000491464 ZNF692Q9BU19 519 aaPredicted RBP13.85□□□□□ -0.19
HDAC7-225ENST00000491464 SBNO2Q9Y2G9 1366 aa13.84□□□□□ -0.19
HDAC7-225ENST00000491464 AKAP12Q02952 1782 aa13.84□□□□□ -0.19
HDAC7-225ENST00000491464 GCP02774 474 aa13.84□□□□□ -0.19
HDAC7-225ENST00000491464 ZRANB1Q9UGI0 708 aa13.84□□□□□ -0.19
HDAC7-225ENST00000491464 SPATA31A1Q5TZJ5 1347 aa13.84□□□□□ -0.19
HDAC7-225ENST00000491464 SSH2Q76I76 1423 aa13.83□□□□□ -0.2
HDAC7-225ENST00000491464 THSD7AQ9UPZ6 1657 aa13.83□□□□□ -0.2
HDAC7-225ENST00000491464 ZBTB7CA1YPR0 619 aa13.83□□□□□ -0.2
HDAC7-225ENST00000491464 USP35Q9P2H5 1018 aa13.82□□□□□ -0.2
HDAC7-225ENST00000491464 PIK3C2AO00443 1686 aa13.82□□□□□ -0.2
HDAC7-225ENST00000491464 LMO7Q8WWI1 1683 aa13.82□□□□□ -0.2
HDAC7-225ENST00000491464 CAMTA1Q9Y6Y1 1673 aa13.82□□□□□ -0.2
HDAC7-225ENST00000491464 TTC21AQ8NDW8 1320 aa13.81□□□□□ -0.2
HDAC7-225ENST00000491464 KTN1Q86UP2 1357 aaKnown RBP13.81□□□□□ -0.2
HDAC7-225ENST00000491464 SLIT3O75094 1523 aa13.8□□□□□ -0.2
HDAC7-225ENST00000491464 DEFB132Q7Z7B7 95 aa13.8□□□□□ -0.2
HDAC7-225ENST00000491464 TTC21BQ7Z4L5 1316 aa13.8□□□□□ -0.2
HDAC7-225ENST00000491464 RGPD1P0DJD0 1748 aa13.79□□□□□ -0.2
HDAC7-225ENST00000491464 BAG6P46379 1132 aa13.79□□□□□ -0.2
HDAC7-225ENST00000491464 LARP1Q6PKG0 1096 aaKnown RBP13.79□□□□□ -0.2
HDAC7-225ENST00000491464 BARGINQ6ZT62 677 aa13.79□□□□□ -0.2
HDAC7-225ENST00000491464 TCP11L2Q8N4U5 519 aa13.79□□□□□ -0.2
HDAC7-225ENST00000491464 KCNH5Q8NCM2 988 aa13.79□□□□□ -0.2
HDAC7-225ENST00000491464 MON2Q7Z3U7 1717 aa13.78□□□□□ -0.2
HDAC7-225ENST00000491464 TMC1Q8TDI8 760 aa13.78□□□□□ -0.2
HDAC7-225ENST00000491464 THRAP3Q9Y2W1 955 aaKnown RBP13.78□□□□□ -0.2
HDAC7-225ENST00000491464 AATKQ6ZMQ8 1374 aa13.78□□□□□ -0.2
HDAC7-225ENST00000491464 CPSF1Q10570 1443 aaKnown RBP13.78□□□□□ -0.2
HDAC7-225ENST00000491464 COL5A2P05997 1499 aaPredicted RBP13.78□□□□□ -0.2
HDAC7-225ENST00000491464 PDE3BQ13370 1112 aa13.77□□□□□ -0.21
HDAC7-225ENST00000491464 FAM182BQ5T319 152 aa13.77□□□□□ -0.21
HDAC7-225ENST00000491464 HDGFL2Q7Z4V5 671 aaPredicted RBP13.77□□□□□ -0.21
HDAC7-225ENST00000491464 CRB1P82279 1406 aa13.76□□□□□ -0.21
HDAC7-225ENST00000491464 SOX12O15370 315 aa13.76□□□□□ -0.21
HDAC7-225ENST00000491464 SLC24A1O60721 1099 aa13.76□□□□□ -0.21
HDAC7-225ENST00000491464 FAM196AQ6ZSG2 479 aa13.76□□□□□ -0.21
HDAC7-225ENST00000491464 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.75□□□□□ -0.21
HDAC7-225ENST00000491464 TERF2IPQ9NYB0 399 aa13.75□□□□□ -0.21
HDAC7-225ENST00000491464 TOM1L2Q6ZVM7 507 aa13.74□□□□□ -0.21
HDAC7-225ENST00000491464 PUS7Q96PZ0 661 aaKnown RBP13.74□□□□□ -0.21
HDAC7-225ENST00000491464 COL18A1P39060 1754 aa13.73□□□□□ -0.21
HDAC7-225ENST00000491464 PARP4Q9UKK3 1724 aaKnown RBP13.73□□□□□ -0.21
HDAC7-225ENST00000491464 ST20-MTHFSA0A0A6YYL1 179 aa13.73□□□□□ -0.21
HDAC7-225ENST00000491464 ARHGEF25Q86VW2 580 aa13.73□□□□□ -0.21
HDAC7-225ENST00000491464 SLC12A5Q9H2X9 1139 aa13.73□□□□□ -0.21
HDAC7-225ENST00000491464 TNS1Q9HBL0 1735 aaKnown RBP13.73□□□□□ -0.21
HDAC7-225ENST00000491464 EDC4Q6P2E9 1401 aaKnown RBP13.73□□□□□ -0.21
HDAC7-225ENST00000491464 NINLQ9Y2I6 1382 aa13.72□□□□□ -0.21
HDAC7-225ENST00000491464 WDR17Q8IZU2 1322 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms